RNA–Protein interactions for RNA: ENST00000398427.6

PPME1-202, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best) BASIC

Gene PPME1, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-202ENST00000398427 ADAMTS3O15072 1205 aa13.11□□□□□ -0.31
PPME1-202ENST00000398427 TRPA1O75762 1119 aa13.11□□□□□ -0.31
PPME1-202ENST00000398427 SYT1P21579 422 aa13.11□□□□□ -0.31
PPME1-202ENST00000398427 TRAF1Q13077 416 aa13.11□□□□□ -0.31
PPME1-202ENST00000398427 NPY5RQ15761 445 aa13.11□□□□□ -0.31
PPME1-202ENST00000398427 FBXO18Q8NFZ0 1043 aa13.11□□□□□ -0.31
PPME1-202ENST00000398427 TRERF1Q96PN7 1200 aa13.11□□□□□ -0.31
PPME1-202ENST00000398427 PHF20Q9BVI0 1012 aa13.11□□□□□ -0.31
PPME1-202ENST00000398427 CWC22Q9HCG8 908 aaKnown RBP13.11□□□□□ -0.31
PPME1-202ENST00000398427 PNMA2Q9UL42 364 aa13.11□□□□□ -0.31
PPME1-202ENST00000398427 TBC1D8O95759 1140 aa13.11□□□□□ -0.31
PPME1-202ENST00000398427 XBP1P17861 261 aa13.11□□□□□ -0.31
PPME1-202ENST00000398427 DDIT3P35638 169 aa13.11□□□□□ -0.31
PPME1-202ENST00000398427 CSPP1Q1MSJ5 1256 aa13.11□□□□□ -0.31
PPME1-202ENST00000398427 CCDC148Q8NFR7 591 aa13.11□□□□□ -0.31
PPME1-202ENST00000398427 CFHR5Q9BXR6 569 aa13.11□□□□□ -0.31
PPME1-202ENST00000398427 ZMYND12Q9H0C1 365 aa13.11□□□□□ -0.31
PPME1-202ENST00000398427 MRPL11Q9Y3B7 192 aaKnown RBP13.11□□□□□ -0.31
PPME1-202ENST00000398427 ESYT2A0FGR8 921 aa13.1□□□□□ -0.31
PPME1-202ENST00000398427 SMCO2A6NFE2 343 aa13.1□□□□□ -0.31
PPME1-202ENST00000398427 ERCC3P19447 782 aa13.1□□□□□ -0.31
PPME1-202ENST00000398427 PKP1Q13835 747 aa13.1□□□□□ -0.31
PPME1-202ENST00000398427 NCAPG2Q86XI2 1143 aa13.1□□□□□ -0.31
PPME1-202ENST00000398427 CCDC12Q8WUD4 166 aaPredicted RBP13.1□□□□□ -0.31
PPME1-202ENST00000398427 MMP1P03956 469 aa13.1□□□□□ -0.31
PPME1-202ENST00000398427 PDCP20941 246 aa13.1□□□□□ -0.31
PPME1-202ENST00000398427 NLRP5P59047 1200 aa13.1□□□□□ -0.31
PPME1-202ENST00000398427 TRIM29Q14134 588 aa13.1□□□□□ -0.31
PPME1-202ENST00000398427 TKFCQ3LXA3 575 aa13.1□□□□□ -0.31
PPME1-202ENST00000398427 TBC1D5Q92609 795 aa13.1□□□□□ -0.31
PPME1-202ENST00000398427 EFCC1Q9HA90 598 aa13.1□□□□□ -0.31
PPME1-202ENST00000398427 PLXNB2O15031 1838 aa13.09□□□□□ -0.31
PPME1-202ENST00000398427 SLC25A27O95847 323 aa13.09□□□□□ -0.31
PPME1-202ENST00000398427 CCNA1P78396 465 aa13.09□□□□□ -0.31
PPME1-202ENST00000398427 FAM177A1Q8N128 213 aaPredicted RBP13.09□□□□□ -0.31
PPME1-202ENST00000398427 SHCBP1Q8NEM2 672 aa13.09□□□□□ -0.31
PPME1-202ENST00000398427 CHST13Q8NET6 341 aa13.09□□□□□ -0.31
PPME1-202ENST00000398427 OXER1Q8TDS5 423 aa13.09□□□□□ -0.31
PPME1-202ENST00000398427 ACAD9Q9H845 621 aa13.09□□□□□ -0.31
PPME1-202ENST00000398427 PSTPIP2Q9H939 334 aa13.09□□□□□ -0.31
PPME1-202ENST00000398427 RIC8AQ9NPQ8 531 aa13.09□□□□□ -0.31
PPME1-202ENST00000398427 ZSWIM8A7E2V4 1837 aa13.09□□□□□ -0.31
PPME1-202ENST00000398427 LCTP09848 1927 aa13.09□□□□□ -0.31
PPME1-202ENST00000398427 VPS37CA5D8V6 355 aaPredicted RBP13.08□□□□□ -0.31
PPME1-202ENST00000398427 H3BQV1 296 aa13.08□□□□□ -0.31
PPME1-202ENST00000398427 STX6O43752 255 aa13.08□□□□□ -0.31
PPME1-202ENST00000398427 ADCY7P51828 1080 aa13.08□□□□□ -0.31
PPME1-202ENST00000398427 UBE2SQ16763 222 aa13.08□□□□□ -0.31
PPME1-202ENST00000398427 IFFO2Q5TF58 517 aa13.08□□□□□ -0.31
PPME1-202ENST00000398427 ZNF710Q8N1W2 664 aa13.08□□□□□ -0.31
PPME1-202ENST00000398427 C6orf50Q9HD87 102 aa13.08□□□□□ -0.31
PPME1-202ENST00000398427 PCDHA4Q9UN74 947 aa13.08□□□□□ -0.31
PPME1-202ENST00000398427 MTMR6Q9Y217 621 aa13.08□□□□□ -0.31
PPME1-202ENST00000398427 MGAMO43451 1857 aa13.08□□□□□ -0.32
PPME1-202ENST00000398427 MEIS2O14770 477 aa13.08□□□□□ -0.32
PPME1-202ENST00000398427 CFBP00751 764 aa13.08□□□□□ -0.32
PPME1-202ENST00000398427 SKOR2Q2VWA4 1001 aaPredicted RBP13.08□□□□□ -0.32
PPME1-202ENST00000398427 USP17L6PQ6QN14 398 aa13.08□□□□□ -0.32
PPME1-202ENST00000398427 DAGLBQ8NCG7 672 aa13.08□□□□□ -0.32
PPME1-202ENST00000398427 RASGRP4Q8TDF6 673 aa13.08□□□□□ -0.32
PPME1-202ENST00000398427 CUL5Q93034 780 aa13.08□□□□□ -0.32
PPME1-202ENST00000398427 MROH8Q9H579 483 aa13.08□□□□□ -0.32
PPME1-202ENST00000398427 CALML3P27482 149 aa13.07□□□□□ -0.32
PPME1-202ENST00000398427 GNA11P29992 359 aa13.07□□□□□ -0.32
PPME1-202ENST00000398427 HOXA13P31271 388 aaPredicted RBP13.07□□□□□ -0.32
PPME1-202ENST00000398427 COPB2P35606 906 aa13.07□□□□□ -0.32
PPME1-202ENST00000398427 GHRHRQ02643 423 aa13.07□□□□□ -0.32
PPME1-202ENST00000398427 MAP2K1Q02750 393 aaPredicted RBP13.07□□□□□ -0.32
PPME1-202ENST00000398427 WDR78Q5VTH9 848 aa13.07□□□□□ -0.32
PPME1-202ENST00000398427 NSMFQ6X4W1 530 aa13.07□□□□□ -0.32
PPME1-202ENST00000398427 DIS3L2Q8IYB7 885 aaKnown RBP13.07□□□□□ -0.32
PPME1-202ENST00000398427 SECISBP2LQ93073 1101 aaKnown RBP13.07□□□□□ -0.32
PPME1-202ENST00000398427 A1CFQ9NQ94 594 aaKnown RBP13.07□□□□□ -0.32
PPME1-202ENST00000398427 SAGE1Q9NXZ1 904 aa13.07□□□□□ -0.32
PPME1-202ENST00000398427 FBXO40Q9UH90 709 aa13.07□□□□□ -0.32
PPME1-202ENST00000398427 BTBD18B2RXH4 712 aa13.07□□□□□ -0.32
PPME1-202ENST00000398427 M0R2N6 131 aa13.07□□□□□ -0.32
PPME1-202ENST00000398427 ECM2O94769 699 aaPredicted RBP13.07□□□□□ -0.32
PPME1-202ENST00000398427 CLK2P49760 499 aaKnown RBP13.07□□□□□ -0.32
PPME1-202ENST00000398427 HSD17B4P51659 736 aa13.07□□□□□ -0.32
PPME1-202ENST00000398427 NR5A1Q13285 461 aa13.07□□□□□ -0.32
PPME1-202ENST00000398427 GALNT17Q6IS24 598 aa13.07□□□□□ -0.32
PPME1-202ENST00000398427 SLC30A10Q6XR72 485 aa13.07□□□□□ -0.32
PPME1-202ENST00000398427 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.07□□□□□ -0.32
PPME1-202ENST00000398427 BLIDQ8IZY5 108 aa13.07□□□□□ -0.32
PPME1-202ENST00000398427 RGS22Q8NE09 1264 aa13.07□□□□□ -0.32
PPME1-202ENST00000398427 CGNQ9P2M7 1197 aaKnown RBP13.07□□□□□ -0.32
PPME1-202ENST00000398427 DOCK3Q8IZD9 2030 aa13.07□□□□□ -0.32
PPME1-202ENST00000398427 ZNFX1Q9P2E3 1918 aaKnown RBP13.07□□□□□ -0.32
PPME1-202ENST00000398427 KIF28PB7ZC32 967 aa13.06□□□□□ -0.32
PPME1-202ENST00000398427 PIK3CDO00329 1044 aa13.06□□□□□ -0.32
PPME1-202ENST00000398427 KRT2P35908 639 aa13.06□□□□□ -0.32
PPME1-202ENST00000398427 MRPL12P52815 198 aaKnown RBP13.06□□□□□ -0.32
PPME1-202ENST00000398427 RPS6P62753 249 aaKnown RBP13.06□□□□□ -0.32
PPME1-202ENST00000398427 DNTTIP2Q5QJE6 756 aaKnown RBP13.06□□□□□ -0.32
PPME1-202ENST00000398427 RNF207Q6ZRF8 634 aa13.06□□□□□ -0.32
PPME1-202ENST00000398427 GPR142Q7Z601 462 aa13.06□□□□□ -0.32
PPME1-202ENST00000398427 MCF2L2Q86YR7 1114 aa13.06□□□□□ -0.32
PPME1-202ENST00000398427 REXO1Q8N1G1 1221 aaKnown RBP13.06□□□□□ -0.32
PPME1-202ENST00000398427 TMEM260Q9NX78 707 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms