RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 KCTD15Q96SI1 283 aaPredicted RBP4.47□□□□□ -1.69
UBE3A-202ENST00000397954 PUS3Q9BZE2 481 aaKnown RBP4.47□□□□□ -1.69
UBE3A-202ENST00000397954 ST7Q9NRC1 585 aa4.47□□□□□ -1.69
UBE3A-202ENST00000397954 PICK1Q9NRD5 415 aa4.47□□□□□ -1.69
UBE3A-202ENST00000397954 TCP11L1Q9NUJ3 509 aa4.47□□□□□ -1.69
UBE3A-202ENST00000397954 PAG1Q9NWQ8 432 aa4.47□□□□□ -1.69
UBE3A-202ENST00000397954 SIRPGQ9P1W8 387 aa4.47□□□□□ -1.69
UBE3A-202ENST00000397954 MORF4L1Q9UBU8 362 aa4.47□□□□□ -1.69
UBE3A-202ENST00000397954 PNMA6EA0A0J9YXQ4 647 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 BACH1O14867 736 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 FKTNO75072 461 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 USP2O75604 605 aaPredicted RBP4.46□□□□□ -1.7
UBE3A-202ENST00000397954 MCAMP43121 646 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 BTDP43251 543 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 PHKA1P46020 1223 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 MASP1P48740 699 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 VEGFBP49765 207 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 ZNF157P51786 506 aaPredicted RBP4.46□□□□□ -1.7
UBE3A-202ENST00000397954 RCAN1P53805 252 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 ERVK-9P63128 1117 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 MECOMQ03112 1051 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 BIRC2Q13490 618 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 TBC1D10BQ4KMP7 808 aaPredicted RBP4.46□□□□□ -1.7
UBE3A-202ENST00000397954 TMEM179Q6ZVK1 233 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 FAM169BQ8N8A8 192 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 RUFY2Q8WXA3 655 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 SOCS4Q8WXH5 440 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 CHMP4CQ96CF2 233 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 SEC16BQ96JE7 1060 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 RNF41Q9H4P4 317 aaPredicted RBP4.46□□□□□ -1.7
UBE3A-202ENST00000397954 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.46□□□□□ -1.7
UBE3A-202ENST00000397954 PCDH10Q9P2E7 1040 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 LRP2BPQ9P2M1 347 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 DBNLQ9UJU6 430 aaKnown RBP4.46□□□□□ -1.7
UBE3A-202ENST00000397954 PRKAB1Q9Y478 270 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 PLXNA1Q9UIW2 1896 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 NR1I2O75469 434 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 TAF5LO75529 589 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 USP5P45974 858 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 NOVP48745 357 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 BCAMP50895 628 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 MAP1SQ66K74 1059 aaPredicted RBP4.46□□□□□ -1.7
UBE3A-202ENST00000397954 FBXO46Q6PJ61 603 aaPredicted RBP4.46□□□□□ -1.7
UBE3A-202ENST00000397954 AACSQ86V21 672 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 TXNRD3Q86VQ6 643 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 PRPF38AQ8NAV1 312 aaKnown RBP4.46□□□□□ -1.7
UBE3A-202ENST00000397954 CCDC74AQ96AQ1 378 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 MYO19Q96H55 970 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 MAP3K14Q99558 947 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 GLIS2Q9BZE0 524 aaPredicted RBP4.46□□□□□ -1.7
UBE3A-202ENST00000397954 KIAA1683Q9H0B3 1180 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 NPHS2Q9NP85 383 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 USP40Q9NVE5 1235 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 SLC5A4Q9NY91 659 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 MAP3K20Q9NYL2 800 aaKnown RBP4.46□□□□□ -1.7
UBE3A-202ENST00000397954 CNTN3Q9P232 1028 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 AGTPBP1Q9UPW5 1226 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 HCN4Q9Y3Q4 1203 aa4.46□□□□□ -1.7
UBE3A-202ENST00000397954 A0A0U1RQG5 324 aaPredicted RBP4.45□□□□□ -1.7
UBE3A-202ENST00000397954 TCRBV5S4A2TA0A5A2 114 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 A6NJY4 79 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 ATP2A1O14983 1001 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 CPNE3O75131 537 aaKnown RBP4.45□□□□□ -1.7
UBE3A-202ENST00000397954 HSPA1AP0DMV8 641 aaKnown RBP4.45□□□□□ -1.7
UBE3A-202ENST00000397954 HSPA1BP0DMV9 641 aaKnown RBP4.45□□□□□ -1.7
UBE3A-202ENST00000397954 CCNA1P78396 465 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 C21orf62-AS1Q17RA5 79 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 OLFM4Q6UX06 510 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 TEX11Q8IYF3 940 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 SLKQ9H2G2 1235 aaPredicted RBP4.45□□□□□ -1.7
UBE3A-202ENST00000397954 CABP5Q9NP86 173 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 CTNNA3Q9UI47 895 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 USP20Q9Y2K6 914 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 DIS3Q9Y2L1 958 aaKnown RBP4.45□□□□□ -1.7
UBE3A-202ENST00000397954 FLT1P17948 1338 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 PHF20L1A8MW92 1017 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 BHMG1C9JSJ3 638 aaPredicted RBP4.45□□□□□ -1.7
UBE3A-202ENST00000397954 PRC1O43663 620 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 ORC4O43929 436 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 FBXO24O75426 580 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 CAP2P40123 477 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 PSMA6P60900 246 aaKnown RBP4.45□□□□□ -1.7
UBE3A-202ENST00000397954 NUCB1Q02818 461 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 GABPAQ06546 454 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 SEPT6Q14141 434 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 LRRC41Q15345 812 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 FAM110CQ1W6H9 321 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 TSHZ1Q6ZSZ6 1077 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 C16orf86Q6ZW13 317 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 CENPQQ7L2Z9 268 aaPredicted RBP4.45□□□□□ -1.7
UBE3A-202ENST00000397954 ALDH16A1Q8IZ83 802 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 PRMT6Q96LA8 375 aaPredicted RBP4.45□□□□□ -1.7
UBE3A-202ENST00000397954 RIOK1Q9BRS2 568 aaKnown RBP4.45□□□□□ -1.7
UBE3A-202ENST00000397954 C1QTNF2Q9BXJ5 285 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 CNNM2Q9H8M5 875 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 ARHGEF10LQ9HCE6 1279 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 UBP1Q9NZI7 540 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 SNCAIPQ9Y6H5 919 aa4.45□□□□□ -1.7
UBE3A-202ENST00000397954 BAZ2AQ9UIF9 1905 aaKnown RBP4.44□□□□□ -1.7
UBE3A-202ENST00000397954 ARHGAP33O14559 1287 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms