RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 THEMIS2Q5TEJ8 643 aa12.74□□□□□ -0.37
PUM3-202ENST00000397885 ZNF790Q6PG37 636 aa12.74□□□□□ -0.37
PUM3-202ENST00000397885 MTHFD1LQ6UB35 978 aa12.74□□□□□ -0.37
PUM3-202ENST00000397885 DNAJC7Q99615 494 aa12.74□□□□□ -0.37
PUM3-202ENST00000397885 HAUS7Q99871 368 aa12.74□□□□□ -0.37
PUM3-202ENST00000397885 PAPOLBQ9NRJ5 636 aaKnown RBP12.74□□□□□ -0.37
PUM3-202ENST00000397885 SLC5A4Q9NY91 659 aa12.74□□□□□ -0.37
PUM3-202ENST00000397885 TRIM10Q9UDY6 481 aa12.74□□□□□ -0.37
PUM3-202ENST00000397885 SH2B2O14492 632 aaPredicted RBP12.73□□□□□ -0.37
PUM3-202ENST00000397885 MYL6BP14649 208 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 TCP1P17987 556 aaKnown RBP12.73□□□□□ -0.37
PUM3-202ENST00000397885 RBM5P52756 815 aaKnown RBP eCLIP12.73□□□□□ -0.37
PUM3-202ENST00000397885 PAK2Q13177 524 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 SNX1Q13596 522 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 GPR162Q16538 588 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 HIBCHQ6NVY1 386 aaPredicted RBP12.73□□□□□ -0.37
PUM3-202ENST00000397885 SMIM5Q71RC9 77 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 WHAMMQ8TF30 809 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 XAGE3Q8WTP9 111 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 TBC1D31Q96DN5 1066 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 CCDC43Q96MW1 224 aaKnown RBP12.73□□□□□ -0.37
PUM3-202ENST00000397885 JADE2Q9NQC1 790 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 GDF3Q9NR23 364 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 GOLGA6L10A6NI86 522 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 OPLAHO14841 1288 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 IFIT3O14879 490 aaKnown RBP12.73□□□□□ -0.37
PUM3-202ENST00000397885 IMPDH2P12268 514 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 CCND1P24385 295 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 CYLC1P35663 651 aaPredicted RBP12.73□□□□□ -0.37
PUM3-202ENST00000397885 TFCP2Q12800 502 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 MTA1Q13330 715 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 BIRC3Q13489 604 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 LAMB3Q13751 1172 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 SPRED3Q2MJR0 410 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 TSR1Q2NL82 804 aaKnown RBP12.73□□□□□ -0.37
PUM3-202ENST00000397885 HAUS3Q68CZ6 603 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 GALNT15Q8N3T1 639 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 CCDC155Q8N6L0 562 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 EIF1ADQ8N9N8 165 aaKnown RBP12.73□□□□□ -0.37
PUM3-202ENST00000397885 HDAC7Q8WUI4 952 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 NUP133Q8WUM0 1156 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 EZH1Q92800 747 aaPredicted RBP12.73□□□□□ -0.37
PUM3-202ENST00000397885 EDC3Q96F86 508 aaKnown RBP12.73□□□□□ -0.37
PUM3-202ENST00000397885 ZNF570Q96NI8 536 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 TMBIM4Q9HC24 238 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 PPANQ9NQ55 473 aaKnown RBP12.73□□□□□ -0.37
PUM3-202ENST00000397885 SLC12A6Q9UHW9 1150 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 WDR19Q8NEZ3 1342 aa12.73□□□□□ -0.37
PUM3-202ENST00000397885 B4DLN1 442 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 PDLIM1O00151 329 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 N4BP3O15049 544 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 ZNF185O15231 689 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 CRKLP46109 303 aaKnown RBP12.72□□□□□ -0.37
PUM3-202ENST00000397885 LMNB2Q03252 620 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 PPP1R7Q15435 360 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 CCDC129Q6ZRS4 1044 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 TRIM74Q86UV6 250 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 TRIM73Q86UV7 250 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 NLGN1Q8N2Q7 840 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 CCDC63Q8NA47 563 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 ARHGEF1Q92888 912 aaKnown RBP12.72□□□□□ -0.37
PUM3-202ENST00000397885 TSC22D3Q99576 134 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 CHP1Q99653 195 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 NDST4Q9H3R1 872 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 ZFATQ9P243 1243 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 RNF14Q9UBS8 474 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 SWAP70Q9UH65 585 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 SLC12A4Q9UP95 1085 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 MYH14Q7Z406 1995 aaKnown RBP12.72□□□□□ -0.37
PUM3-202ENST00000397885 GOLGA6L10A0A0M3HER8 536 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 STXBP3O00186 592 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 CDKL5O76039 1030 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 LINGO3P0C6S8 592 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 PTPREP23469 700 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 RFC4P35249 363 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 PTPN12Q05209 780 aaKnown RBP12.72□□□□□ -0.37
PUM3-202ENST00000397885 BYSLQ13895 437 aaKnown RBP12.72□□□□□ -0.37
PUM3-202ENST00000397885 SEPT2Q15019 361 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 CDC37Q16543 378 aaPredicted RBP12.72□□□□□ -0.37
PUM3-202ENST00000397885 MEA1Q16626 185 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 CCDC57Q2TAC2 916 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 RABL6Q3YEC7 729 aaPredicted RBP12.72□□□□□ -0.37
PUM3-202ENST00000397885 EPHA10Q5JZY3 1008 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 ANKRD13DQ6ZTN6 518 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 COPS6Q7L5N1 327 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 KBTBD3Q8NAB2 608 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 NLGN2Q8NFZ4 835 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 PIK3R5Q8WYR1 880 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 YIPF3Q9GZM5 350 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 SERTAD1Q9UHV2 236 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 HPS5Q9UPZ3 1129 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 CHD4Q14839 1912 aa12.72□□□□□ -0.37
PUM3-202ENST00000397885 AFDNP55196 1824 aaKnown RBP12.72□□□□□ -0.37
PUM3-202ENST00000397885 MYH8P13535 1937 aa12.71□□□□□ -0.37
PUM3-202ENST00000397885 CCT8L1PA6NM43 557 aa12.71□□□□□ -0.37
PUM3-202ENST00000397885 POLR2DO15514 142 aaKnown RBP12.71□□□□□ -0.37
PUM3-202ENST00000397885 ACTN4O43707 911 aaKnown RBP12.71□□□□□ -0.37
PUM3-202ENST00000397885 KRT31Q15323 416 aa12.71□□□□□ -0.37
PUM3-202ENST00000397885 IMMTQ16891 758 aaKnown RBP12.71□□□□□ -0.37
PUM3-202ENST00000397885 C8orf74Q6P047 294 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms