RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 TGFBRAP1Q8WUH2 860 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 TAOK3Q9H2K8 898 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 VCPKMTQ9H867 229 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 BZW2Q9Y6E2 419 aaKnown RBP6.58□□□□□ -1.36
PTPRD-206ENST00000397617 P4HA2O15460 535 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 PPP2R5EQ16537 467 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 PDXDC2PQ6P474 469 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 NYAP1Q6ZVC0 841 aa6.58□□□□□ -1.36
PTPRD-206ENST00000397617 SH3RF3Q8TEJ3 882 aaPredicted RBP6.58□□□□□ -1.36
PTPRD-206ENST00000397617 KIF28PB7ZC32 967 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 CTNND1O60716 968 aaKnown RBP6.57□□□□□ -1.36
PTPRD-206ENST00000397617 VWA3BQ502W6 1294 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 CERS5Q8N5B7 392 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 MYRIPQ8NFW9 859 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 DNAJC25Q9H1X3 360 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 KCNMB3Q9NPA1 279 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 ANO9A1A5B4 782 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 SMCO2A6NFE2 343 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 POTEB2H3BUK9 544 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 RRP9O43818 475 aaKnown RBP6.57□□□□□ -1.36
PTPRD-206ENST00000397617 DYNLL1P63167 89 aaKnown RBP6.57□□□□□ -1.36
PTPRD-206ENST00000397617 C10orf76Q5T2E6 689 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 CDC42EP5Q6NZY7 148 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 FAM173BQ6P4H8 233 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 RNF10Q8N5U6 811 aaKnown RBP6.57□□□□□ -1.36
PTPRD-206ENST00000397617 PBX1P40424 430 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 TBX2Q13207 712 aaPredicted RBP6.57□□□□□ -1.36
PTPRD-206ENST00000397617 ABCB5Q2M3G0 1257 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 TSR1Q2NL82 804 aaKnown RBP6.57□□□□□ -1.36
PTPRD-206ENST00000397617 TUFT1Q9NNX1 390 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 ATF5Q9Y2D1 282 aaPredicted RBP6.57□□□□□ -1.36
PTPRD-206ENST00000397617 MYH9P35579 1960 aaKnown RBP6.57□□□□□ -1.36
PTPRD-206ENST00000397617 SPDYE3A6NKU9 549 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 DPCR1Q3MIW9 517 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 SLFN13Q68D06 897 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 EIF1ADQ8N9N8 165 aaKnown RBP6.57□□□□□ -1.36
PTPRD-206ENST00000397617 JAKMIP2Q96AA8 810 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 TBC1D22BQ9NU19 505 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 CTIFO43310 598 aaKnown RBP6.57□□□□□ -1.36
PTPRD-206ENST00000397617 FANCCQ00597 558 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 NOL9Q5SY16 702 aaKnown RBP6.57□□□□□ -1.36
PTPRD-206ENST00000397617 LRRC8AQ8IWT6 810 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 VPS54Q9P1Q0 977 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 ZNF112Q9UJU3 913 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 ODF2LQ9ULJ1 636 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 PLAGL2Q9UPG8 496 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 PCDHA1Q9Y5I3 950 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 CLIC4Q9Y696 253 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 POLR2DO15514 142 aaKnown RBP6.57□□□□□ -1.36
PTPRD-206ENST00000397617 NR5A1Q13285 461 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 LRWD1Q9UFC0 647 aa6.57□□□□□ -1.36
PTPRD-206ENST00000397617 STAT6P42226 847 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 PAK1Q13153 545 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 MAPKAPK5Q8IW41 473 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 MNS1Q8NEH6 495 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 GOPCQ9HD26 462 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 FEM1BQ9UK73 627 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 F5H6K3 240 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 SNAP23O00161 211 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 EIF3DO15371 548 aaKnown RBP eCLIP6.56□□□□□ -1.36
PTPRD-206ENST00000397617 CCDC172P0C7W6 258 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 UBASH3AP57075 661 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 KLRC3Q07444 240 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 COL9A3Q14050 684 aaPredicted RBP6.56□□□□□ -1.36
PTPRD-206ENST00000397617 CKAP2LQ8IYA6 745 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 CCAR2Q8N163 923 aaKnown RBP6.56□□□□□ -1.36
PTPRD-206ENST00000397617 PPP1R12BO60237 982 aaPredicted RBP6.56□□□□□ -1.36
PTPRD-206ENST00000397617 SFNP31947 248 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 TMEM119Q4V9L6 283 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 LGALS16A8MUM7 142 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 MCM3P25205 808 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 ZBED6P86452 979 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 LBX2Q6XYB7 198 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 RNF214Q8ND24 703 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 LARP4BQ92615 738 aaKnown RBP6.56□□□□□ -1.36
PTPRD-206ENST00000397617 AS3MTQ9HBK9 375 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 SYNRGQ9UMZ2 1314 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 PRDM1O75626 825 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 SKILP12757 684 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 NR1I3Q14994 352 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 SV2BQ7L1I2 683 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 CCDC65Q8IXS2 484 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 PSTPIP2Q9H939 334 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 PCDHB6Q9Y5E3 794 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 GAS2O43903 313 aaKnown RBP6.56□□□□□ -1.36
PTPRD-206ENST00000397617 ECE2O60344 883 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 KRT83P78385 493 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 B3GNT9Q6UX72 402 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 DHX38Q92620 1227 aaKnown RBP6.56□□□□□ -1.36
PTPRD-206ENST00000397617 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.56□□□□□ -1.36
PTPRD-206ENST00000397617 PPIP5K2O43314 1243 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 ZNF827Q17R98 1081 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 TSKSQ9UJT2 592 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 COL4A3BPQ9Y5P4 624 aa6.56□□□□□ -1.36
PTPRD-206ENST00000397617 ATAD5Q96QE3 1844 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 FAM177BA6PVY3 158 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 MEIS1O00470 390 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 PDXKO00764 312 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 PRLRP16471 622 aa6.55□□□□□ -1.36
PTPRD-206ENST00000397617 OR8K1Q8NGG5 319 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms