RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 ICAM1P05362 532 aa19.42■□□□□ 0.7
TSPAN4-205ENST00000397406 TAL1P17542 331 aaPredicted RBP19.42■□□□□ 0.7
TSPAN4-205ENST00000397406 GNA11P29992 359 aa19.42■□□□□ 0.7
TSPAN4-205ENST00000397406 DNM1Q05193 864 aaKnown RBP19.42■□□□□ 0.7
TSPAN4-205ENST00000397406 TRAF1Q13077 416 aa19.42■□□□□ 0.7
TSPAN4-205ENST00000397406 GNL2Q13823 731 aaKnown RBP19.42■□□□□ 0.7
TSPAN4-205ENST00000397406 USH1GQ495M9 461 aa19.42■□□□□ 0.7
TSPAN4-205ENST00000397406 ANKRD13CQ8N6S4 541 aa19.42■□□□□ 0.7
TSPAN4-205ENST00000397406 ASCC2Q9H1I8 757 aaPredicted RBP19.42■□□□□ 0.7
TSPAN4-205ENST00000397406 RIC8AQ9NPQ8 531 aa19.42■□□□□ 0.7
TSPAN4-205ENST00000397406 ZBED4O75132 1171 aa19.41■□□□□ 0.7
TSPAN4-205ENST00000397406 ADCY7P51828 1080 aa19.41■□□□□ 0.7
TSPAN4-205ENST00000397406 MYSM1Q5VVJ2 828 aa19.41■□□□□ 0.7
TSPAN4-205ENST00000397406 GBP4Q96PP9 640 aa19.41■□□□□ 0.7
TSPAN4-205ENST00000397406 HOXC10Q9NYD6 342 aa19.41■□□□□ 0.7
TSPAN4-205ENST00000397406 OPLAHO14841 1288 aa19.4■□□□□ 0.7
TSPAN4-205ENST00000397406 PRMT2P55345 433 aa19.4■□□□□ 0.7
TSPAN4-205ENST00000397406 EARS2Q5JPH6 523 aaKnown RBP19.4■□□□□ 0.7
TSPAN4-205ENST00000397406 AGBL1Q96MI9 1066 aa19.4■□□□□ 0.7
TSPAN4-205ENST00000397406 PCDHA6Q9UN73 950 aa19.4■□□□□ 0.7
TSPAN4-205ENST00000397406 PCDHA8Q9Y5H6 950 aa19.4■□□□□ 0.7
TSPAN4-205ENST00000397406 ABCB11O95342 1321 aa19.4■□□□□ 0.7
TSPAN4-205ENST00000397406 FAM205CA6NFA0 338 aa19.39■□□□□ 0.69
TSPAN4-205ENST00000397406 FCGRTP55899 365 aa19.39■□□□□ 0.69
TSPAN4-205ENST00000397406 PABPC4Q13310 644 aaKnown RBP eCLIP19.39■□□□□ 0.693e-8■■■■■ 35.6
TSPAN4-205ENST00000397406 LBX2Q6XYB7 198 aa19.39■□□□□ 0.69
TSPAN4-205ENST00000397406 BICD2Q8TD16 824 aa19.39■□□□□ 0.69
TSPAN4-205ENST00000397406 RASGRP4Q8TDF6 673 aa19.39■□□□□ 0.69
TSPAN4-205ENST00000397406 SMCR8Q8TEV9 937 aaPredicted RBP19.39■□□□□ 0.69
TSPAN4-205ENST00000397406 CUL5Q93034 780 aa19.39■□□□□ 0.69
TSPAN4-205ENST00000397406 PSTPIP2Q9H939 334 aa19.39■□□□□ 0.69
TSPAN4-205ENST00000397406 RAVER2Q9HCJ3 691 aaKnown RBP19.39■□□□□ 0.69
TSPAN4-205ENST00000397406 CCPG1Q9ULG6 757 aa19.39■□□□□ 0.69
TSPAN4-205ENST00000397406 MYH7BA7E2Y1 1941 aa19.38■□□□□ 0.69
TSPAN4-205ENST00000397406 KIAA0100Q14667 2235 aaKnown RBP19.38■□□□□ 0.69
TSPAN4-205ENST00000397406 ATP2A1O14983 1001 aa19.38■□□□□ 0.69
TSPAN4-205ENST00000397406 CLK2P49760 499 aaKnown RBP19.38■□□□□ 0.69
TSPAN4-205ENST00000397406 OAZ1P54368 228 aa19.38■□□□□ 0.69
TSPAN4-205ENST00000397406 IRX3P78415 501 aaPredicted RBP19.38■□□□□ 0.69
TSPAN4-205ENST00000397406 TMEM132BQ14DG7 1078 aa19.38■□□□□ 0.69
TSPAN4-205ENST00000397406 FAM110CQ1W6H9 321 aa19.38■□□□□ 0.69
TSPAN4-205ENST00000397406 P2RX7Q99572 595 aaKnown RBP19.38■□□□□ 0.69
TSPAN4-205ENST00000397406 GLT8D2Q9H1C3 349 aa19.38■□□□□ 0.69
TSPAN4-205ENST00000397406 TXNRD2Q9NNW7 524 aa19.38■□□□□ 0.69
TSPAN4-205ENST00000397406 PNMA2Q9UL42 364 aa19.38■□□□□ 0.69
TSPAN4-205ENST00000397406 ZNF214Q9UL59 606 aaPredicted RBP19.38■□□□□ 0.69
TSPAN4-205ENST00000397406 CNPY2Q9Y2B0 182 aa19.38■□□□□ 0.69
TSPAN4-205ENST00000397406 GRK4P32298 578 aa19.37■□□□□ 0.69
TSPAN4-205ENST00000397406 FLT3LGP49771 235 aa19.37■□□□□ 0.69
TSPAN4-205ENST00000397406 MRPL12P52815 198 aaKnown RBP19.37■□□□□ 0.69
TSPAN4-205ENST00000397406 KRT85P78386 507 aa19.37■□□□□ 0.69
TSPAN4-205ENST00000397406 ATL3Q6DD88 541 aa19.37■□□□□ 0.69
TSPAN4-205ENST00000397406 CPXCR1Q8N123 301 aa19.37■□□□□ 0.69
TSPAN4-205ENST00000397406 REXO1Q8N1G1 1221 aaKnown RBP19.37■□□□□ 0.69
TSPAN4-205ENST00000397406 MRPL11Q9Y3B7 192 aaKnown RBP19.37■□□□□ 0.69
TSPAN4-205ENST00000397406 CTDP1Q9Y5B0 961 aaPredicted RBP19.37■□□□□ 0.69
TSPAN4-205ENST00000397406 MEIS2O14770 477 aa19.36■□□□□ 0.69
TSPAN4-205ENST00000397406 MCM4P33991 863 aa19.36■□□□□ 0.69
TSPAN4-205ENST00000397406 TOB1P50616 345 aaPredicted RBP19.36■□□□□ 0.69
TSPAN4-205ENST00000397406 HERVK_113P62684 666 aa19.36■□□□□ 0.69
TSPAN4-205ENST00000397406 UBE2SQ16763 222 aa19.36■□□□□ 0.69
TSPAN4-205ENST00000397406 PIK3AP1Q6ZUJ8 805 aa19.36■□□□□ 0.69
TSPAN4-205ENST00000397406 MB21D1Q8N884 522 aa19.36■□□□□ 0.69
TSPAN4-205ENST00000397406 RAET1EQ8TD07 263 aa19.36■□□□□ 0.69
TSPAN4-205ENST00000397406 ZNF396Q96N95 335 aaPredicted RBP19.36■□□□□ 0.69
TSPAN4-205ENST00000397406 USP28Q96RU2 1077 aa19.36■□□□□ 0.69
TSPAN4-205ENST00000397406 TMEM260Q9NX78 707 aa19.36■□□□□ 0.69
TSPAN4-205ENST00000397406 TFIP11Q9UBB9 837 aaKnown RBP19.36■□□□□ 0.69
TSPAN4-205ENST00000397406 BIN2Q9UBW5 565 aaPredicted RBP19.36■□□□□ 0.69
TSPAN4-205ENST00000397406 HOXD10P28358 340 aa19.35■□□□□ 0.69
TSPAN4-205ENST00000397406 KRT25Q7Z3Z0 450 aa19.35■□□□□ 0.69
TSPAN4-205ENST00000397406 TEX2Q8IWB9 1127 aa19.35■□□□□ 0.69
TSPAN4-205ENST00000397406 CLEC4DQ8WXI8 215 aa19.35■□□□□ 0.69
TSPAN4-205ENST00000397406 FTOQ9C0B1 505 aaKnown RBP eCLIP19.35■□□□□ 0.69
TSPAN4-205ENST00000397406 BTBD7Q9P203 1132 aa19.35■□□□□ 0.69
TSPAN4-205ENST00000397406 RBPJLQ9UBG7 517 aa19.35■□□□□ 0.69
TSPAN4-205ENST00000397406 MORF4L1Q9UBU8 362 aa19.35■□□□□ 0.69
TSPAN4-205ENST00000397406 GJD2Q9UKL4 321 aa19.35■□□□□ 0.69
TSPAN4-205ENST00000397406 PNMA3Q9UL41 463 aa19.35■□□□□ 0.69
TSPAN4-205ENST00000397406 CCDC194A0A1B0GVG4 234 aa19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 PIK3CDO00329 1044 aa19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 ALAS1P13196 640 aa19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 ELNP15502 786 aa19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 NCLP19338 710 aaKnown RBP19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 NFKBIBQ15653 356 aa19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 Q3C1V9 767 aa19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 RILPL1Q5EBL4 403 aa19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 JAKMIP3Q5VZ66 844 aa19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 SNRNP48Q6IEG0 339 aaKnown RBP19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 USP17L6PQ6QN14 398 aa19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 TMEM106CQ9BVX2 250 aa19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 GDPD2Q9HCC8 539 aa19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 CFAP45Q9UL16 551 aa19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 RIPK3Q9Y572 518 aa19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 PDE4DIPQ5VU43 2346 aa19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 MGAMO43451 1857 aa19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 TNPO2O14787 897 aaKnown RBP19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 CNMDO75829 334 aa19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 GCLCP48506 637 aaPredicted RBP19.34■□□□□ 0.69
TSPAN4-205ENST00000397406 GHRHRQ02643 423 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms