RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 FCER1AP12319 257 aa27.08■■□□□ 1.93
TSPAN4-203ENST00000397397 SYT1P21579 422 aa27.08■■□□□ 1.93
TSPAN4-203ENST00000397397 LACTBP83111 547 aaPredicted RBP27.08■■□□□ 1.93
TSPAN4-203ENST00000397397 KCTD2Q14681 263 aa27.08■■□□□ 1.93
TSPAN4-203ENST00000397397 GALNT17Q6IS24 598 aa27.08■■□□□ 1.93
TSPAN4-203ENST00000397397 RNF207Q6ZRF8 634 aa27.08■■□□□ 1.93
TSPAN4-203ENST00000397397 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.08■■□□□ 1.935e-6■■■■■ 45.5
TSPAN4-203ENST00000397397 BICD2Q8TD16 824 aa27.08■■□□□ 1.93
TSPAN4-203ENST00000397397 HOXA13P31271 388 aaPredicted RBP27.07■■□□□ 1.92
TSPAN4-203ENST00000397397 BAATQ14032 418 aaPredicted RBP27.07■■□□□ 1.92
TSPAN4-203ENST00000397397 KIF22Q14807 665 aa27.07■■□□□ 1.92
TSPAN4-203ENST00000397397 SAFBQ15424 915 aaKnown RBP eCLIP27.07■■□□□ 1.92
TSPAN4-203ENST00000397397 UBE2SQ16763 222 aa27.07■■□□□ 1.92
TSPAN4-203ENST00000397397 USP17L6PQ6QN14 398 aa27.07■■□□□ 1.92
TSPAN4-203ENST00000397397 BLIDQ8IZY5 108 aa27.07■■□□□ 1.92
TSPAN4-203ENST00000397397 SAMD3Q8N6K7 520 aa27.07■■□□□ 1.92
TSPAN4-203ENST00000397397 BRMS1Q9HCU9 246 aa27.07■■□□□ 1.92
TSPAN4-203ENST00000397397 PFASO15067 1338 aa27.07■■□□□ 1.92
TSPAN4-203ENST00000397397 VPS37CA5D8V6 355 aaPredicted RBP27.07■■□□□ 1.92
TSPAN4-203ENST00000397397 MEIS2O14770 477 aa27.07■■□□□ 1.92
TSPAN4-203ENST00000397397 FKTNO75072 461 aa27.07■■□□□ 1.92
TSPAN4-203ENST00000397397 KRT2P35908 639 aa27.07■■□□□ 1.92
TSPAN4-203ENST00000397397 HSD17B4P51659 736 aa27.07■■□□□ 1.92
TSPAN4-203ENST00000397397 FCGRTP55899 365 aa27.07■■□□□ 1.92
TSPAN4-203ENST00000397397 RPS6P62753 249 aaKnown RBP27.07■■□□□ 1.92
TSPAN4-203ENST00000397397 NPY5RQ15761 445 aa27.07■■□□□ 1.92
TSPAN4-203ENST00000397397 NOM1Q5C9Z4 860 aaKnown RBP27.07■■□□□ 1.92
TSPAN4-203ENST00000397397 SLC30A10Q6XR72 485 aa27.07■■□□□ 1.92
TSPAN4-203ENST00000397397 DAGLBQ8NCG7 672 aa27.07■■□□□ 1.92
TSPAN4-203ENST00000397397 MAF1Q9H063 256 aa27.07■■□□□ 1.92
TSPAN4-203ENST00000397397 CYP39A1Q9NYL5 469 aa27.07■■□□□ 1.92
TSPAN4-203ENST00000397397 ZNFX1Q9P2E3 1918 aaKnown RBP27.06■■□□□ 1.92
TSPAN4-203ENST00000397397 ZSWIM8A7E2V4 1837 aa27.06■■□□□ 1.92
TSPAN4-203ENST00000397397 PIK3CDO00329 1044 aa27.06■■□□□ 1.92
TSPAN4-203ENST00000397397 TNPO2O14787 897 aaKnown RBP27.06■■□□□ 1.92
TSPAN4-203ENST00000397397 ADAMTS3O15072 1205 aa27.06■■□□□ 1.92
TSPAN4-203ENST00000397397 STRNO43815 780 aa27.06■■□□□ 1.92
TSPAN4-203ENST00000397397 PTPREP23469 700 aa27.06■■□□□ 1.92
TSPAN4-203ENST00000397397 PSMC4P43686 418 aa27.06■■□□□ 1.92
TSPAN4-203ENST00000397397 GHRHRQ02643 423 aa27.06■■□□□ 1.92
TSPAN4-203ENST00000397397 ARHGAP39Q9C0H5 1083 aa27.06■■□□□ 1.92
TSPAN4-203ENST00000397397 MAP3K20Q9NYL2 800 aaKnown RBP27.06■■□□□ 1.92
TSPAN4-203ENST00000397397 BIN2Q9UBW5 565 aaPredicted RBP27.06■■□□□ 1.92
TSPAN4-203ENST00000397397 CTGFP29279 349 aa27.05■■□□□ 1.92
TSPAN4-203ENST00000397397 TEX2Q8IWB9 1127 aa27.05■■□□□ 1.92
TSPAN4-203ENST00000397397 DIS3L2Q8IYB7 885 aaKnown RBP27.05■■□□□ 1.92
TSPAN4-203ENST00000397397 ABRAQ8N0Z2 381 aa27.05■■□□□ 1.92
TSPAN4-203ENST00000397397 REXO1Q8N1G1 1221 aaKnown RBP27.05■■□□□ 1.92
TSPAN4-203ENST00000397397 CD99L2Q8TCZ2 262 aa27.05■■□□□ 1.92
TSPAN4-203ENST00000397397 OXER1Q8TDS5 423 aa27.05■■□□□ 1.92
TSPAN4-203ENST00000397397 SLC15A5A6NIM6 579 aa27.04■■□□□ 1.92
TSPAN4-203ENST00000397397 STX6O43752 255 aa27.04■■□□□ 1.92
TSPAN4-203ENST00000397397 JAKMIP3Q5VZ66 844 aa27.04■■□□□ 1.92
TSPAN4-203ENST00000397397 FCHSD1Q86WN1 690 aa27.04■■□□□ 1.92
TSPAN4-203ENST00000397397 RASGRP4Q8TDF6 673 aa27.04■■□□□ 1.92
TSPAN4-203ENST00000397397 SYTL5Q8TDW5 730 aaPredicted RBP27.04■■□□□ 1.92
TSPAN4-203ENST00000397397 ZNF296Q8WUU4 475 aaPredicted RBP27.04■■□□□ 1.92
TSPAN4-203ENST00000397397 TMEM260Q9NX78 707 aa27.04■■□□□ 1.92
TSPAN4-203ENST00000397397 POTEB2H3BUK9 544 aa27.03■■□□□ 1.92
TSPAN4-203ENST00000397397 ADORA2AP29274 412 aa27.03■■□□□ 1.92
TSPAN4-203ENST00000397397 CLK2P49760 499 aaKnown RBP27.03■■□□□ 1.92
TSPAN4-203ENST00000397397 GRB14Q14449 540 aa27.03■■□□□ 1.92
TSPAN4-203ENST00000397397 MCTP1Q6DN14 999 aa27.03■■□□□ 1.92
TSPAN4-203ENST00000397397 ERO1AQ96HE7 468 aa27.03■■□□□ 1.92
TSPAN4-203ENST00000397397 TRIM47Q96LD4 638 aa27.03■■□□□ 1.92
TSPAN4-203ENST00000397397 PCDHA6Q9UN73 950 aa27.03■■□□□ 1.92
TSPAN4-203ENST00000397397 PCDHA8Q9Y5H6 950 aa27.03■■□□□ 1.92
TSPAN4-203ENST00000397397 BTBD18B2RXH4 712 aa27.02■■□□□ 1.92
TSPAN4-203ENST00000397397 PGK2P07205 417 aa27.02■■□□□ 1.92
TSPAN4-203ENST00000397397 GNL2Q13823 731 aaKnown RBP27.02■■□□□ 1.92
TSPAN4-203ENST00000397397 COL20A1Q9P218 1284 aa27.02■■□□□ 1.92
TSPAN4-203ENST00000397397 DOCK3Q8IZD9 2030 aa27.02■■□□□ 1.92
TSPAN4-203ENST00000397397 SPDYE3A6NKU9 549 aa27.01■■□□□ 1.91
TSPAN4-203ENST00000397397 M0R2N6 131 aa27.01■■□□□ 1.91
TSPAN4-203ENST00000397397 PDIA4P13667 645 aaKnown RBP27.01■■□□□ 1.91
TSPAN4-203ENST00000397397 NR5A1Q13285 461 aa27.01■■□□□ 1.91
TSPAN4-203ENST00000397397 MORN1Q5T089 497 aa27.01■■□□□ 1.91
TSPAN4-203ENST00000397397 PURBQ96QR8 312 aaKnown RBP27.01■■□□□ 1.91
TSPAN4-203ENST00000397397 MTMR6Q9Y217 621 aa27.01■■□□□ 1.91
TSPAN4-203ENST00000397397 ZNF236Q9UL36 1845 aa27.01■■□□□ 1.91
TSPAN4-203ENST00000397397 LCTP09848 1927 aa27.01■■□□□ 1.91
TSPAN4-203ENST00000397397 FOSP01100 380 aaPredicted RBP27■■□□□ 1.91
TSPAN4-203ENST00000397397 CNTN2Q02246 1040 aa27■■□□□ 1.91
TSPAN4-203ENST00000397397 AP3B2Q13367 1082 aa27■■□□□ 1.91
TSPAN4-203ENST00000397397 MCTP2Q6DN12 878 aa27■■□□□ 1.91
TSPAN4-203ENST00000397397 PGBD1Q96JS3 809 aa27■■□□□ 1.91
TSPAN4-203ENST00000397397 TAAR1Q96RJ0 339 aa27■■□□□ 1.91
TSPAN4-203ENST00000397397 FOXP1Q9H334 677 aaPredicted RBP27■■□□□ 1.91
TSPAN4-203ENST00000397397 DNAJC25-GNG10A0A024R161 153 aa26.99■■□□□ 1.91
TSPAN4-203ENST00000397397 CAP1Q01518 475 aa26.99■■□□□ 1.91
TSPAN4-203ENST00000397397 DPP9Q86TI2 863 aa26.99■■□□□ 1.91
TSPAN4-203ENST00000397397 FAM133AQ8N9E0 248 aa26.99■■□□□ 1.91
TSPAN4-203ENST00000397397 NUDT12Q9BQG2 462 aa26.99■■□□□ 1.91
TSPAN4-203ENST00000397397 PLXNA1Q9UIW2 1896 aa26.99■■□□□ 1.91
TSPAN4-203ENST00000397397 COBLO75128 1261 aa26.99■■□□□ 1.91
TSPAN4-203ENST00000397397 MAP2K5Q13163 448 aa26.99■■□□□ 1.91
TSPAN4-203ENST00000397397 KRT25Q7Z3Z0 450 aa26.99■■□□□ 1.91
TSPAN4-203ENST00000397397 SOCS4Q8WXH5 440 aa26.99■■□□□ 1.91
TSPAN4-203ENST00000397397 ANO3Q9BYT9 981 aa26.99■■□□□ 1.91
TSPAN4-203ENST00000397397 MCOLN1Q9GZU1 580 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms