RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 LVRNQ6Q4G3 990 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 ZNF280CQ8ND82 737 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 NAF1Q96HR8 494 aaKnown RBP13.41□□□□□ -0.26
SMU1-201ENST00000397149 DENND2AQ9ULE3 1009 aa13.41□□□□□ -0.26
SMU1-201ENST00000397149 MCF2P10911 925 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 KHDRBS2Q5VWX1 349 aaKnown RBP13.4□□□□□ -0.26
SMU1-201ENST00000397149 EPAS1Q99814 870 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 TYW1Q9NV66 732 aaKnown RBP13.4□□□□□ -0.26
SMU1-201ENST00000397149 GGA1Q9UJY5 639 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 TAF5LO75529 589 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 VCAM1P19320 739 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 CLCN1P35523 988 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 SH3BGRP55822 239 aaPredicted RBP13.4□□□□□ -0.26
SMU1-201ENST00000397149 IFT88Q13099 833 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 DESI2Q9BSY9 194 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 SAR1BQ9Y6B6 198 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 UBN2Q6ZU65 1347 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 MKRN3Q13064 507 aaKnown RBP13.4□□□□□ -0.26
SMU1-201ENST00000397149 TMTC1Q8IUR5 882 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 MAML1Q92585 1016 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.4□□□□□ -0.26
SMU1-201ENST00000397149 SUPT3HB4E1H0 165 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 PCYT1AP49585 367 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 METTL23Q86XA0 190 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 SARS2Q9NP81 518 aaKnown RBP13.4□□□□□ -0.26
SMU1-201ENST00000397149 STK32BQ9NY57 414 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 SLC12A6Q9UHW9 1150 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 NFE2L3Q9Y4A8 694 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 NKTRP30414 1462 aaKnown RBP13.4□□□□□ -0.26
SMU1-201ENST00000397149 CREB3O43889 395 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 GFAPP14136 432 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 TECP42680 631 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 LBRQ14739 615 aaKnown RBP13.4□□□□□ -0.26
SMU1-201ENST00000397149 CMTR1Q8N1G2 835 aaKnown RBP13.4□□□□□ -0.26
SMU1-201ENST00000397149 GIPC2Q8TF65 315 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 ZBED2Q9BTP6 218 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 SPATS2LQ9NUQ6 558 aaKnown RBP13.4□□□□□ -0.26
SMU1-201ENST00000397149 AFF4Q9UHB7 1163 aaKnown RBP13.4□□□□□ -0.26
SMU1-201ENST00000397149 TSKSQ9UJT2 592 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 COBLO75128 1261 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 TCF3P15923 654 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 DEPDC1BQ8WUY9 529 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 EEF2KMTQ96G04 330 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 GCNAQ96QF7 691 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 SNX25Q9H3E2 840 aa13.4□□□□□ -0.26
SMU1-201ENST00000397149 DDIT3P35638 169 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 BASP1P80723 227 aaKnown RBP13.39□□□□□ -0.27
SMU1-201ENST00000397149 NFATC2IPQ8NCF5 419 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 TBC1D32Q96NH3 1257 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 CLCA2Q9UQC9 943 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 MOCS3O95396 460 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 POLR2FP61218 127 aaKnown RBP13.39□□□□□ -0.27
SMU1-201ENST00000397149 LMNB2Q03252 620 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 ARMCX5Q6P1M9 558 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 NLRP9Q7RTR0 991 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 BBOF1Q8ND07 529 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 KLHL29Q96CT2 875 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 TEX12Q9BXU0 123 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 MED4Q9NPJ6 270 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 CEBPAP49715 358 aaPredicted RBP13.39□□□□□ -0.27
SMU1-201ENST00000397149 TBL3Q12788 808 aaKnown RBP13.39□□□□□ -0.27
SMU1-201ENST00000397149 NBPF20Q3BBV1 942 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 GNPTABQ3T906 1256 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 NBPF10Q6P3W6 841 aaKnown RBP13.39□□□□□ -0.27
SMU1-201ENST00000397149 SLC26A7Q8TE54 656 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 ING2Q9H160 280 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 PACSIN2Q9UNF0 486 aaPredicted RBP13.39□□□□□ -0.27
SMU1-201ENST00000397149 LZTS1Q9Y250 596 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 SLC8A1P32418 973 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 CCT5P48643 541 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 TIMM10P62072 90 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 IL9RQ01113 521 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 POSTNQ15063 836 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 SLC52A1Q9NWF4 448 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 BCS1LQ9Y276 419 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 SBNO1A3KN83 1393 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 H0YIN7 160 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 H7C1D1 291 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 MAP3K7O43318 606 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 PNOCQ13519 176 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 MXD4Q14582 209 aaPredicted RBP13.39□□□□□ -0.27
SMU1-201ENST00000397149 DIS3L2Q8IYB7 885 aaKnown RBP13.39□□□□□ -0.27
SMU1-201ENST00000397149 KIAA2013Q8IYS2 634 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 VPS54Q9P1Q0 977 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 TCP10L2B9ZVM9 353 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 OCA2Q04671 838 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 TRIP13Q15645 432 aaPredicted RBP13.39□□□□□ -0.27
SMU1-201ENST00000397149 DNAJC7Q99615 494 aa13.39□□□□□ -0.27
SMU1-201ENST00000397149 SLCO1A2P46721 670 aa13.38□□□□□ -0.27
SMU1-201ENST00000397149 CENPAP49450 140 aa13.38□□□□□ -0.27
SMU1-201ENST00000397149 OSTNP61366 133 aa13.38□□□□□ -0.27
SMU1-201ENST00000397149 DCAF4L1Q3SXM0 396 aa13.38□□□□□ -0.27
SMU1-201ENST00000397149 DPP9Q86TI2 863 aa13.38□□□□□ -0.27
SMU1-201ENST00000397149 PHF21AQ96BD5 680 aa13.38□□□□□ -0.27
SMU1-201ENST00000397149 DYDC2Q96IM9 177 aa13.38□□□□□ -0.27
SMU1-201ENST00000397149 INTS9Q9NV88 658 aaKnown RBP13.38□□□□□ -0.27
SMU1-201ENST00000397149 MYL1P05976 194 aa13.38□□□□□ -0.27
SMU1-201ENST00000397149 ELF1P32519 619 aa13.38□□□□□ -0.27
SMU1-201ENST00000397149 IMPG1Q17R60 797 aa13.38□□□□□ -0.27
SMU1-201ENST00000397149 SRPK1Q96SB4 655 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms