RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 BLIDQ8IZY5 108 aa26.66■■□□□ 1.86
CSNK1E-203ENST00000396832 LRWD1Q9UFC0 647 aa26.66■■□□□ 1.86
CSNK1E-203ENST00000396832 LRP5O75197 1615 aa26.66■■□□□ 1.86
CSNK1E-203ENST00000396832 DDR1Q08345 913 aa26.65■■□□□ 1.86
CSNK1E-203ENST00000396832 PPP2R5BQ15173 497 aa26.65■■□□□ 1.86
CSNK1E-203ENST00000396832 HEATR3Q7Z4Q2 680 aa26.65■■□□□ 1.86
CSNK1E-203ENST00000396832 MTA3Q9BTC8 594 aa26.65■■□□□ 1.86
CSNK1E-203ENST00000396832 DDAH1O94760 285 aa26.65■■□□□ 1.86
CSNK1E-203ENST00000396832 MTIF2P46199 727 aaKnown RBP26.65■■□□□ 1.86
CSNK1E-203ENST00000396832 CCDC96Q2M329 555 aa26.65■■□□□ 1.86
CSNK1E-203ENST00000396832 EMBQ6PCB8 327 aa26.65■■□□□ 1.86
CSNK1E-203ENST00000396832 DTHD1Q6ZMT9 781 aa26.65■■□□□ 1.86
CSNK1E-203ENST00000396832 CCDC170Q8IYT3 715 aa26.65■■□□□ 1.86
CSNK1E-203ENST00000396832 MLXIPQ9HAP2 919 aa26.65■■□□□ 1.86
CSNK1E-203ENST00000396832 STRCQ7RTU9 1775 aa26.65■■□□□ 1.86
CSNK1E-203ENST00000396832 CCDC194A0A1B0GVG4 234 aa26.64■■□□□ 1.86
CSNK1E-203ENST00000396832 PSMA7O14818 248 aa26.64■■□□□ 1.86
CSNK1E-203ENST00000396832 CALM1P0DP23 149 aa26.64■■□□□ 1.86
CSNK1E-203ENST00000396832 CALM2P0DP24 149 aa26.64■■□□□ 1.86
CSNK1E-203ENST00000396832 CALM3P0DP25 149 aa26.64■■□□□ 1.86
CSNK1E-203ENST00000396832 PRDX5P30044 214 aa26.64■■□□□ 1.86
CSNK1E-203ENST00000396832 SPATS2Q86XZ4 545 aaKnown RBP26.64■■□□□ 1.86
CSNK1E-203ENST00000396832 ANKRD13CQ8N6S4 541 aa26.64■■□□□ 1.86
CSNK1E-203ENST00000396832 RUBCNQ92622 972 aa26.64■■□□□ 1.86
CSNK1E-203ENST00000396832 SUFUQ9UMX1 484 aa26.64■■□□□ 1.86
CSNK1E-203ENST00000396832 RASSF10A6NK89 507 aa26.64■■□□□ 1.86
CSNK1E-203ENST00000396832 GOLGA8HP0CJ92 632 aa26.64■■□□□ 1.86
CSNK1E-203ENST00000396832 NNTQ13423 1086 aa26.64■■□□□ 1.86
CSNK1E-203ENST00000396832 SF3B2Q13435 895 aaKnown RBP26.64■■□□□ 1.86
CSNK1E-203ENST00000396832 C4orf32Q8N8J7 132 aa26.64■■□□□ 1.86
CSNK1E-203ENST00000396832 ZIM3Q96PE6 472 aa26.64■■□□□ 1.86
CSNK1E-203ENST00000396832 BCL9O00512 1426 aa26.64■■□□□ 1.86
CSNK1E-203ENST00000396832 PDS5AQ29RF7 1337 aaKnown RBP26.64■■□□□ 1.85
CSNK1E-203ENST00000396832 PPARDQ03181 441 aa26.63■■□□□ 1.85
CSNK1E-203ENST00000396832 A1CFQ9NQ94 594 aaKnown RBP26.63■■□□□ 1.85
CSNK1E-203ENST00000396832 CAPN6Q9Y6Q1 641 aa26.63■■□□□ 1.85
CSNK1E-203ENST00000396832 DCCP43146 1447 aa26.63■■□□□ 1.85
CSNK1E-203ENST00000396832 KLRC4O43908 158 aa26.63■■□□□ 1.85
CSNK1E-203ENST00000396832 KRT14P02533 472 aa26.63■■□□□ 1.85
CSNK1E-203ENST00000396832 USP17L8P0C7I0 530 aa26.63■■□□□ 1.85
CSNK1E-203ENST00000396832 CRKLP46109 303 aaKnown RBP26.63■■□□□ 1.85
CSNK1E-203ENST00000396832 DYNLL2Q96FJ2 89 aa26.63■■□□□ 1.85
CSNK1E-203ENST00000396832 CNOT6LQ96LI5 555 aaKnown RBP26.63■■□□□ 1.85
CSNK1E-203ENST00000396832 CD248Q9HCU0 757 aa26.63■■□□□ 1.85
CSNK1E-203ENST00000396832 EXOC1Q9NV70 894 aa26.63■■□□□ 1.85
CSNK1E-203ENST00000396832 EEF1GP26641 437 aaKnown RBP26.63■■□□□ 1.85
CSNK1E-203ENST00000396832 ITIH3Q06033 890 aa26.63■■□□□ 1.85
CSNK1E-203ENST00000396832 RPAINQ86UA6 219 aa26.63■■□□□ 1.85
CSNK1E-203ENST00000396832 DCP1AQ9NPI6 582 aaPredicted RBP26.63■■□□□ 1.85
CSNK1E-203ENST00000396832 FAM207AQ9NSI2 230 aaPredicted RBP26.63■■□□□ 1.85
CSNK1E-203ENST00000396832 STIM2Q9P246 746 aa26.63■■□□□ 1.85
CSNK1E-203ENST00000396832 LONP1P36776 959 aaKnown RBP26.62■■□□□ 1.85
CSNK1E-203ENST00000396832 DNM2P50570 870 aa26.62■■□□□ 1.85
CSNK1E-203ENST00000396832 VAV2P52735 878 aa26.62■■□□□ 1.85
CSNK1E-203ENST00000396832 MECOMQ03112 1051 aa26.62■■□□□ 1.85
CSNK1E-203ENST00000396832 STK4Q13043 487 aa26.62■■□□□ 1.85
CSNK1E-203ENST00000396832 ANKRD40Q6AI12 368 aa26.62■■□□□ 1.85
CSNK1E-203ENST00000396832 ZNF572Q7Z3I7 529 aaPredicted RBP26.62■■□□□ 1.85
CSNK1E-203ENST00000396832 TRIM58Q8NG06 486 aa26.62■■□□□ 1.85
CSNK1E-203ENST00000396832 ZNF263O14978 683 aa26.62■■□□□ 1.85
CSNK1E-203ENST00000396832 KCNQ4P56696 695 aa26.62■■□□□ 1.85
CSNK1E-203ENST00000396832 PDE4DQ08499 809 aa26.62■■□□□ 1.85
CSNK1E-203ENST00000396832 KCTD19Q17RG1 926 aaPredicted RBP26.62■■□□□ 1.85
CSNK1E-203ENST00000396832 TTI2Q6NXR4 508 aa26.62■■□□□ 1.85
CSNK1E-203ENST00000396832 RNPC3Q96LT9 517 aaKnown RBP26.62■■□□□ 1.85
CSNK1E-203ENST00000396832 DUSP9Q99956 384 aaKnown RBP26.62■■□□□ 1.85
CSNK1E-203ENST00000396832 TTYH3Q9C0H2 523 aa26.62■■□□□ 1.85
CSNK1E-203ENST00000396832 PLCG1P19174 1290 aa26.61■■□□□ 1.85
CSNK1E-203ENST00000396832 LSP1P33241 339 aa26.61■■□□□ 1.85
CSNK1E-203ENST00000396832 NAP1L1P55209 391 aaKnown RBP26.61■■□□□ 1.85
CSNK1E-203ENST00000396832 ASIC1P78348 528 aa26.61■■□□□ 1.85
CSNK1E-203ENST00000396832 CAVIN3Q969G5 261 aa26.61■■□□□ 1.85
CSNK1E-203ENST00000396832 NOC4LQ9BVI4 516 aaKnown RBP26.61■■□□□ 1.85
CSNK1E-203ENST00000396832 MCM9Q9NXL9 1143 aa26.61■■□□□ 1.85
CSNK1E-203ENST00000396832 USP17L3A6NCW0 530 aa26.61■■□□□ 1.85
CSNK1E-203ENST00000396832 USP17L4A6NCW7 530 aa26.61■■□□□ 1.85
CSNK1E-203ENST00000396832 EPHB6O15197 1021 aa26.61■■□□□ 1.85
CSNK1E-203ENST00000396832 ZPR1O75312 459 aa26.61■■□□□ 1.85
CSNK1E-203ENST00000396832 TACC1O75410 805 aa26.61■■□□□ 1.85
CSNK1E-203ENST00000396832 MOCS3O95396 460 aa26.61■■□□□ 1.85
CSNK1E-203ENST00000396832 NTSR2O95665 410 aa26.61■■□□□ 1.85
CSNK1E-203ENST00000396832 SRGNP10124 158 aa26.61■■□□□ 1.85
CSNK1E-203ENST00000396832 GUCY1A3Q02108 690 aa26.61■■□□□ 1.85
CSNK1E-203ENST00000396832 CAVIN4Q5BKX8 364 aa26.61■■□□□ 1.85
CSNK1E-203ENST00000396832 NAA35Q5VZE5 725 aa26.61■■□□□ 1.85
CSNK1E-203ENST00000396832 HAUS3Q68CZ6 603 aa26.61■■□□□ 1.85
CSNK1E-203ENST00000396832 MICALCLQ6ZW33 695 aa26.61■■□□□ 1.85
CSNK1E-203ENST00000396832 USP17L1Q7RTZ2 530 aa26.61■■□□□ 1.85
CSNK1E-203ENST00000396832 SLC51AQ86UW1 340 aa26.61■■□□□ 1.85
CSNK1E-203ENST00000396832 TSGA10Q9BZW7 698 aa26.61■■□□□ 1.85
CSNK1E-203ENST00000396832 EPN3Q9H201 632 aa26.61■■□□□ 1.85
CSNK1E-203ENST00000396832 XIRP1Q702N8 1843 aaKnown RBP26.6■■□□□ 1.85
CSNK1E-203ENST00000396832 CACNA1SQ13698 1873 aa26.6■■□□□ 1.85
CSNK1E-203ENST00000396832 NUTM2BA6NNL0 878 aaPredicted RBP26.6■■□□□ 1.85
CSNK1E-203ENST00000396832 NUTM2EB1AL46 878 aaPredicted RBP26.6■■□□□ 1.85
CSNK1E-203ENST00000396832 NCK2O43639 380 aa26.6■■□□□ 1.85
CSNK1E-203ENST00000396832 RNF187Q5TA31 235 aaPredicted RBP26.6■■□□□ 1.85
CSNK1E-203ENST00000396832 BRIP1Q9BX63 1249 aa26.6■■□□□ 1.85
CSNK1E-203ENST00000396832 ZBED6P86452 979 aa26.6■■□□□ 1.85
CSNK1E-203ENST00000396832 SPA17Q15506 151 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms