RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 SCRN1Q12765 414 aa20.19■□□□□ 0.82
TNFSF13-205ENST00000396545 SHHQ15465 462 aa20.19■□□□□ 0.82
TNFSF13-205ENST00000396545 SMARCC2Q8TAQ2 1214 aa20.19■□□□□ 0.82
TNFSF13-205ENST00000396545 ISY1Q9ULR0 285 aaKnown RBP20.19■□□□□ 0.82
TNFSF13-205ENST00000396545 ATP6V1DQ9Y5K8 247 aa20.19■□□□□ 0.82
TNFSF13-205ENST00000396545 CDH23Q9H251 3354 aa20.19■□□□□ 0.82
TNFSF13-205ENST00000396545 SYNRGQ9UMZ2 1314 aa20.18■□□□□ 0.82
TNFSF13-205ENST00000396545 CTDSPL2Q05D32 466 aa20.18■□□□□ 0.82
TNFSF13-205ENST00000396545 APOBRQ0VD83 1088 aa20.18■□□□□ 0.82
TNFSF13-205ENST00000396545 SART3Q15020 963 aaKnown RBP20.18■□□□□ 0.82
TNFSF13-205ENST00000396545 C9orf50Q5SZB4 431 aa20.18■□□□□ 0.82
TNFSF13-205ENST00000396545 ESR2Q92731 530 aa20.18■□□□□ 0.82
TNFSF13-205ENST00000396545 FGD4Q96M96 766 aa20.18■□□□□ 0.82
TNFSF13-205ENST00000396545 TSEN34Q9BSV6 310 aaKnown RBP20.18■□□□□ 0.82
TNFSF13-205ENST00000396545 CTDP1Q9Y5B0 961 aaPredicted RBP20.18■□□□□ 0.82
TNFSF13-205ENST00000396545 ORC4O43929 436 aa20.17■□□□□ 0.82
TNFSF13-205ENST00000396545 ANTXR2P58335 489 aa20.17■□□□□ 0.82
TNFSF13-205ENST00000396545 LARP1BQ659C4 914 aaKnown RBP20.17■□□□□ 0.82
TNFSF13-205ENST00000396545 SLFN13Q68D06 897 aa20.17■□□□□ 0.82
TNFSF13-205ENST00000396545 TMTC2Q8N394 836 aa20.17■□□□□ 0.82
TNFSF13-205ENST00000396545 CHST13Q8NET6 341 aa20.17■□□□□ 0.82
TNFSF13-205ENST00000396545 GUCD1Q96NT3 240 aa20.17■□□□□ 0.82
TNFSF13-205ENST00000396545 FBXO40Q9UH90 709 aa20.17■□□□□ 0.82
TNFSF13-205ENST00000396545 FAM184BQ9ULE4 1060 aa20.17■□□□□ 0.82
TNFSF13-205ENST00000396545 TACC3Q9Y6A5 838 aa20.17■□□□□ 0.82
TNFSF13-205ENST00000396545 NEDD4P46934 1319 aa20.17■□□□□ 0.82
TNFSF13-205ENST00000396545 B4E1Z4 1266 aa20.17■□□□□ 0.82
TNFSF13-205ENST00000396545 DLL1O00548 723 aa20.17■□□□□ 0.82
TNFSF13-205ENST00000396545 CLTBP09497 229 aa20.17■□□□□ 0.82
TNFSF13-205ENST00000396545 BMP3P12645 472 aa20.17■□□□□ 0.82
TNFSF13-205ENST00000396545 ITGB8P26012 769 aa20.17■□□□□ 0.82
TNFSF13-205ENST00000396545 TFAP4Q01664 338 aa20.17■□□□□ 0.82
TNFSF13-205ENST00000396545 KLHDC9Q8NEP7 349 aa20.17■□□□□ 0.82
TNFSF13-205ENST00000396545 GPT2Q8TD30 523 aa20.17■□□□□ 0.82
TNFSF13-205ENST00000396545 ZHX1Q9UKY1 873 aaPredicted RBP20.17■□□□□ 0.82
TNFSF13-205ENST00000396545 KIAA0355O15063 1070 aa20.16■□□□□ 0.82
TNFSF13-205ENST00000396545 DUSP11O75319 330 aaKnown RBP20.16■□□□□ 0.82
TNFSF13-205ENST00000396545 MBD3O95983 291 aa20.16■□□□□ 0.82
TNFSF13-205ENST00000396545 PDIA3P30101 505 aaKnown RBP20.16■□□□□ 0.82
TNFSF13-205ENST00000396545 LIFRP42702 1097 aa20.16■□□□□ 0.82
TNFSF13-205ENST00000396545 ACLYP53396 1101 aa20.16■□□□□ 0.82
TNFSF13-205ENST00000396545 L1TD1Q5T7N2 865 aaKnown RBP20.16■□□□□ 0.82
TNFSF13-205ENST00000396545 CCSAPQ6IQ19 270 aaPredicted RBP20.16■□□□□ 0.82
TNFSF13-205ENST00000396545 ANKRD35Q8N283 1001 aa20.16■□□□□ 0.82
TNFSF13-205ENST00000396545 NSUN7Q8NE18 718 aaKnown RBP20.16■□□□□ 0.82
TNFSF13-205ENST00000396545 GMCL1Q96IK5 515 aa20.16■□□□□ 0.82
TNFSF13-205ENST00000396545 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.16■□□□□ 0.82
TNFSF13-205ENST00000396545 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.16■□□□□ 0.82
TNFSF13-205ENST00000396545 JAK2O60674 1132 aa20.15■□□□□ 0.82
TNFSF13-205ENST00000396545 PQBP1O60828 265 aaKnown RBP20.15■□□□□ 0.82
TNFSF13-205ENST00000396545 DTNBO60941 627 aa20.15■□□□□ 0.82
TNFSF13-205ENST00000396545 FDX1P10109 184 aa20.15■□□□□ 0.82
TNFSF13-205ENST00000396545 STAT2P52630 851 aa20.15■□□□□ 0.82
TNFSF13-205ENST00000396545 ACVR2BQ13705 512 aa20.15■□□□□ 0.82
TNFSF13-205ENST00000396545 CHST3Q7LGC8 479 aa20.15■□□□□ 0.82
TNFSF13-205ENST00000396545 ANKRD33Q7Z3H0 272 aa20.15■□□□□ 0.82
TNFSF13-205ENST00000396545 ZSWIM5Q9P217 1185 aa20.15■□□□□ 0.82
TNFSF13-205ENST00000396545 MCM3APO60318 1980 aa20.15■□□□□ 0.82
TNFSF13-205ENST00000396545 ERICH2A1L162 156 aa20.14■□□□□ 0.81
TNFSF13-205ENST00000396545 GOLGA6L3A6NEY3 463 aa20.14■□□□□ 0.81
TNFSF13-205ENST00000396545 MOXD2PA6NHM9 499 aa20.14■□□□□ 0.81
TNFSF13-205ENST00000396545 TMEM232C9JQI7 657 aa20.14■□□□□ 0.81
TNFSF13-205ENST00000396545 ADCY6O43306 1168 aa20.14■□□□□ 0.81
TNFSF13-205ENST00000396545 KDM4AO75164 1064 aa20.14■□□□□ 0.81
TNFSF13-205ENST00000396545 CTDNEP1O95476 244 aa20.14■□□□□ 0.81
TNFSF13-205ENST00000396545 SGMS1Q86VZ5 419 aa20.14■□□□□ 0.81
TNFSF13-205ENST00000396545 TOX2Q96NM4 488 aa20.14■□□□□ 0.81
TNFSF13-205ENST00000396545 ABHD16BQ9H3Z7 469 aa20.14■□□□□ 0.81
TNFSF13-205ENST00000396545 TOMM22Q9NS69 142 aa20.14■□□□□ 0.81
TNFSF13-205ENST00000396545 VPS37CA5D8V6 355 aaPredicted RBP20.13■□□□□ 0.81
TNFSF13-205ENST00000396545 MYADML2A6NDP7 307 aa20.13■□□□□ 0.81
TNFSF13-205ENST00000396545 SH2B2O14492 632 aaPredicted RBP20.13■□□□□ 0.81
TNFSF13-205ENST00000396545 DHX16O60231 1041 aaKnown RBP20.13■□□□□ 0.81
TNFSF13-205ENST00000396545 CST5P28325 142 aaPredicted RBP20.13■□□□□ 0.81
TNFSF13-205ENST00000396545 HMGN5P82970 282 aaKnown RBP20.13■□□□□ 0.81
TNFSF13-205ENST00000396545 KCNA10Q16322 511 aa20.13■□□□□ 0.81
TNFSF13-205ENST00000396545 ZNF697Q5TEC3 545 aa20.13■□□□□ 0.81
TNFSF13-205ENST00000396545 CYB5R4Q7L1T6 521 aa20.13■□□□□ 0.81
TNFSF13-205ENST00000396545 ARMCX2Q7L311 632 aa20.13■□□□□ 0.81
TNFSF13-205ENST00000396545 NUP133Q8WUM0 1156 aa20.13■□□□□ 0.81
TNFSF13-205ENST00000396545 FAM161BQ96MY7 647 aa20.13■□□□□ 0.81
TNFSF13-205ENST00000396545 STARD7Q9NQZ5 370 aa20.13■□□□□ 0.81
TNFSF13-205ENST00000396545 HOMER2Q9NSB8 354 aa20.13■□□□□ 0.81
TNFSF13-205ENST00000396545 PRUNE2Q8WUY3 3088 aa20.13■□□□□ 0.81
TNFSF13-205ENST00000396545 ZNF536O15090 1300 aa20.13■□□□□ 0.81
TNFSF13-205ENST00000396545 PLA2G6O60733 806 aa20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 SLC1A4P43007 532 aa20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 RCAN1P53805 252 aa20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 FAAP100Q0VG06 881 aa20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 CCDC144BQ3MJ40 725 aa20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 CCDC178Q5BJE1 867 aa20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 PPP4R3BQ5MIZ7 849 aa20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 FAM160B2Q86V87 743 aa20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 IQCA1Q86XH1 822 aa20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 IGDCC4Q8TDY8 1250 aa20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 CHURC1Q8WUH1 139 aa20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 KATNBL1Q9H079 304 aa20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 UPF3AQ9H1J1 476 aaKnown RBP20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 ACAD9Q9H845 621 aa20.12■□□□□ 0.81
TNFSF13-205ENST00000396545 IL17RBQ9NRM6 502 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms