RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 RASA1P20936 1047 aa17.53■□□□□ 0.4
HOXA3-202ENST00000396352 TM4SF1P30408 202 aa17.53■□□□□ 0.4
HOXA3-202ENST00000396352 CYP27A1Q02318 531 aa17.53■□□□□ 0.4
HOXA3-202ENST00000396352 LETM2Q2VYF4 491 aa17.53■□□□□ 0.4
HOXA3-202ENST00000396352 CCDC24Q8N4L8 307 aa17.53■□□□□ 0.4
HOXA3-202ENST00000396352 NOC4LQ9BVI4 516 aaKnown RBP17.53■□□□□ 0.4
HOXA3-202ENST00000396352 SPZ1Q9BXG8 430 aa17.53■□□□□ 0.4
HOXA3-202ENST00000396352 ACBD3Q9H3P7 528 aa17.53■□□□□ 0.4
HOXA3-202ENST00000396352 HPCAL4Q9UM19 191 aa17.53■□□□□ 0.4
HOXA3-202ENST00000396352 STX8Q9UNK0 236 aa17.53■□□□□ 0.4
HOXA3-202ENST00000396352 KLRF2D3W0D1 207 aa17.53■□□□□ 0.4
HOXA3-202ENST00000396352 MTIF2P46199 727 aaKnown RBP17.53■□□□□ 0.4
HOXA3-202ENST00000396352 GRIK5Q16478 980 aa17.53■□□□□ 0.4
HOXA3-202ENST00000396352 KRT25Q7Z3Z0 450 aa17.53■□□□□ 0.4
HOXA3-202ENST00000396352 HPS3Q969F9 1004 aa17.53■□□□□ 0.4
HOXA3-202ENST00000396352 NYXQ9GZU5 481 aa17.53■□□□□ 0.4
HOXA3-202ENST00000396352 LDHBP07195 334 aaKnown RBP17.53■□□□□ 0.4
HOXA3-202ENST00000396352 MCM3P25205 808 aa17.53■□□□□ 0.4
HOXA3-202ENST00000396352 DIXDC1Q155Q3 683 aa17.53■□□□□ 0.4
HOXA3-202ENST00000396352 LZTS2Q9BRK4 669 aa17.53■□□□□ 0.4
HOXA3-202ENST00000396352 SEMA6BQ9H3T3 888 aa17.53■□□□□ 0.4
HOXA3-202ENST00000396352 CWC15Q9P013 229 aaKnown RBP17.53■□□□□ 0.4
HOXA3-202ENST00000396352 FEZ2Q9UHY8 353 aaPredicted RBP17.53■□□□□ 0.4
HOXA3-202ENST00000396352 LCMT1Q9UIC8 334 aa17.53■□□□□ 0.4
HOXA3-202ENST00000396352 PLEKP08567 350 aaPredicted RBP17.52■□□□□ 0.4
HOXA3-202ENST00000396352 VAV2P52735 878 aa17.52■□□□□ 0.4
HOXA3-202ENST00000396352 NAPAP54920 295 aa17.52■□□□□ 0.4
HOXA3-202ENST00000396352 NONOQ15233 471 aaKnown RBP eCLIP17.52■□□□□ 0.4
HOXA3-202ENST00000396352 SPATA31A5Q5VU36 1347 aa17.52■□□□□ 0.4
HOXA3-202ENST00000396352 SPATA31A7Q8IWB4 1347 aa17.52■□□□□ 0.4
HOXA3-202ENST00000396352 CNTNAP4Q9C0A0 1308 aa17.52■□□□□ 0.4
HOXA3-202ENST00000396352 MACROD2A1Z1Q3 448 aa17.52■□□□□ 0.4
HOXA3-202ENST00000396352 NUTM2BA6NNL0 878 aaPredicted RBP17.52■□□□□ 0.4
HOXA3-202ENST00000396352 NUTM2EB1AL46 878 aaPredicted RBP17.52■□□□□ 0.4
HOXA3-202ENST00000396352 PRPF6O94906 941 aaKnown RBP17.52■□□□□ 0.4
HOXA3-202ENST00000396352 ZNF444Q8N0Y2 327 aaPredicted RBP17.52■□□□□ 0.4
HOXA3-202ENST00000396352 FAM204AQ9H8W3 233 aa17.52■□□□□ 0.4
HOXA3-202ENST00000396352 SRP68Q9UHB9 627 aaKnown RBP17.52■□□□□ 0.4
HOXA3-202ENST00000396352 RNF40O75150 1001 aa17.52■□□□□ 0.39
HOXA3-202ENST00000396352 MYBL2P10244 700 aa17.52■□□□□ 0.39
HOXA3-202ENST00000396352 HNRNPH3P31942 346 aaKnown RBP17.52■□□□□ 0.39
HOXA3-202ENST00000396352 PPP1R2P41236 205 aa17.52■□□□□ 0.39
HOXA3-202ENST00000396352 TECP42680 631 aa17.52■□□□□ 0.39
HOXA3-202ENST00000396352 MAP9Q49MG5 647 aa17.52■□□□□ 0.39
HOXA3-202ENST00000396352 LEKR1Q6ZMV7 388 aa17.52■□□□□ 0.39
HOXA3-202ENST00000396352 NBPF5PQ86XG9 351 aaPredicted RBP17.52■□□□□ 0.39
HOXA3-202ENST00000396352 COG1Q8WTW3 980 aa17.52■□□□□ 0.39
HOXA3-202ENST00000396352 TGFBRAP1Q8WUH2 860 aa17.52■□□□□ 0.39
HOXA3-202ENST00000396352 CCDC47Q96A33 483 aaKnown RBP17.52■□□□□ 0.39
HOXA3-202ENST00000396352 ZMYND10O75800 440 aa17.51■□□□□ 0.39
HOXA3-202ENST00000396352 IPO7O95373 1038 aaKnown RBP17.51■□□□□ 0.39
HOXA3-202ENST00000396352 IDEP14735 1019 aa17.51■□□□□ 0.39
HOXA3-202ENST00000396352 KRT26Q7Z3Y9 468 aa17.51■□□□□ 0.39
HOXA3-202ENST00000396352 NEK8Q86SG6 692 aa17.51■□□□□ 0.39
HOXA3-202ENST00000396352 PCMTD1Q96MG8 357 aaPredicted RBP17.51■□□□□ 0.39
HOXA3-202ENST00000396352 LRWD1Q9UFC0 647 aa17.51■□□□□ 0.39
HOXA3-202ENST00000396352 SMCO2A6NFE2 343 aa17.51■□□□□ 0.39
HOXA3-202ENST00000396352 EPHB6O15197 1021 aa17.51■□□□□ 0.39
HOXA3-202ENST00000396352 SLC20A2Q08357 652 aa17.51■□□□□ 0.39
HOXA3-202ENST00000396352 CENPPQ6IPU0 288 aa17.51■□□□□ 0.39
HOXA3-202ENST00000396352 SECISBP2LQ93073 1101 aaKnown RBP17.51■□□□□ 0.39
HOXA3-202ENST00000396352 SETDB2Q96T68 719 aa17.51■□□□□ 0.39
HOXA3-202ENST00000396352 SIK3Q9Y2K2 1263 aa17.51■□□□□ 0.39
HOXA3-202ENST00000396352 TNNT3P45378 269 aaPredicted RBP17.5■□□□□ 0.39
HOXA3-202ENST00000396352 PPP4CP60510 307 aa17.5■□□□□ 0.39
HOXA3-202ENST00000396352 CNNM4Q6P4Q7 775 aa17.5■□□□□ 0.39
HOXA3-202ENST00000396352 NARFQ9UHQ1 456 aa17.5■□□□□ 0.39
HOXA3-202ENST00000396352 SAP30BPQ9UHR5 308 aaKnown RBP17.5■□□□□ 0.39
HOXA3-202ENST00000396352 PLAGL2Q9UPG8 496 aa17.5■□□□□ 0.39
HOXA3-202ENST00000396352 KIF5AQ12840 1032 aa17.5■□□□□ 0.39
HOXA3-202ENST00000396352 POTEDQ86YR6 584 aa17.5■□□□□ 0.39
HOXA3-202ENST00000396352 GSPT2Q8IYD1 628 aaKnown RBP17.5■□□□□ 0.39
HOXA3-202ENST00000396352 WDR66Q8TBY9 1149 aa17.5■□□□□ 0.39
HOXA3-202ENST00000396352 SMCR8Q8TEV9 937 aaPredicted RBP17.5■□□□□ 0.39
HOXA3-202ENST00000396352 TSGA10Q9BZW7 698 aa17.5■□□□□ 0.39
HOXA3-202ENST00000396352 ARHGAP20Q9P2F6 1191 aa17.5■□□□□ 0.39
HOXA3-202ENST00000396352 CAPN6Q9Y6Q1 641 aa17.5■□□□□ 0.39
HOXA3-202ENST00000396352 C2orf54Q08AI8 447 aa17.5■□□□□ 0.39
HOXA3-202ENST00000396352 FKBP15Q5T1M5 1219 aa17.5■□□□□ 0.39
HOXA3-202ENST00000396352 FOXR1Q6PIV2 292 aa17.5■□□□□ 0.39
HOXA3-202ENST00000396352 CREG2Q8IUH2 290 aa17.5■□□□□ 0.39
HOXA3-202ENST00000396352 AMOTL1Q8IY63 956 aa17.5■□□□□ 0.39
HOXA3-202ENST00000396352 CAGE1Q8TC20 777 aa17.5■□□□□ 0.39
HOXA3-202ENST00000396352 SLC39A2Q9NP94 309 aa17.5■□□□□ 0.39
HOXA3-202ENST00000396352 JADE2Q9NQC1 790 aa17.5■□□□□ 0.39
HOXA3-202ENST00000396352 BLOC1S4Q9NUP1 217 aa17.5■□□□□ 0.39
HOXA3-202ENST00000396352 AMPD3Q01432 767 aa17.49■□□□□ 0.39
HOXA3-202ENST00000396352 CCNI2Q6ZMN8 369 aaPredicted RBP17.49■□□□□ 0.39
HOXA3-202ENST00000396352 SRLQ86TD4 932 aa17.49■□□□□ 0.39
HOXA3-202ENST00000396352 MAPKAPK5Q8IW41 473 aa17.49■□□□□ 0.39
HOXA3-202ENST00000396352 FNBP4Q8N3X1 1017 aaPredicted RBP17.49■□□□□ 0.39
HOXA3-202ENST00000396352 TBCKQ8TEA7 893 aa17.49■□□□□ 0.39
HOXA3-202ENST00000396352 CCDC42Q96M95 316 aa17.49■□□□□ 0.39
HOXA3-202ENST00000396352 TSPYL1Q9H0U9 437 aa17.49■□□□□ 0.39
HOXA3-202ENST00000396352 C6orf50Q9HD87 102 aa17.49■□□□□ 0.39
HOXA3-202ENST00000396352 SNX12Q9UMY4 172 aa17.49■□□□□ 0.39
HOXA3-202ENST00000396352 IVLP07476 585 aa17.49■□□□□ 0.39
HOXA3-202ENST00000396352 GRB10Q13322 594 aa17.49■□□□□ 0.39
HOXA3-202ENST00000396352 ZNF572Q7Z3I7 529 aaPredicted RBP17.49■□□□□ 0.39
HOXA3-202ENST00000396352 IQCDQ96DY2 449 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms