RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 PAFAH1B1P43034 410 aa9.67□□□□□ -0.86
BDNF-204ENST00000395980 HAUS3Q68CZ6 603 aa9.67□□□□□ -0.86
BDNF-204ENST00000395980 GDAP1L1Q96MZ0 367 aa9.67□□□□□ -0.86
BDNF-204ENST00000395980 LRRC1Q9BTT6 524 aa9.67□□□□□ -0.86
BDNF-204ENST00000395980 DMGDHQ9UI17 866 aaKnown RBP9.67□□□□□ -0.86
BDNF-204ENST00000395980 FAM205AQ6ZU69 1335 aa9.67□□□□□ -0.86
BDNF-204ENST00000395980 GNAQP50148 359 aa9.67□□□□□ -0.86
BDNF-204ENST00000395980 CHRNDQ07001 517 aa9.67□□□□□ -0.86
BDNF-204ENST00000395980 MREGQ8N565 214 aa9.67□□□□□ -0.86
BDNF-204ENST00000395980 CAPN6Q9Y6Q1 641 aa9.67□□□□□ -0.86
BDNF-204ENST00000395980 DUSP10Q9Y6W6 482 aa9.67□□□□□ -0.86
BDNF-204ENST00000395980 KIF11P52732 1056 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 CYP27A1Q02318 531 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 SBK1Q52WX2 424 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 FOXR2Q6PJQ5 311 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 PLCD3Q8N3E9 789 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 RNF10Q8N5U6 811 aaKnown RBP9.66□□□□□ -0.86
BDNF-204ENST00000395980 PCMTD1Q96MG8 357 aaPredicted RBP9.66□□□□□ -0.86
BDNF-204ENST00000395980 SLC4A9Q96Q91 983 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 TRIM9Q9C026 710 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 COL1A1P02452 1464 aaPredicted RBP9.66□□□□□ -0.86
BDNF-204ENST00000395980 FLT1P17948 1338 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 SMIM22K7EJ46 135 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 AMPD3Q01432 767 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 UBE4AQ14139 1066 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 CCDC181Q5TID7 509 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 SUSD4Q5VX71 490 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 ANKRD40Q6AI12 368 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 CNNM4Q6P4Q7 775 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 CCDC84Q86UT8 332 aaPredicted RBP9.66□□□□□ -0.86
BDNF-204ENST00000395980 CD302Q8IX05 232 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 ANKS1AQ92625 1134 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 NCAPGQ9BPX3 1015 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 ABCF2Q9UG63 623 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 SIK3Q9Y2K2 1263 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 CASZ1Q86V15 1759 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 CYP2D7A0A087X1C5 515 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 ANKRD65E5RJM6 399 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 FGFR1OPO95684 399 aaKnown RBP9.66□□□□□ -0.86
BDNF-204ENST00000395980 INPP5BP32019 993 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 PDE4DQ08499 809 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 ARHGAP20Q9P2F6 1191 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 ARPP21Q9UBL0 812 aaPredicted RBP9.66□□□□□ -0.86
BDNF-204ENST00000395980 KIAA1551Q9HCM1 1747 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 SSU72P8A0A1W2PR75 194 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 USP17L12C9JPN9 530 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 USP17L21D6R901 530 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 KLK7P49862 253 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 ORC2Q13416 577 aaPredicted RBP9.66□□□□□ -0.86
BDNF-204ENST00000395980 C8orf74Q6P047 294 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 KDM7AQ6ZMT4 941 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 IFT20Q8IY31 132 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 CNPY4Q8N129 248 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 RRP36Q96EU6 259 aaKnown RBP9.66□□□□□ -0.86
BDNF-204ENST00000395980 TMEM60Q9H2L4 133 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 ATP8A2Q9NTI2 1148 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 TCP11L1Q9NUJ3 509 aa9.66□□□□□ -0.86
BDNF-204ENST00000395980 MAST2Q6P0Q8 1798 aa9.65□□□□□ -0.86
BDNF-204ENST00000395980 DYNLL1P63167 89 aaKnown RBP9.65□□□□□ -0.86
BDNF-204ENST00000395980 EZH2Q15910 746 aaKnown RBP9.65□□□□□ -0.86
BDNF-204ENST00000395980 CCDC178Q5BJE1 867 aa9.65□□□□□ -0.86
BDNF-204ENST00000395980 TTMPQ5BVD1 217 aa9.65□□□□□ -0.86
BDNF-204ENST00000395980 CENPPQ6IPU0 288 aa9.65□□□□□ -0.86
BDNF-204ENST00000395980 YTHDF3Q7Z739 585 aaKnown RBP9.65□□□□□ -0.86
BDNF-204ENST00000395980 HDAC7Q8WUI4 952 aa9.65□□□□□ -0.86
BDNF-204ENST00000395980 GDF3Q9NR23 364 aa9.65□□□□□ -0.86
BDNF-204ENST00000395980 GGA2Q9UJY4 613 aa9.65□□□□□ -0.86
BDNF-204ENST00000395980 ADAMTS3O15072 1205 aa9.65□□□□□ -0.86
BDNF-204ENST00000395980 PAK2Q13177 524 aa9.65□□□□□ -0.86
BDNF-204ENST00000395980 MAN2A1Q16706 1144 aa9.65□□□□□ -0.86
BDNF-204ENST00000395980 VWA3BQ502W6 1294 aa9.65□□□□□ -0.86
BDNF-204ENST00000395980 RCSD1Q6JBY9 416 aa9.65□□□□□ -0.86
BDNF-204ENST00000395980 MICALCLQ6ZW33 695 aa9.65□□□□□ -0.86
BDNF-204ENST00000395980 CABP7Q86V35 215 aa9.65□□□□□ -0.86
BDNF-204ENST00000395980 DGKHQ86XP1 1220 aa9.65□□□□□ -0.86
BDNF-204ENST00000395980 TSEN2Q8NCE0 465 aaKnown RBP9.65□□□□□ -0.86
BDNF-204ENST00000395980 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.65□□□□□ -0.86
BDNF-204ENST00000395980 CRNKL1Q9BZJ0 848 aaKnown RBP9.65□□□□□ -0.86
BDNF-204ENST00000395980 MLXIPQ9HAP2 919 aa9.65□□□□□ -0.86
BDNF-204ENST00000395980 PCDHA6Q9UN73 950 aa9.65□□□□□ -0.86
BDNF-204ENST00000395980 PCDHA8Q9Y5H6 950 aa9.65□□□□□ -0.86
BDNF-204ENST00000395980 GRID2IPA4D2P6 1211 aa9.65□□□□□ -0.87
BDNF-204ENST00000395980 MOCS3O95396 460 aa9.65□□□□□ -0.87
BDNF-204ENST00000395980 PLCG1P19174 1290 aa9.65□□□□□ -0.87
BDNF-204ENST00000395980 EIF4A3P38919 411 aaKnown RBP9.65□□□□□ -0.87
BDNF-204ENST00000395980 LIG3P49916 1009 aa9.65□□□□□ -0.87
BDNF-204ENST00000395980 GRM4Q14833 912 aa9.65□□□□□ -0.87
BDNF-204ENST00000395980 CFAP221Q4G0U5 840 aa9.65□□□□□ -0.87
BDNF-204ENST00000395980 KRT26Q7Z3Y9 468 aa9.65□□□□□ -0.87
BDNF-204ENST00000395980 NOX5Q96PH1 765 aa9.65□□□□□ -0.87
BDNF-204ENST00000395980 PP2D1A8MPX8 630 aa9.64□□□□□ -0.87
BDNF-204ENST00000395980 RBAK-RBAKDNI3L0D1 243 aa9.64□□□□□ -0.87
BDNF-204ENST00000395980 AKR1B10O60218 316 aa9.64□□□□□ -0.87
BDNF-204ENST00000395980 FSBPO95073 299 aa9.64□□□□□ -0.87
BDNF-204ENST00000395980 VEGFAP15692 232 aaPredicted RBP9.64□□□□□ -0.87
BDNF-204ENST00000395980 ASIC1P78348 528 aa9.64□□□□□ -0.87
BDNF-204ENST00000395980 TYW1BQ6NUM6 668 aa9.64□□□□□ -0.87
BDNF-204ENST00000395980 NFRKBQ6P4R8 1299 aa9.64□□□□□ -0.87
BDNF-204ENST00000395980 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.64□□□□□ -0.87
BDNF-204ENST00000395980 CCDC91Q7Z6B0 441 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms