RNA–Protein interactions for RNA: ENST00000395841.6

RAE1-203, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-203ENST00000395841 CALCRLQ16602 461 aa12.65□□□□□ -0.38
RAE1-203ENST00000395841 DCAF8Q5TAQ9 597 aa12.65□□□□□ -0.38
RAE1-203ENST00000395841 APOBEC3HQ6NTF7 200 aaKnown RBP12.65□□□□□ -0.38
RAE1-203ENST00000395841 FLAD1Q8NFF5 587 aa12.65□□□□□ -0.38
RAE1-203ENST00000395841 NUP88Q99567 741 aaPredicted RBP12.65□□□□□ -0.38
RAE1-203ENST00000395841 JMJD4Q9H9V9 463 aa12.65□□□□□ -0.38
RAE1-203ENST00000395841 DDX41Q9UJV9 622 aaKnown RBP12.65□□□□□ -0.38
RAE1-203ENST00000395841 NRXN2Q9P2S2 1712 aa12.64□□□□□ -0.39
RAE1-203ENST00000395841 A0A1W2PQC6 194 aa12.64□□□□□ -0.39
RAE1-203ENST00000395841 TXKP42681 527 aa12.64□□□□□ -0.39
RAE1-203ENST00000395841 CACNB3P54284 484 aa12.64□□□□□ -0.39
RAE1-203ENST00000395841 ASIC1P78348 528 aa12.64□□□□□ -0.39
RAE1-203ENST00000395841 PDE4DQ08499 809 aa12.64□□□□□ -0.39
RAE1-203ENST00000395841 GPATCH4Q5T3I0 446 aaKnown RBP12.64□□□□□ -0.39
RAE1-203ENST00000395841 CYP26C1Q6V0L0 522 aa12.64□□□□□ -0.39
RAE1-203ENST00000395841 CLEC10AQ8IUN9 316 aa12.64□□□□□ -0.39
RAE1-203ENST00000395841 ADGRF4Q8IZF3 695 aa12.64□□□□□ -0.39
RAE1-203ENST00000395841 MB21D1Q8N884 522 aa12.64□□□□□ -0.39
RAE1-203ENST00000395841 EHD4Q9H223 541 aa12.64□□□□□ -0.39
RAE1-203ENST00000395841 RIC8AQ9NPQ8 531 aa12.64□□□□□ -0.39
RAE1-203ENST00000395841 MAGEC2Q9UBF1 373 aaPredicted RBP12.64□□□□□ -0.39
RAE1-203ENST00000395841 PPP1R1BQ9UD71 204 aaPredicted RBP12.64□□□□□ -0.39
RAE1-203ENST00000395841 ATF5Q9Y2D1 282 aaPredicted RBP12.64□□□□□ -0.39
RAE1-203ENST00000395841 BICDL2A1A5D9 508 aa12.64□□□□□ -0.39
RAE1-203ENST00000395841 EFCAB8A8MWE9 144 aa12.64□□□□□ -0.39
RAE1-203ENST00000395841 TADA3O75528 432 aa12.64□□□□□ -0.39
RAE1-203ENST00000395841 H2AFXP16104 143 aaPredicted RBP12.64□□□□□ -0.39
RAE1-203ENST00000395841 SF3B2Q13435 895 aaKnown RBP12.64□□□□□ -0.39
RAE1-203ENST00000395841 TMEM266Q2M3C6 531 aa12.64□□□□□ -0.39
RAE1-203ENST00000395841 COBLL1Q53SF7 1204 aa12.64□□□□□ -0.39
RAE1-203ENST00000395841 SMAP1Q8IYB5 467 aaPredicted RBP12.64□□□□□ -0.39
RAE1-203ENST00000395841 UBXN4Q92575 508 aa12.64□□□□□ -0.39
RAE1-203ENST00000395841 P2RX5Q93086 422 aa12.64□□□□□ -0.39
RAE1-203ENST00000395841 CARD6Q9BX69 1037 aa12.64□□□□□ -0.39
RAE1-203ENST00000395841 LRWD1Q9UFC0 647 aa12.64□□□□□ -0.39
RAE1-203ENST00000395841 MRFAP1Q9Y605 127 aa12.64□□□□□ -0.39
RAE1-203ENST00000395841 SLX4Q8IY92 1834 aa12.64□□□□□ -0.39
RAE1-203ENST00000395841 CCNE1P24864 410 aa12.63□□□□□ -0.39
RAE1-203ENST00000395841 PDIA5Q14554 519 aa12.63□□□□□ -0.39
RAE1-203ENST00000395841 AOC3Q16853 763 aa12.63□□□□□ -0.39
RAE1-203ENST00000395841 ZNF507Q8TCN5 953 aa12.63□□□□□ -0.39
RAE1-203ENST00000395841 DUSP9Q99956 384 aaKnown RBP12.63□□□□□ -0.39
RAE1-203ENST00000395841 RAB34Q9BZG1 259 aa12.63□□□□□ -0.39
RAE1-203ENST00000395841 LZTFL1Q9NQ48 299 aa12.63□□□□□ -0.39
RAE1-203ENST00000395841 STK17AQ9UEE5 414 aa12.63□□□□□ -0.39
RAE1-203ENST00000395841 RNF225M0QZC1 329 aaPredicted RBP12.63□□□□□ -0.39
RAE1-203ENST00000395841 SLC37A4O43826 429 aa12.63□□□□□ -0.39
RAE1-203ENST00000395841 KIF5CO60282 957 aa12.63□□□□□ -0.39
RAE1-203ENST00000395841 KRT9P35527 623 aa12.63□□□□□ -0.39
RAE1-203ENST00000395841 ERVK-24P63145 666 aa12.63□□□□□ -0.39
RAE1-203ENST00000395841 GRB10Q13322 594 aa12.63□□□□□ -0.39
RAE1-203ENST00000395841 ARHGAP29Q52LW3 1261 aa12.63□□□□□ -0.39
RAE1-203ENST00000395841 CNNM4Q6P4Q7 775 aa12.63□□□□□ -0.39
RAE1-203ENST00000395841 SV2BQ7L1I2 683 aa12.63□□□□□ -0.39
RAE1-203ENST00000395841 PODNQ7Z5L7 613 aa12.63□□□□□ -0.39
RAE1-203ENST00000395841 KIAA0825Q8IV33 1275 aa12.63□□□□□ -0.39
RAE1-203ENST00000395841 CSGALNACT2Q8N6G5 542 aa12.63□□□□□ -0.39
RAE1-203ENST00000395841 CCDC17Q96LX7 622 aa12.63□□□□□ -0.39
RAE1-203ENST00000395841 MPHOSPH10O00566 681 aaKnown RBP12.62□□□□□ -0.39
RAE1-203ENST00000395841 EDIL3O43854 480 aa12.62□□□□□ -0.39
RAE1-203ENST00000395841 PPP1R11O60927 126 aaPredicted RBP12.62□□□□□ -0.39
RAE1-203ENST00000395841 TDP2O95551 362 aa12.62□□□□□ -0.39
RAE1-203ENST00000395841 CRKP46108 304 aa12.62□□□□□ -0.39
RAE1-203ENST00000395841 CLK2P49760 499 aaKnown RBP12.62□□□□□ -0.39
RAE1-203ENST00000395841 STK4Q13043 487 aa12.62□□□□□ -0.39
RAE1-203ENST00000395841 PPP4R3AQ6IN85 833 aa12.62□□□□□ -0.39
RAE1-203ENST00000395841 MTMR8Q96EF0 704 aa12.62□□□□□ -0.39
RAE1-203ENST00000395841 ZDHHC15Q96MV8 337 aa12.62□□□□□ -0.39
RAE1-203ENST00000395841 ZBTB5O15062 677 aa12.62□□□□□ -0.39
RAE1-203ENST00000395841 TNNI2P48788 182 aa12.62□□□□□ -0.39
RAE1-203ENST00000395841 DNM2P50570 870 aa12.62□□□□□ -0.39
RAE1-203ENST00000395841 NFIAQ12857 509 aa12.62□□□□□ -0.39
RAE1-203ENST00000395841 CCDC96Q2M329 555 aa12.62□□□□□ -0.39
RAE1-203ENST00000395841 TTBK2Q6IQ55 1244 aa12.62□□□□□ -0.39
RAE1-203ENST00000395841 FAM114A1Q8IWE2 563 aa12.62□□□□□ -0.39
RAE1-203ENST00000395841 CUL5Q93034 780 aa12.62□□□□□ -0.39
RAE1-203ENST00000395841 MRIQ9BWK5 157 aa12.62□□□□□ -0.39
RAE1-203ENST00000395841 MRPL12P52815 198 aaKnown RBP12.61□□□□□ -0.39
RAE1-203ENST00000395841 PPP2R3AQ06190 1150 aa12.61□□□□□ -0.39
RAE1-203ENST00000395841 ANKRD40Q6AI12 368 aa12.61□□□□□ -0.39
RAE1-203ENST00000395841 CDK5RAP3Q96JB5 506 aa12.61□□□□□ -0.39
RAE1-203ENST00000395841 PNMA5Q96PV4 448 aa12.61□□□□□ -0.39
RAE1-203ENST00000395841 TUBGCP2Q9BSJ2 902 aa12.61□□□□□ -0.39
RAE1-203ENST00000395841 IRX2Q9BZI1 471 aaPredicted RBP12.61□□□□□ -0.39
RAE1-203ENST00000395841 DHX36Q9H2U1 1008 aaKnown RBP12.61□□□□□ -0.39
RAE1-203ENST00000395841 BLOC1S4Q9NUP1 217 aa12.61□□□□□ -0.39
RAE1-203ENST00000395841 PVALEFA0A1B0GWK0 134 aa12.61□□□□□ -0.39
RAE1-203ENST00000395841 TTC26A0AVF1 554 aa12.61□□□□□ -0.39
RAE1-203ENST00000395841 FCER1AP12319 257 aa12.61□□□□□ -0.39
RAE1-203ENST00000395841 BAG6P46379 1132 aa12.61□□□□□ -0.39
RAE1-203ENST00000395841 FKBP1AP62942 108 aaKnown RBP12.61□□□□□ -0.39
RAE1-203ENST00000395841 ATP2B2Q01814 1243 aa12.61□□□□□ -0.39
RAE1-203ENST00000395841 UBE2SQ16763 222 aa12.61□□□□□ -0.39
RAE1-203ENST00000395841 OR8K1Q8NGG5 319 aa12.61□□□□□ -0.39
RAE1-203ENST00000395841 DNAJC7Q99615 494 aa12.61□□□□□ -0.39
RAE1-203ENST00000395841 CAPN11Q9UMQ6 739 aa12.61□□□□□ -0.39
RAE1-203ENST00000395841 LUC7L2Q9Y383 392 aaKnown RBP12.61□□□□□ -0.39
RAE1-203ENST00000395841 ADAMTSL1Q8N6G6 1762 aa12.61□□□□□ -0.39
RAE1-203ENST00000395841 A0A0U1RQJ8 604 aa12.6□□□□□ -0.39
RAE1-203ENST00000395841 USP17L10C9JJH3 530 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms