RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 CYBAP13498 195 aa19.15■□□□□ 0.66
CXCL1-201ENST00000395761 NEK4P51957 841 aa19.15■□□□□ 0.66
CXCL1-201ENST00000395761 TBC1D32Q96NH3 1257 aa19.15■□□□□ 0.66
CXCL1-201ENST00000395761 NCOA5Q9HCD5 579 aaKnown RBP19.15■□□□□ 0.66
CXCL1-201ENST00000395761 SEC63Q9UGP8 760 aaKnown RBP19.15■□□□□ 0.66
CXCL1-201ENST00000395761 V9GY48 417 aaPredicted RBP19.15■□□□□ 0.66
CXCL1-201ENST00000395761 NID2Q14112 1375 aa19.15■□□□□ 0.66
CXCL1-201ENST00000395761 PPFIA3O75145 1194 aa19.14■□□□□ 0.65
CXCL1-201ENST00000395761 AK2P54819 239 aa19.14■□□□□ 0.65
CXCL1-201ENST00000395761 PPP2R5BQ15173 497 aa19.14■□□□□ 0.65
CXCL1-201ENST00000395761 MCF2L2Q86YR7 1114 aa19.14■□□□□ 0.65
CXCL1-201ENST00000395761 MSL3Q8N5Y2 521 aaKnown RBP19.14■□□□□ 0.65
CXCL1-201ENST00000395761 U2AF1L4Q8WU68 220 aaKnown RBP19.14■□□□□ 0.65
CXCL1-201ENST00000395761 ZNF274Q96GC6 653 aaPredicted RBP19.14■□□□□ 0.65
CXCL1-201ENST00000395761 COL20A1Q9P218 1284 aa19.14■□□□□ 0.65
CXCL1-201ENST00000395761 TPCN1Q9ULQ1 816 aa19.14■□□□□ 0.65
CXCL1-201ENST00000395761 MYH6P13533 1939 aa19.13■□□□□ 0.65
CXCL1-201ENST00000395761 CCDC196A0A1B0GTZ2 297 aa19.13■□□□□ 0.65
CXCL1-201ENST00000395761 SGPL1O95470 568 aa19.13■□□□□ 0.65
CXCL1-201ENST00000395761 CFBP00751 764 aa19.13■□□□□ 0.65
CXCL1-201ENST00000395761 CNGA1P29973 690 aa19.13■□□□□ 0.65
CXCL1-201ENST00000395761 TRAF1Q13077 416 aa19.13■□□□□ 0.65
CXCL1-201ENST00000395761 STK3Q13188 491 aa19.13■□□□□ 0.65
CXCL1-201ENST00000395761 NTRK3Q16288 839 aa19.13■□□□□ 0.65
CXCL1-201ENST00000395761 ARMCX2Q7L311 632 aa19.13■□□□□ 0.65
CXCL1-201ENST00000395761 SYTL5Q8TDW5 730 aaPredicted RBP19.13■□□□□ 0.65
CXCL1-201ENST00000395761 TAAR1Q96RJ0 339 aa19.13■□□□□ 0.65
CXCL1-201ENST00000395761 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.13■□□□□ 0.65
CXCL1-201ENST00000395761 SYNGAP1Q96PV0 1343 aa19.13■□□□□ 0.65
CXCL1-201ENST00000395761 KIAA0100Q14667 2235 aaKnown RBP19.12■□□□□ 0.65
CXCL1-201ENST00000395761 LCTP09848 1927 aa19.12■□□□□ 0.65
CXCL1-201ENST00000395761 ZNF865P0CJ78 1059 aaPredicted RBP19.12■□□□□ 0.65
CXCL1-201ENST00000395761 HOXA13P31271 388 aaPredicted RBP19.12■□□□□ 0.65
CXCL1-201ENST00000395761 GJA8P48165 433 aa19.12■□□□□ 0.65
CXCL1-201ENST00000395761 LHX8Q68G74 356 aa19.12■□□□□ 0.65
CXCL1-201ENST00000395761 NOL8Q76FK4 1167 aaKnown RBP19.12■□□□□ 0.65
CXCL1-201ENST00000395761 GPKOWQ92917 476 aaPredicted RBP eCLIP19.12■□□□□ 0.65
CXCL1-201ENST00000395761 SHISA4Q96DD7 197 aa19.12■□□□□ 0.65
CXCL1-201ENST00000395761 MAF1Q9H063 256 aa19.12■□□□□ 0.65
CXCL1-201ENST00000395761 ASB14A6NK59 587 aa19.11■□□□□ 0.65
CXCL1-201ENST00000395761 ALDH5A1P51649 535 aaPredicted RBP19.11■□□□□ 0.65
CXCL1-201ENST00000395761 HSD17B4P51659 736 aa19.11■□□□□ 0.65
CXCL1-201ENST00000395761 GHRHRQ02643 423 aa19.11■□□□□ 0.65
CXCL1-201ENST00000395761 HEATR3Q7Z4Q2 680 aa19.11■□□□□ 0.65
CXCL1-201ENST00000395761 PHKBQ93100 1093 aa19.11■□□□□ 0.65
CXCL1-201ENST00000395761 ADD3Q9UEY8 706 aaKnown RBP19.11■□□□□ 0.65
CXCL1-201ENST00000395761 CNPY2Q9Y2B0 182 aa19.11■□□□□ 0.65
CXCL1-201ENST00000395761 TFRCP02786 760 aaKnown RBP19.1■□□□□ 0.65
CXCL1-201ENST00000395761 ANO1Q5XXA6 986 aa19.1■□□□□ 0.65
CXCL1-201ENST00000395761 WWC2Q6AWC2 1192 aa19.1■□□□□ 0.65
CXCL1-201ENST00000395761 MORC4Q8TE76 937 aa19.1■□□□□ 0.65
CXCL1-201ENST00000395761 KATNBL1Q9H079 304 aa19.1■□□□□ 0.65
CXCL1-201ENST00000395761 CRISPLD2Q9H0B8 497 aa19.1■□□□□ 0.65
CXCL1-201ENST00000395761 DDX20Q9UHI6 824 aaKnown RBP19.1■□□□□ 0.65
CXCL1-201ENST00000395761 NRBP1Q9UHY1 535 aa19.1■□□□□ 0.65
CXCL1-201ENST00000395761 ZHX1Q9UKY1 873 aaPredicted RBP19.1■□□□□ 0.65
CXCL1-201ENST00000395761 GCOM1H8Y6P7 765 aaPredicted RBP19.09■□□□□ 0.65
CXCL1-201ENST00000395761 SEPT4O43236 478 aa19.09■□□□□ 0.65
CXCL1-201ENST00000395761 PRPF3O43395 683 aaKnown RBP19.09■□□□□ 0.65
CXCL1-201ENST00000395761 POLR2MP0CAP2 368 aa19.09■□□□□ 0.65
CXCL1-201ENST00000395761 IFNAR1P17181 557 aa19.09■□□□□ 0.65
CXCL1-201ENST00000395761 SCRN1Q12765 414 aa19.09■□□□□ 0.65
CXCL1-201ENST00000395761 ACVR2BQ13705 512 aa19.09■□□□□ 0.65
CXCL1-201ENST00000395761 ANKRD1Q15327 319 aa19.09■□□□□ 0.65
CXCL1-201ENST00000395761 TYW1BQ6NUM6 668 aa19.09■□□□□ 0.65
CXCL1-201ENST00000395761 EEPD1Q7L9B9 569 aa19.09■□□□□ 0.65
CXCL1-201ENST00000395761 DNERQ8NFT8 737 aa19.09■□□□□ 0.65
CXCL1-201ENST00000395761 SLKQ9H2G2 1235 aaPredicted RBP19.09■□□□□ 0.65
CXCL1-201ENST00000395761 PFKFB2O60825 505 aa19.08■□□□□ 0.64
CXCL1-201ENST00000395761 DTNBO60941 627 aa19.08■□□□□ 0.64
CXCL1-201ENST00000395761 LARGE1O95461 756 aa19.08■□□□□ 0.64
CXCL1-201ENST00000395761 PKN1Q16512 942 aa19.08■□□□□ 0.64
CXCL1-201ENST00000395761 ME3Q16798 604 aa19.08■□□□□ 0.64
CXCL1-201ENST00000395761 USP17L6PQ6QN14 398 aa19.08■□□□□ 0.64
CXCL1-201ENST00000395761 SAMD3Q8N6K7 520 aa19.08■□□□□ 0.64
CXCL1-201ENST00000395761 IL27Q8NEV9 243 aa19.08■□□□□ 0.64
CXCL1-201ENST00000395761 RMDN3Q96TC7 470 aa19.08■□□□□ 0.64
CXCL1-201ENST00000395761 SLC26A6Q9BXS9 759 aa19.08■□□□□ 0.64
CXCL1-201ENST00000395761 ABHD16BQ9H3Z7 469 aa19.08■□□□□ 0.64
CXCL1-201ENST00000395761 MAP3K20Q9NYL2 800 aaKnown RBP19.08■□□□□ 0.64
CXCL1-201ENST00000395761 BRCA2P51587 3418 aa19.08■□□□□ 0.64
CXCL1-201ENST00000395761 RBBP6Q7Z6E9 1792 aaKnown RBP19.08■□□□□ 0.64
CXCL1-201ENST00000395761 MCM3APO60318 1980 aa19.07■□□□□ 0.64
CXCL1-201ENST00000395761 STXBP3O00186 592 aa19.07■□□□□ 0.64
CXCL1-201ENST00000395761 MEIS2O14770 477 aa19.07■□□□□ 0.64
CXCL1-201ENST00000395761 EDNRBP24530 442 aa19.07■□□□□ 0.64
CXCL1-201ENST00000395761 RGS19P49795 217 aa19.07■□□□□ 0.64
CXCL1-201ENST00000395761 PFKFB3Q16875 520 aaPredicted RBP19.07■□□□□ 0.64
CXCL1-201ENST00000395761 FCHSD1Q86WN1 690 aa19.07■□□□□ 0.64
CXCL1-201ENST00000395761 FBXO16Q8IX29 292 aaPredicted RBP19.07■□□□□ 0.64
CXCL1-201ENST00000395761 NECAB1Q8N987 351 aa19.07■□□□□ 0.64
CXCL1-201ENST00000395761 NSUN6Q8TEA1 469 aaKnown RBP19.07■□□□□ 0.64
CXCL1-201ENST00000395761 LENG1Q96BZ8 264 aaPredicted RBP19.07■□□□□ 0.64
CXCL1-201ENST00000395761 PSTPIP2Q9H939 334 aa19.07■□□□□ 0.64
CXCL1-201ENST00000395761 PDGFCQ9NRA1 345 aa19.07■□□□□ 0.64
CXCL1-201ENST00000395761 OGDHLQ9ULD0 1010 aa19.07■□□□□ 0.64
CXCL1-201ENST00000395761 LOC102724159A0A0B4J2E5 919 aa19.06■□□□□ 0.64
CXCL1-201ENST00000395761 CPLX1O14810 134 aa19.06■□□□□ 0.64
CXCL1-201ENST00000395761 ADCY6O43306 1168 aa19.06■□□□□ 0.64
CXCL1-201ENST00000395761 SCG2P13521 617 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms