RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 EPS15P42566 896 aa7.52□□□□□ -1.21
AP3S1-202ENST00000395548 SND1Q7KZF4 910 aaKnown RBP eCLIP7.52□□□□□ -1.21
AP3S1-202ENST00000395548 CDC37L1Q7L3B6 337 aa7.52□□□□□ -1.21
AP3S1-202ENST00000395548 C2orf69Q8N8R5 385 aa7.52□□□□□ -1.21
AP3S1-202ENST00000395548 DPF3Q92784 378 aa7.52□□□□□ -1.21
AP3S1-202ENST00000395548 MISP3Q96FF7 219 aa7.52□□□□□ -1.21
AP3S1-202ENST00000395548 BRIP1Q9BX63 1249 aa7.52□□□□□ -1.21
AP3S1-202ENST00000395548 ADARB2Q9NS39 739 aaKnown RBP7.52□□□□□ -1.21
AP3S1-202ENST00000395548 PCDHA4Q9UN74 947 aa7.52□□□□□ -1.21
AP3S1-202ENST00000395548 TTF2Q9UNY4 1162 aaKnown RBP7.52□□□□□ -1.21
AP3S1-202ENST00000395548 TMEM265A0A087WTH1 108 aa7.51□□□□□ -1.21
AP3S1-202ENST00000395548 NFIXQ14938 502 aa7.51□□□□□ -1.21
AP3S1-202ENST00000395548 PPM1JQ5JR12 505 aa7.51□□□□□ -1.21
AP3S1-202ENST00000395548 PCNX4Q63HM2 1172 aa7.51□□□□□ -1.21
AP3S1-202ENST00000395548 RTKN2Q8IZC4 609 aa7.51□□□□□ -1.21
AP3S1-202ENST00000395548 NETO1Q8TDF5 533 aa7.51□□□□□ -1.21
AP3S1-202ENST00000395548 DUSP23Q9BVJ7 150 aa7.51□□□□□ -1.21
AP3S1-202ENST00000395548 GLIS2Q9BZE0 524 aaPredicted RBP7.51□□□□□ -1.21
AP3S1-202ENST00000395548 MKNK2Q9HBH9 465 aa7.51□□□□□ -1.21
AP3S1-202ENST00000395548 ZNF277Q9NRM2 450 aaPredicted RBP7.51□□□□□ -1.21
AP3S1-202ENST00000395548 MTMR10Q9NXD2 777 aa7.51□□□□□ -1.21
AP3S1-202ENST00000395548 NR2E3Q9Y5X4 410 aa7.51□□□□□ -1.21
AP3S1-202ENST00000395548 CSADQ9Y600 493 aa7.51□□□□□ -1.21
AP3S1-202ENST00000395548 LAMA3Q16787 3333 aa7.51□□□□□ -1.21
AP3S1-202ENST00000395548 LTN1O94822 1766 aa7.51□□□□□ -1.21
AP3S1-202ENST00000395548 KTN1Q86UP2 1357 aaKnown RBP7.5□□□□□ -1.21
AP3S1-202ENST00000395548 KIAA0100Q14667 2235 aaKnown RBP7.5□□□□□ -1.21
AP3S1-202ENST00000395548 ANKRD33BA6NCL7 494 aa7.5□□□□□ -1.21
AP3S1-202ENST00000395548 DCDC2CA8MYV0 355 aa7.5□□□□□ -1.21
AP3S1-202ENST00000395548 CELA3AP09093 270 aa7.5□□□□□ -1.21
AP3S1-202ENST00000395548 IARSP41252 1262 aaKnown RBP7.5□□□□□ -1.21
AP3S1-202ENST00000395548 TXKP42681 527 aa7.5□□□□□ -1.21
AP3S1-202ENST00000395548 MAP3K12Q12852 859 aa7.5□□□□□ -1.21
AP3S1-202ENST00000395548 STYK1Q6J9G0 422 aa7.5□□□□□ -1.21
AP3S1-202ENST00000395548 C12orf40Q86WS4 652 aa7.5□□□□□ -1.21
AP3S1-202ENST00000395548 KCT2Q8NC54 265 aa7.5□□□□□ -1.21
AP3S1-202ENST00000395548 BCL7CQ8WUZ0 217 aaPredicted RBP7.5□□□□□ -1.21
AP3S1-202ENST00000395548 ELMO3Q96BJ8 720 aa7.5□□□□□ -1.21
AP3S1-202ENST00000395548 ARMC5Q96C12 935 aa7.5□□□□□ -1.21
AP3S1-202ENST00000395548 PAK6Q9NQU5 681 aaPredicted RBP7.5□□□□□ -1.21
AP3S1-202ENST00000395548 PGAP2Q9UHJ9 254 aa7.5□□□□□ -1.21
AP3S1-202ENST00000395548 AK5Q9Y6K8 562 aa7.5□□□□□ -1.21
AP3S1-202ENST00000395548 ITGB4P16144 1822 aa7.5□□□□□ -1.21
AP3S1-202ENST00000395548 KDRP35968 1356 aa7.49□□□□□ -1.21
AP3S1-202ENST00000395548 RBBP6Q7Z6E9 1792 aaKnown RBP7.49□□□□□ -1.21
AP3S1-202ENST00000395548 LEFTY1O75610 366 aa7.49□□□□□ -1.21
AP3S1-202ENST00000395548 TBC1D8O95759 1140 aa7.49□□□□□ -1.21
AP3S1-202ENST00000395548 CRKLP46109 303 aaKnown RBP7.49□□□□□ -1.21
AP3S1-202ENST00000395548 AMPHP49418 695 aa7.49□□□□□ -1.21
AP3S1-202ENST00000395548 RING1Q06587 406 aa7.49□□□□□ -1.21
AP3S1-202ENST00000395548 NFXL1Q6ZNB6 911 aa7.49□□□□□ -1.21
AP3S1-202ENST00000395548 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.49□□□□□ -1.218e-8■□□□□ 10.9
AP3S1-202ENST00000395548 TOP6BLQ8N6T0 577 aa7.49□□□□□ -1.21
AP3S1-202ENST00000395548 GBA2Q9HCG7 927 aaPredicted RBP7.49□□□□□ -1.21
AP3S1-202ENST00000395548 PAPPA2Q9BXP8 1791 aa7.48□□□□□ -1.21
AP3S1-202ENST00000395548 HOXC9P31274 260 aa7.48□□□□□ -1.21
AP3S1-202ENST00000395548 ZBTB37Q5TC79 503 aa7.48□□□□□ -1.21
AP3S1-202ENST00000395548 NBPF6Q5VWK0 638 aa7.48□□□□□ -1.21
AP3S1-202ENST00000395548 FAM181AQ8N9Y4 354 aa7.48□□□□□ -1.21
AP3S1-202ENST00000395548 ZNF507Q8TCN5 953 aa7.48□□□□□ -1.21
AP3S1-202ENST00000395548 MASTLQ96GX5 879 aa7.48□□□□□ -1.21
AP3S1-202ENST00000395548 NBPF4Q96M43 638 aa7.48□□□□□ -1.21
AP3S1-202ENST00000395548 GTF2IRD1Q9UHL9 959 aa7.48□□□□□ -1.21
AP3S1-202ENST00000395548 VAV3Q9UKW4 847 aa7.48□□□□□ -1.21
AP3S1-202ENST00000395548 TRIM17Q9Y577 477 aa7.48□□□□□ -1.21
AP3S1-202ENST00000395548 CENPJQ9HC77 1338 aaPredicted RBP7.48□□□□□ -1.21
AP3S1-202ENST00000395548 ZNF831Q5JPB2 1677 aa7.47□□□□□ -1.21
AP3S1-202ENST00000395548 SCN11AQ9UI33 1791 aa7.47□□□□□ -1.21
AP3S1-202ENST00000395548 PRKCQQ04759 706 aa7.47□□□□□ -1.21
AP3S1-202ENST00000395548 CCDC85BQ15834 202 aaPredicted RBP7.47□□□□□ -1.21
AP3S1-202ENST00000395548 IFI16Q16666 785 aaKnown RBP7.47□□□□□ -1.21
AP3S1-202ENST00000395548 SLC4A8Q2Y0W8 1093 aa7.47□□□□□ -1.21
AP3S1-202ENST00000395548 RASIP1Q5U651 963 aa7.47□□□□□ -1.21
AP3S1-202ENST00000395548 TTBK2Q6IQ55 1244 aa7.47□□□□□ -1.21
AP3S1-202ENST00000395548 CBLL1Q75N03 491 aa7.47□□□□□ -1.21
AP3S1-202ENST00000395548 Q7L0L9 218 aa7.47□□□□□ -1.21
AP3S1-202ENST00000395548 HDXQ7Z353 690 aa7.47□□□□□ -1.21
AP3S1-202ENST00000395548 PLD6Q8N2A8 252 aaKnown RBP7.47□□□□□ -1.21
AP3S1-202ENST00000395548 FMNL2Q96PY5 1086 aa7.47□□□□□ -1.21
AP3S1-202ENST00000395548 DUSP9Q99956 384 aaKnown RBP7.47□□□□□ -1.21
AP3S1-202ENST00000395548 HTATIP2Q9BUP3 242 aa7.47□□□□□ -1.21
AP3S1-202ENST00000395548 RNF114Q9Y508 228 aa7.47□□□□□ -1.21
AP3S1-202ENST00000395548 MUC3AQ02505 3323 aa7.47□□□□□ -1.21
AP3S1-202ENST00000395548 WASHC2AQ641Q2 1341 aa7.47□□□□□ -1.21
AP3S1-202ENST00000395548 EVC2Q86UK5 1308 aa7.47□□□□□ -1.21
AP3S1-202ENST00000395548 RPTORQ8N122 1335 aa7.47□□□□□ -1.21
AP3S1-202ENST00000395548 NRXN2Q9P2S2 1712 aa7.47□□□□□ -1.21
AP3S1-202ENST00000395548 PIEZO1Q92508 2521 aa7.46□□□□□ -1.21
AP3S1-202ENST00000395548 NTF4P34130 210 aa7.46□□□□□ -1.22
AP3S1-202ENST00000395548 OXCT1P55809 520 aa7.46□□□□□ -1.22
AP3S1-202ENST00000395548 RPS26P62854 115 aaKnown RBP7.46□□□□□ -1.22
AP3S1-202ENST00000395548 OTOP1Q7RTM1 612 aa7.46□□□□□ -1.22
AP3S1-202ENST00000395548 NME9Q86XW9 330 aa7.46□□□□□ -1.22
AP3S1-202ENST00000395548 USHBP1Q8N6Y0 703 aa7.46□□□□□ -1.22
AP3S1-202ENST00000395548 GPRC5DQ9NZD1 345 aa7.46□□□□□ -1.22
AP3S1-202ENST00000395548 NARFQ9UHQ1 456 aa7.46□□□□□ -1.22
AP3S1-202ENST00000395548 SNCAIPQ9Y6H5 919 aa7.46□□□□□ -1.22
AP3S1-202ENST00000395548 TTC28Q96AY4 2481 aa7.46□□□□□ -1.22
AP3S1-202ENST00000395548 CARMIL3Q8ND23 1372 aa7.46□□□□□ -1.22
AP3S1-202ENST00000395548 IGF2BP3O00425 579 aaKnown RBP eCLIP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms