RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 A1CFQ9NQ94 594 aaKnown RBP15.94■□□□□ 0.14
SCAF11-203ENST00000395453 RNF146Q9NTX7 359 aa15.94■□□□□ 0.14
SCAF11-203ENST00000395453 ISY1Q9ULR0 285 aaKnown RBP15.94■□□□□ 0.14
SCAF11-203ENST00000395453 CHD7Q9P2D1 2997 aa15.93■□□□□ 0.14
SCAF11-203ENST00000395453 CSF2RAP15509 400 aa15.93■□□□□ 0.14
SCAF11-203ENST00000395453 NT5C2P49902 561 aa15.93■□□□□ 0.14
SCAF11-203ENST00000395453 CDK7P50613 346 aa15.93■□□□□ 0.14
SCAF11-203ENST00000395453 SNAP25P60880 206 aa15.93■□□□□ 0.14
SCAF11-203ENST00000395453 CCSAPQ6IQ19 270 aaPredicted RBP15.93■□□□□ 0.14
SCAF11-203ENST00000395453 ZNF365Q70YC5 407 aa15.93■□□□□ 0.14
SCAF11-203ENST00000395453 ARMCX2Q7L311 632 aa15.93■□□□□ 0.14
SCAF11-203ENST00000395453 CCDC144CPQ8IYA2 1237 aa15.93■□□□□ 0.14
SCAF11-203ENST00000395453 MTIF3Q9H2K0 278 aaKnown RBP15.93■□□□□ 0.14
SCAF11-203ENST00000395453 RANBP17Q9H2T7 1088 aaKnown RBP15.93■□□□□ 0.14
SCAF11-203ENST00000395453 RNF41Q9H4P4 317 aaPredicted RBP15.93■□□□□ 0.14
SCAF11-203ENST00000395453 SOWAHBA6NEL2 793 aa15.92■□□□□ 0.14
SCAF11-203ENST00000395453 ZNF213O14771 459 aa15.92■□□□□ 0.14
SCAF11-203ENST00000395453 ADCY6O43306 1168 aa15.92■□□□□ 0.14
SCAF11-203ENST00000395453 ICAM1P05362 532 aa15.92■□□□□ 0.14
SCAF11-203ENST00000395453 SNHG28P0DPA3 235 aa15.92■□□□□ 0.14
SCAF11-203ENST00000395453 PDHBP11177 359 aa15.92■□□□□ 0.14
SCAF11-203ENST00000395453 ALAS1P13196 640 aa15.92■□□□□ 0.14
SCAF11-203ENST00000395453 PDE4AP27815 886 aa15.92■□□□□ 0.14
SCAF11-203ENST00000395453 CCDC96Q2M329 555 aa15.92■□□□□ 0.14
SCAF11-203ENST00000395453 CCDC144BQ3MJ40 725 aa15.92■□□□□ 0.14
SCAF11-203ENST00000395453 MUM1L1Q5H9M0 696 aa15.92■□□□□ 0.14
SCAF11-203ENST00000395453 PCSK9Q8NBP7 692 aaKnown RBP15.92■□□□□ 0.14
SCAF11-203ENST00000395453 VTI1AQ96AJ9 217 aa15.92■□□□□ 0.14
SCAF11-203ENST00000395453 DSCC1Q9BVC3 393 aa15.92■□□□□ 0.14
SCAF11-203ENST00000395453 SLC28A3Q9HAS3 691 aa15.92■□□□□ 0.14
SCAF11-203ENST00000395453 DIAPH3Q9NSV4 1193 aa15.92■□□□□ 0.14
SCAF11-203ENST00000395453 CXXC1Q9P0U4 656 aaPredicted RBP15.92■□□□□ 0.14
SCAF11-203ENST00000395453 ZHX1Q9UKY1 873 aaPredicted RBP15.92■□□□□ 0.14
SCAF11-203ENST00000395453 MTMR7Q9Y216 660 aa15.92■□□□□ 0.14
SCAF11-203ENST00000395453 XIRP2A4UGR9 3374 aa15.92■□□□□ 0.14
SCAF11-203ENST00000395453 NEDD4P46934 1319 aa15.91■□□□□ 0.14
SCAF11-203ENST00000395453 ACRP10323 421 aa15.91■□□□□ 0.14
SCAF11-203ENST00000395453 CST5P28325 142 aaPredicted RBP15.91■□□□□ 0.14
SCAF11-203ENST00000395453 SLC16A2P36021 539 aa15.91■□□□□ 0.14
SCAF11-203ENST00000395453 NKX3-2P78367 333 aa15.91■□□□□ 0.14
SCAF11-203ENST00000395453 AAK1Q2M2I8 961 aa15.91■□□□□ 0.14
SCAF11-203ENST00000395453 SYDE2Q5VT97 1194 aa15.91■□□□□ 0.14
SCAF11-203ENST00000395453 ASTLQ6HA08 431 aaPredicted RBP15.91■□□□□ 0.14
SCAF11-203ENST00000395453 DGKHQ86XP1 1220 aa15.91■□□□□ 0.14
SCAF11-203ENST00000395453 HERVK_113Q902F9 699 aa15.91■□□□□ 0.14
SCAF11-203ENST00000395453 ESR2Q92731 530 aa15.91■□□□□ 0.14
SCAF11-203ENST00000395453 UPF3AQ9H1J1 476 aaKnown RBP15.91■□□□□ 0.14
SCAF11-203ENST00000395453 SPC25Q9HBM1 224 aa15.91■□□□□ 0.14
SCAF11-203ENST00000395453 CYP39A1Q9NYL5 469 aa15.91■□□□□ 0.14
SCAF11-203ENST00000395453 CCPG1Q9ULG6 757 aa15.91■□□□□ 0.14
SCAF11-203ENST00000395453 ARIH1Q9Y4X5 557 aaPredicted RBP15.91■□□□□ 0.14
SCAF11-203ENST00000395453 LAMA4Q16363 1823 aa15.9■□□□□ 0.14
SCAF11-203ENST00000395453 ASTN1O14525 1302 aa15.9■□□□□ 0.14
SCAF11-203ENST00000395453 A0A0U1RQG5 324 aaPredicted RBP15.9■□□□□ 0.14
SCAF11-203ENST00000395453 ASB14A6NK59 587 aa15.9■□□□□ 0.14
SCAF11-203ENST00000395453 ARVCFO00192 962 aa15.9■□□□□ 0.14
SCAF11-203ENST00000395453 TLR3O15455 904 aaKnown RBP15.9■□□□□ 0.14
SCAF11-203ENST00000395453 C6orf222P0C671 652 aaPredicted RBP15.9■□□□□ 0.14
SCAF11-203ENST00000395453 BMP1P13497 986 aa15.9■□□□□ 0.14
SCAF11-203ENST00000395453 GJA9P57773 515 aa15.9■□□□□ 0.14
SCAF11-203ENST00000395453 ZNF543Q08ER8 600 aa15.9■□□□□ 0.14
SCAF11-203ENST00000395453 ANKS1AQ92625 1134 aa15.9■□□□□ 0.14
SCAF11-203ENST00000395453 MS4A3Q96HJ5 214 aa15.9■□□□□ 0.14
SCAF11-203ENST00000395453 PPP1R12CQ9BZL4 782 aa15.9■□□□□ 0.14
SCAF11-203ENST00000395453 NKX2-4Q9H2Z4 354 aa15.9■□□□□ 0.14
SCAF11-203ENST00000395453 GPCPD1Q9NPB8 672 aa15.9■□□□□ 0.14
SCAF11-203ENST00000395453 IL23AQ9NPF7 189 aa15.9■□□□□ 0.14
SCAF11-203ENST00000395453 FRMPD2Q68DX3 1309 aaPredicted RBP15.89■□□□□ 0.13
SCAF11-203ENST00000395453 MYADML2A6NDP7 307 aa15.89■□□□□ 0.13
SCAF11-203ENST00000395453 CTAGE5O15320 804 aa15.89■□□□□ 0.13
SCAF11-203ENST00000395453 ASGR1P07306 291 aa15.89■□□□□ 0.13
SCAF11-203ENST00000395453 FAM126BQ8IXS8 530 aa15.89■□□□□ 0.13
SCAF11-203ENST00000395453 MORC4Q8TE76 937 aa15.89■□□□□ 0.13
SCAF11-203ENST00000395453 NECAB3Q96P71 396 aaPredicted RBP15.89■□□□□ 0.13
SCAF11-203ENST00000395453 LCTP09848 1927 aa15.88■□□□□ 0.13
SCAF11-203ENST00000395453 KDM4AO75164 1064 aa15.88■□□□□ 0.13
SCAF11-203ENST00000395453 FGBP02675 491 aa15.88■□□□□ 0.13
SCAF11-203ENST00000395453 GSPT1P15170 499 aaKnown RBP15.88■□□□□ 0.13
SCAF11-203ENST00000395453 IRX5P78411 483 aaPredicted RBP15.88■□□□□ 0.13
SCAF11-203ENST00000395453 CCDC178Q5BJE1 867 aa15.88■□□□□ 0.13
SCAF11-203ENST00000395453 TTC22Q5TAA0 569 aa15.88■□□□□ 0.13
SCAF11-203ENST00000395453 ZKSCAN3Q9BRR0 538 aa15.88■□□□□ 0.13
SCAF11-203ENST00000395453 IL25Q9H293 177 aa15.88■□□□□ 0.13
SCAF11-203ENST00000395453 CTNNA3Q9UI47 895 aa15.88■□□□□ 0.13
SCAF11-203ENST00000395453 PNMA2Q9UL42 364 aa15.88■□□□□ 0.13
SCAF11-203ENST00000395453 HCN4Q9Y3Q4 1203 aa15.88■□□□□ 0.13
SCAF11-203ENST00000395453 REV3LO60673 3130 aa15.87■□□□□ 0.13
SCAF11-203ENST00000395453 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.87■□□□□ 0.13
SCAF11-203ENST00000395453 CYP2C18P33260 490 aa15.87■□□□□ 0.13
SCAF11-203ENST00000395453 TNFAIP2Q03169 654 aa15.87■□□□□ 0.13
SCAF11-203ENST00000395453 BAATQ14032 418 aaPredicted RBP15.87■□□□□ 0.13
SCAF11-203ENST00000395453 IMMTQ16891 758 aaKnown RBP15.87■□□□□ 0.13
SCAF11-203ENST00000395453 GNASQ5JWF2 1037 aa15.87■□□□□ 0.13
SCAF11-203ENST00000395453 GPATCH4Q5T3I0 446 aaKnown RBP15.87■□□□□ 0.13
SCAF11-203ENST00000395453 TAPT1Q6NXT6 567 aa15.87■□□□□ 0.13
SCAF11-203ENST00000395453 NSMFQ6X4W1 530 aa15.87■□□□□ 0.13
SCAF11-203ENST00000395453 IQCA1Q86XH1 822 aa15.87■□□□□ 0.13
SCAF11-203ENST00000395453 CLEC4DQ8WXI8 215 aa15.87■□□□□ 0.13
SCAF11-203ENST00000395453 ZSWIM5Q9P217 1185 aa15.87■□□□□ 0.13
SCAF11-203ENST00000395453 GNEQ9Y223 722 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms