RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 C1QTNF1Q9BXJ1 281 aa18.82■□□□□ 0.6
SNCA-205ENST00000394991 CERS4Q9HA82 394 aa18.82■□□□□ 0.6
SNCA-205ENST00000394991 VTA1Q9NP79 307 aa18.82■□□□□ 0.6
SNCA-205ENST00000394991 TNKSO95271 1327 aa18.81■□□□□ 0.6
SNCA-205ENST00000394991 PLA2G6O60733 806 aa18.81■□□□□ 0.6
SNCA-205ENST00000394991 APPP05067 770 aa18.81■□□□□ 0.6
SNCA-205ENST00000394991 PFKMP08237 780 aa18.81■□□□□ 0.6
SNCA-205ENST00000394991 GNAT2P19087 354 aa18.81■□□□□ 0.6
SNCA-205ENST00000394991 MCCP23508 829 aa18.81■□□□□ 0.6
SNCA-205ENST00000394991 SLC1A4P43007 532 aa18.81■□□□□ 0.6
SNCA-205ENST00000394991 TFAP4Q01664 338 aa18.81■□□□□ 0.6
SNCA-205ENST00000394991 AAK1Q2M2I8 961 aa18.81■□□□□ 0.6
SNCA-205ENST00000394991 TMEM67Q5HYA8 995 aa18.81■□□□□ 0.6
SNCA-205ENST00000394991 KIAA1211Q6ZU35 1233 aa18.81■□□□□ 0.6
SNCA-205ENST00000394991 KCTD1Q719H9 257 aa18.81■□□□□ 0.6
SNCA-205ENST00000394991 PRR12Q9ULL5 1215 aa18.81■□□□□ 0.6
SNCA-205ENST00000394991 HOXD11P31277 338 aaPredicted RBP18.8■□□□□ 0.6
SNCA-205ENST00000394991 DUSP28Q4G0W2 176 aa18.8■□□□□ 0.6
SNCA-205ENST00000394991 EPHX3Q9H6B9 360 aa18.8■□□□□ 0.6
SNCA-205ENST00000394991 PATL2C9JE40 543 aaKnown RBP18.79■□□□□ 0.6
SNCA-205ENST00000394991 PURAQ00577 322 aaKnown RBP18.79■□□□□ 0.6
SNCA-205ENST00000394991 NSMFQ6X4W1 530 aa18.79■□□□□ 0.6
SNCA-205ENST00000394991 PPP1R13LQ8WUF5 828 aa18.79■□□□□ 0.6
SNCA-205ENST00000394991 SEC62Q99442 399 aaKnown RBP18.79■□□□□ 0.6
SNCA-205ENST00000394991 CCPG1Q9ULG6 757 aa18.79■□□□□ 0.6
SNCA-205ENST00000394991 GTPBP6O43824 516 aaPredicted RBP18.78■□□□□ 0.6
SNCA-205ENST00000394991 ZFYP08048 801 aaPredicted RBP18.78■□□□□ 0.6
SNCA-205ENST00000394991 SUPT20HL2P0C7V6 817 aa18.78■□□□□ 0.6
SNCA-205ENST00000394991 ALDH5A1P51649 535 aaPredicted RBP18.78■□□□□ 0.6
SNCA-205ENST00000394991 TAP1Q03518 808 aa18.78■□□□□ 0.6
SNCA-205ENST00000394991 PDE4BQ07343 736 aa18.78■□□□□ 0.6
SNCA-205ENST00000394991 PPARAQ07869 468 aa18.78■□□□□ 0.6
SNCA-205ENST00000394991 RCSD1Q6JBY9 416 aa18.78■□□□□ 0.6
SNCA-205ENST00000394991 SPRED2Q7Z698 418 aa18.78■□□□□ 0.6
SNCA-205ENST00000394991 SLC9A7Q96T83 725 aa18.78■□□□□ 0.6
SNCA-205ENST00000394991 LRFN3Q9BTN0 628 aa18.78■□□□□ 0.6
SNCA-205ENST00000394991 POLR3EQ9NVU0 708 aa18.78■□□□□ 0.6
SNCA-205ENST00000394991 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.78■□□□□ 0.6
SNCA-205ENST00000394991 TLL1O43897 1013 aa18.77■□□□□ 0.6
SNCA-205ENST00000394991 NMT2O60551 498 aa18.77■□□□□ 0.6
SNCA-205ENST00000394991 MYL3P08590 195 aa18.77■□□□□ 0.6
SNCA-205ENST00000394991 ARNTL2Q8WYA1 636 aa18.77■□□□□ 0.6
SNCA-205ENST00000394991 WDR11Q9BZH6 1224 aa18.77■□□□□ 0.6
SNCA-205ENST00000394991 IL17RBQ9NRM6 502 aa18.77■□□□□ 0.6
SNCA-205ENST00000394991 RBM47A0AV96 593 aaKnown RBP18.76■□□□□ 0.59
SNCA-205ENST00000394991 ICAM1P05362 532 aa18.76■□□□□ 0.59
SNCA-205ENST00000394991 BAATQ14032 418 aaPredicted RBP18.76■□□□□ 0.59
SNCA-205ENST00000394991 NBPF20Q3BBV1 942 aa18.76■□□□□ 0.59
SNCA-205ENST00000394991 KHSRPQ92945 711 aaKnown RBP eCLIP18.76■□□□□ 0.59
SNCA-205ENST00000394991 MTG1Q9BT17 334 aaPredicted RBP18.76■□□□□ 0.59
SNCA-205ENST00000394991 INCENPQ9NQS7 918 aa18.76■□□□□ 0.59
SNCA-205ENST00000394991 STX8Q9UNK0 236 aa18.76■□□□□ 0.59
SNCA-205ENST00000394991 COG5Q9UP83 839 aa18.76■□□□□ 0.59
SNCA-205ENST00000394991 MUC6Q6W4X9 2439 aa18.75■□□□□ 0.59
SNCA-205ENST00000394991 NFIBO00712 420 aa18.75■□□□□ 0.59
SNCA-205ENST00000394991 FOXP2O15409 715 aa18.75■□□□□ 0.59
SNCA-205ENST00000394991 IQCF3P0C7M6 154 aa18.75■□□□□ 0.59
SNCA-205ENST00000394991 ACTN1P12814 892 aa18.75■□□□□ 0.59
SNCA-205ENST00000394991 RFC2P35250 354 aa18.75■□□□□ 0.59
SNCA-205ENST00000394991 CPT1AP50416 773 aa18.75■□□□□ 0.59
SNCA-205ENST00000394991 GRB10Q13322 594 aa18.75■□□□□ 0.59
SNCA-205ENST00000394991 FAM47CQ5HY64 1035 aa18.75■□□□□ 0.59
SNCA-205ENST00000394991 TTBK2Q6IQ55 1244 aa18.75■□□□□ 0.59
SNCA-205ENST00000394991 HERC6Q8IVU3 1022 aa18.75■□□□□ 0.59
SNCA-205ENST00000394991 OR6J1Q8NGC5 347 aa18.75■□□□□ 0.59
SNCA-205ENST00000394991 PHOSPHO2Q8TCD6 241 aa18.75■□□□□ 0.59
SNCA-205ENST00000394991 NACAP1Q9BZK3 213 aa18.75■□□□□ 0.59
SNCA-205ENST00000394991 NAPBQ9H115 298 aa18.75■□□□□ 0.59
SNCA-205ENST00000394991 RANBP17Q9H2T7 1088 aaKnown RBP18.75■□□□□ 0.59
SNCA-205ENST00000394991 MTMR7Q9Y216 660 aa18.75■□□□□ 0.59
SNCA-205ENST00000394991 SIP14410 1827 aa18.74■□□□□ 0.59
SNCA-205ENST00000394991 LPXNO60711 386 aa18.74■□□□□ 0.59
SNCA-205ENST00000394991 SLC3A2P08195 630 aaKnown RBP18.74■□□□□ 0.59
SNCA-205ENST00000394991 SLC30A10Q6XR72 485 aa18.74■□□□□ 0.59
SNCA-205ENST00000394991 ADD3Q9UEY8 706 aaKnown RBP18.74■□□□□ 0.59
SNCA-205ENST00000394991 PIEZO1Q92508 2521 aa18.73■□□□□ 0.59
SNCA-205ENST00000394991 TSPY2A6NKD2 308 aa18.73■□□□□ 0.59
SNCA-205ENST00000394991 PITPNM1O00562 1244 aa18.73■□□□□ 0.59
SNCA-205ENST00000394991 SLC16A2P36021 539 aa18.73■□□□□ 0.59
SNCA-205ENST00000394991 NOVP48745 357 aa18.73■□□□□ 0.59
SNCA-205ENST00000394991 CTDSPL2Q05D32 466 aa18.73■□□□□ 0.59
SNCA-205ENST00000394991 CCDC96Q2M329 555 aa18.73■□□□□ 0.59
SNCA-205ENST00000394991 COPS5Q92905 334 aa18.73■□□□□ 0.59
SNCA-205ENST00000394991 GPATCH3Q96I76 525 aa18.73■□□□□ 0.59
SNCA-205ENST00000394991 CHMP4BQ9H444 224 aaKnown RBP18.73■□□□□ 0.59
SNCA-205ENST00000394991 C11orf16Q9NQ32 467 aa18.73■□□□□ 0.59
SNCA-205ENST00000394991 KIAA1217Q5T5P2 1943 aa18.72■□□□□ 0.59
SNCA-205ENST00000394991 LOC102724159A0A0B4J2E5 919 aa18.72■□□□□ 0.59
SNCA-205ENST00000394991 PWP2Q15269 919 aaKnown RBP18.72■□□□□ 0.59
SNCA-205ENST00000394991 PPP4R3BQ5MIZ7 849 aa18.72■□□□□ 0.59
SNCA-205ENST00000394991 ZMYM1Q5SVZ6 1142 aa18.72■□□□□ 0.59
SNCA-205ENST00000394991 C20orf194Q5TEA3 1177 aa18.72■□□□□ 0.59
SNCA-205ENST00000394991 NFRKBQ6P4R8 1299 aa18.72■□□□□ 0.59
SNCA-205ENST00000394991 BTNL9Q6UXG8 535 aa18.72■□□□□ 0.59
SNCA-205ENST00000394991 CLEC4DQ8WXI8 215 aa18.72■□□□□ 0.59
SNCA-205ENST00000394991 HLA-CQ95604 372 aa18.72■□□□□ 0.59
SNCA-205ENST00000394991 FTOQ9C0B1 505 aaKnown RBP eCLIP18.72■□□□□ 0.59
SNCA-205ENST00000394991 GPHNQ9NQX3 736 aaPredicted RBP18.72■□□□□ 0.59
SNCA-205ENST00000394991 HCN4Q9Y3Q4 1203 aa18.72■□□□□ 0.59
SNCA-205ENST00000394991 ARIH1Q9Y4X5 557 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms