RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 CERKLQ49MI3 558 aaPredicted RBP15.68■□□□□ 0.1
SNCA-204ENST00000394989 VPS16Q9H269 839 aa15.68■□□□□ 0.1
SNCA-204ENST00000394989 OGFRQ9NZT2 677 aa15.68■□□□□ 0.1
SNCA-204ENST00000394989 UTRNP46939 3433 aa15.68■□□□□ 0.1
SNCA-204ENST00000394989 YDJCA8MPS7 323 aa15.67■□□□□ 0.1
SNCA-204ENST00000394989 RXRBP28702 533 aa15.67■□□□□ 0.1
SNCA-204ENST00000394989 TNNI2P48788 182 aa15.67■□□□□ 0.1
SNCA-204ENST00000394989 FXR2P51116 673 aaKnown RBP eCLIP15.67■□□□□ 0.1
SNCA-204ENST00000394989 ETF1P62495 437 aaKnown RBP15.67■□□□□ 0.1
SNCA-204ENST00000394989 GRB10Q13322 594 aa15.67■□□□□ 0.1
SNCA-204ENST00000394989 PANX2Q96RD6 677 aa15.67■□□□□ 0.1
SNCA-204ENST00000394989 L2HGDHQ9H9P8 463 aa15.67■□□□□ 0.1
SNCA-204ENST00000394989 MAGEF1Q9HAY2 307 aa15.67■□□□□ 0.1
SNCA-204ENST00000394989 TAB2Q9NYJ8 693 aa15.67■□□□□ 0.1
SNCA-204ENST00000394989 FXR1P51114 621 aaKnown RBP eCLIP15.67■□□□□ 0.1
SNCA-204ENST00000394989 COPB1P53618 953 aaKnown RBP15.67■□□□□ 0.1
SNCA-204ENST00000394989 SLC15A2Q16348 729 aa15.67■□□□□ 0.1
SNCA-204ENST00000394989 CPLX3Q8WVH0 158 aa15.67■□□□□ 0.1
SNCA-204ENST00000394989 C7orf25Q9BPX7 421 aa15.67■□□□□ 0.1
SNCA-204ENST00000394989 BLOC1S4Q9NUP1 217 aa15.67■□□□□ 0.1
SNCA-204ENST00000394989 ITIH6Q6UXX5 1313 aa15.67■□□□□ 0.1
SNCA-204ENST00000394989 ARFGEF1Q9Y6D6 1849 aa15.67■□□□□ 0.1
SNCA-204ENST00000394989 POTEMA6NI47 508 aa15.67■□□□□ 0.1
SNCA-204ENST00000394989 SOWAHDA6NJG2 315 aa15.67■□□□□ 0.1
SNCA-204ENST00000394989 CCP110O43303 1012 aa15.67■□□□□ 0.1
SNCA-204ENST00000394989 CASP14P31944 242 aa15.67■□□□□ 0.1
SNCA-204ENST00000394989 JAG1P78504 1218 aa15.67■□□□□ 0.1
SNCA-204ENST00000394989 SEPT2Q15019 361 aa15.67■□□□□ 0.1
SNCA-204ENST00000394989 SYCP1Q15431 976 aa15.67■□□□□ 0.1
SNCA-204ENST00000394989 FILIP1LQ4L180 1135 aa15.67■□□□□ 0.1
SNCA-204ENST00000394989 ZSCAN29Q8IWY8 852 aaPredicted RBP15.67■□□□□ 0.1
SNCA-204ENST00000394989 PNMA5Q96PV4 448 aa15.67■□□□□ 0.1
SNCA-204ENST00000394989 NUDT12Q9BQG2 462 aa15.67■□□□□ 0.1
SNCA-204ENST00000394989 TDRD3Q9H7E2 651 aaKnown RBP15.67■□□□□ 0.1
SNCA-204ENST00000394989 NYAP2Q9P242 653 aa15.67■□□□□ 0.1
SNCA-204ENST00000394989 RNF225M0QZC1 329 aaPredicted RBP15.66■□□□□ 0.1
SNCA-204ENST00000394989 N4BP3O15049 544 aa15.66■□□□□ 0.1
SNCA-204ENST00000394989 MFAP3LO75121 409 aa15.66■□□□□ 0.1
SNCA-204ENST00000394989 NPM3O75607 178 aaKnown RBP15.66■□□□□ 0.1
SNCA-204ENST00000394989 STK4Q13043 487 aa15.66■□□□□ 0.1
SNCA-204ENST00000394989 EZH2Q15910 746 aaKnown RBP15.66■□□□□ 0.1
SNCA-204ENST00000394989 CCDC93Q567U6 631 aa15.66■□□□□ 0.1
SNCA-204ENST00000394989 CUL5Q93034 780 aa15.66■□□□□ 0.1
SNCA-204ENST00000394989 CNKSR1Q969H4 720 aa15.66■□□□□ 0.1
SNCA-204ENST00000394989 DESI2Q9BSY9 194 aa15.66■□□□□ 0.1
SNCA-204ENST00000394989 H7C1D1 291 aa15.66■□□□□ 0.1
SNCA-204ENST00000394989 PPP4R3AQ6IN85 833 aa15.66■□□□□ 0.1
SNCA-204ENST00000394989 TTI2Q6NXR4 508 aa15.66■□□□□ 0.1
SNCA-204ENST00000394989 GJA10Q969M2 543 aa15.66■□□□□ 0.1
SNCA-204ENST00000394989 KANSL2Q9H9L4 492 aa15.66■□□□□ 0.1
SNCA-204ENST00000394989 LRWD1Q9UFC0 647 aa15.66■□□□□ 0.1
SNCA-204ENST00000394989 ATF5Q9Y2D1 282 aaPredicted RBP15.66■□□□□ 0.1
SNCA-204ENST00000394989 ZSCAN12O43309 604 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 RAD21O60216 631 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 GDF11O95390 407 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 FCER1AP12319 257 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 SPAG1Q07617 926 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 HAS1Q92839 578 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 PRMT6Q96LA8 375 aaPredicted RBP15.65■□□□□ 0.1
SNCA-204ENST00000394989 PDGFDQ9GZP0 370 aaPredicted RBP15.65■□□□□ 0.1
SNCA-204ENST00000394989 PSTPIP2Q9H939 334 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 DNAI1Q9UI46 699 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 SLC1A4P43007 532 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 SEMA3FQ13275 785 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 RRP1BQ14684 758 aaKnown RBP15.65■□□□□ 0.1
SNCA-204ENST00000394989 QRICH1Q2TAL8 776 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 RAD9BQ6WBX8 426 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 PPFIBP1Q86W92 1011 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 HPS3Q969F9 1004 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 ATRNL1Q5VV63 1379 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 PHLPP2Q6ZVD8 1323 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 USP17L15C9J2P7 530 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 USP17L13C9JLJ4 530 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 USP17L11C9JVI0 530 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 USP17L18D6R9N7 530 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 USP17L22D6RA61 530 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 USP17L17D6RBQ6 530 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 USP17L19D6RCP7 530 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 USP17L20D6RJB6 530 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 PDE4DQ08499 809 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 USP17L24Q0WX57 530 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 SLFN13Q68D06 897 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 USP17L6PQ6QN14 398 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 CREBRFQ8IUR6 639 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 LRRN4CLQ8ND94 238 aa15.65■□□□□ 0.1
SNCA-204ENST00000394989 DUSP9Q99956 384 aaKnown RBP15.65■□□□□ 0.1
SNCA-204ENST00000394989 TUBB4AP04350 444 aa15.64■□□□□ 0.09
SNCA-204ENST00000394989 ASIC1P78348 528 aa15.64■□□□□ 0.09
SNCA-204ENST00000394989 EN1Q05925 392 aaPredicted RBP15.64■□□□□ 0.09
SNCA-204ENST00000394989 KIAA0895Q8NCT3 520 aa15.64■□□□□ 0.09
SNCA-204ENST00000394989 CALML4Q96GE6 196 aa15.64■□□□□ 0.09
SNCA-204ENST00000394989 C21orf2O43822 256 aa15.64■□□□□ 0.09
SNCA-204ENST00000394989 MRPL12P52815 198 aaKnown RBP15.64■□□□□ 0.09
SNCA-204ENST00000394989 ICA1Q05084 483 aa15.64■□□□□ 0.09
SNCA-204ENST00000394989 PDIA5Q14554 519 aa15.64■□□□□ 0.09
SNCA-204ENST00000394989 ECM1Q16610 540 aa15.64■□□□□ 0.09
SNCA-204ENST00000394989 AEBP2Q6ZN18 517 aaPredicted RBP15.64■□□□□ 0.09
SNCA-204ENST00000394989 KCNK18Q7Z418 384 aa15.64■□□□□ 0.09
SNCA-204ENST00000394989 DCAF4Q8WV16 495 aa15.64■□□□□ 0.09
SNCA-204ENST00000394989 EEF2KMTQ96G04 330 aa15.64■□□□□ 0.09
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