RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 HMX1Q9NP08 348 aaPredicted RBP23.03■■□□□ 1.28
SNCA-203ENST00000394986 V9GY48 417 aaPredicted RBP23.03■■□□□ 1.28
SNCA-203ENST00000394986 ZNFX1Q9P2E3 1918 aaKnown RBP23.03■■□□□ 1.28
SNCA-203ENST00000394986 CCDC196A0A1B0GTZ2 297 aa23.02■■□□□ 1.28
SNCA-203ENST00000394986 CYBAP13498 195 aa23.02■■□□□ 1.28
SNCA-203ENST00000394986 ZNF467Q7Z7K2 595 aaPredicted RBP23.02■■□□□ 1.28
SNCA-203ENST00000394986 PHKBQ93100 1093 aa23.02■■□□□ 1.28
SNCA-203ENST00000394986 PAK6Q9NQU5 681 aaPredicted RBP23.02■■□□□ 1.28
SNCA-203ENST00000394986 COL20A1Q9P218 1284 aa23.02■■□□□ 1.28
SNCA-203ENST00000394986 BRCA2P51587 3418 aa23.02■■□□□ 1.27
SNCA-203ENST00000394986 PPP2R5BQ15173 497 aa23.01■■□□□ 1.27
SNCA-203ENST00000394986 MAMDC4Q6UXC1 1216 aa23.01■■□□□ 1.27
SNCA-203ENST00000394986 ARMCX2Q7L311 632 aa23.01■■□□□ 1.27
SNCA-203ENST00000394986 HEATR3Q7Z4Q2 680 aa23.01■■□□□ 1.27
SNCA-203ENST00000394986 MCF2L2Q86YR7 1114 aa23.01■■□□□ 1.27
SNCA-203ENST00000394986 RGS22Q8NE09 1264 aa23.01■■□□□ 1.27
SNCA-203ENST00000394986 DEFB118Q96PH6 123 aa23.01■■□□□ 1.27
SNCA-203ENST00000394986 PLXNA1Q9UIW2 1896 aa23.01■■□□□ 1.27
SNCA-203ENST00000394986 LCTP09848 1927 aa23.01■■□□□ 1.27
SNCA-203ENST00000394986 LARGE1O95461 756 aa23■■□□□ 1.27
SNCA-203ENST00000394986 SNAI1O95863 264 aaPredicted RBP23■■□□□ 1.27
SNCA-203ENST00000394986 CNGA1P29973 690 aa23■■□□□ 1.27
SNCA-203ENST00000394986 HOXA13P31271 388 aaPredicted RBP23■■□□□ 1.27
SNCA-203ENST00000394986 NTRK3Q16288 839 aa23■■□□□ 1.27
SNCA-203ENST00000394986 WWC2Q6AWC2 1192 aa23■■□□□ 1.27
SNCA-203ENST00000394986 SYTL5Q8TDW5 730 aaPredicted RBP23■■□□□ 1.27
SNCA-203ENST00000394986 CDKN2AIPQ9NXV6 580 aaPredicted RBP23■■□□□ 1.27
SNCA-203ENST00000394986 SYNGAP1Q96PV0 1343 aa23■■□□□ 1.27
SNCA-203ENST00000394986 DTNBO60941 627 aa22.99■■□□□ 1.27
SNCA-203ENST00000394986 GJB1P08034 283 aa22.99■■□□□ 1.27
SNCA-203ENST00000394986 EN2P19622 333 aaPredicted RBP22.99■■□□□ 1.27
SNCA-203ENST00000394986 ALDH5A1P51649 535 aaPredicted RBP22.99■■□□□ 1.27
SNCA-203ENST00000394986 TRAF1Q13077 416 aa22.99■■□□□ 1.27
SNCA-203ENST00000394986 ANKRD1Q15327 319 aa22.99■■□□□ 1.27
SNCA-203ENST00000394986 MSL3Q8N5Y2 521 aaKnown RBP22.99■■□□□ 1.27
SNCA-203ENST00000394986 TBC1D32Q96NH3 1257 aa22.99■■□□□ 1.27
SNCA-203ENST00000394986 TAAR1Q96RJ0 339 aa22.99■■□□□ 1.27
SNCA-203ENST00000394986 MYH6P13533 1939 aa22.99■■□□□ 1.27
SNCA-203ENST00000394986 HSD17B4P51659 736 aa22.99■■□□□ 1.27
SNCA-203ENST00000394986 SCRN1Q12765 414 aa22.99■■□□□ 1.27
SNCA-203ENST00000394986 U2AF1L4Q8WU68 220 aaKnown RBP22.99■■□□□ 1.27
SNCA-203ENST00000394986 SHISA4Q96DD7 197 aa22.99■■□□□ 1.27
SNCA-203ENST00000394986 ZNF865P0CJ78 1059 aaPredicted RBP22.98■■□□□ 1.27
SNCA-203ENST00000394986 IFNAR1P17181 557 aa22.98■■□□□ 1.27
SNCA-203ENST00000394986 ANO1Q5XXA6 986 aa22.98■■□□□ 1.27
SNCA-203ENST00000394986 TYW1BQ6NUM6 668 aa22.98■■□□□ 1.27
SNCA-203ENST00000394986 SLC26A6Q9BXS9 759 aa22.98■■□□□ 1.27
SNCA-203ENST00000394986 SLKQ9H2G2 1235 aaPredicted RBP22.98■■□□□ 1.27
SNCA-203ENST00000394986 ADD3Q9UEY8 706 aaKnown RBP22.98■■□□□ 1.27
SNCA-203ENST00000394986 ZHX1Q9UKY1 873 aaPredicted RBP22.98■■□□□ 1.27
SNCA-203ENST00000394986 CNPY2Q9Y2B0 182 aa22.98■■□□□ 1.27
SNCA-203ENST00000394986 RBBP6Q7Z6E9 1792 aaKnown RBP22.97■■□□□ 1.27
SNCA-203ENST00000394986 ASB14A6NK59 587 aa22.97■■□□□ 1.27
SNCA-203ENST00000394986 PFKFB2O60825 505 aa22.97■■□□□ 1.27
SNCA-203ENST00000394986 GHRHRQ02643 423 aa22.97■■□□□ 1.27
SNCA-203ENST00000394986 ME3Q16798 604 aa22.97■■□□□ 1.27
SNCA-203ENST00000394986 EEPD1Q7L9B9 569 aa22.97■■□□□ 1.27
SNCA-203ENST00000394986 NECAB1Q8N987 351 aa22.97■■□□□ 1.27
SNCA-203ENST00000394986 GCOM1H8Y6P7 765 aaPredicted RBP22.96■■□□□ 1.27
SNCA-203ENST00000394986 CPLX1O14810 134 aa22.96■■□□□ 1.27
SNCA-203ENST00000394986 SGPL1O95470 568 aa22.96■■□□□ 1.27
SNCA-203ENST00000394986 POLR2MP0CAP2 368 aa22.96■■□□□ 1.27
SNCA-203ENST00000394986 GJA8P48165 433 aa22.96■■□□□ 1.27
SNCA-203ENST00000394986 ACVR2BQ13705 512 aa22.96■■□□□ 1.27
SNCA-203ENST00000394986 PKN1Q16512 942 aa22.96■■□□□ 1.27
SNCA-203ENST00000394986 FCHSD1Q86WN1 690 aa22.96■■□□□ 1.27
SNCA-203ENST00000394986 FBXO16Q8IX29 292 aaPredicted RBP22.96■■□□□ 1.27
SNCA-203ENST00000394986 LENG1Q96BZ8 264 aaPredicted RBP22.96■■□□□ 1.27
SNCA-203ENST00000394986 KATNBL1Q9H079 304 aa22.96■■□□□ 1.27
SNCA-203ENST00000394986 DDX20Q9UHI6 824 aaKnown RBP22.96■■□□□ 1.27
SNCA-203ENST00000394986 STXBP3O00186 592 aa22.95■■□□□ 1.26
SNCA-203ENST00000394986 PRPF3O43395 683 aaKnown RBP22.95■■□□□ 1.26
SNCA-203ENST00000394986 SCG2P13521 617 aa22.95■■□□□ 1.26
SNCA-203ENST00000394986 EIF2AK2P19525 551 aaKnown RBP22.95■■□□□ 1.26
SNCA-203ENST00000394986 NAPAP54920 295 aa22.95■■□□□ 1.26
SNCA-203ENST00000394986 PFKFB3Q16875 520 aaPredicted RBP22.95■■□□□ 1.26
SNCA-203ENST00000394986 IFFO2Q5TF58 517 aa22.95■■□□□ 1.26
SNCA-203ENST00000394986 LHX8Q68G74 356 aa22.95■■□□□ 1.26
SNCA-203ENST00000394986 USP17L6PQ6QN14 398 aa22.95■■□□□ 1.26
SNCA-203ENST00000394986 DNERQ8NFT8 737 aa22.95■■□□□ 1.26
SNCA-203ENST00000394986 RMDN3Q96TC7 470 aa22.95■■□□□ 1.26
SNCA-203ENST00000394986 NRBP1Q9UHY1 535 aa22.95■■□□□ 1.26
SNCA-203ENST00000394986 KIAA0100Q14667 2235 aaKnown RBP22.94■■□□□ 1.26
SNCA-203ENST00000394986 SEPT4O43236 478 aa22.94■■□□□ 1.26
SNCA-203ENST00000394986 RABEP1Q15276 862 aa22.94■■□□□ 1.26
SNCA-203ENST00000394986 MORC4Q8TE76 937 aa22.94■■□□□ 1.26
SNCA-203ENST00000394986 RNF26Q9BY78 433 aaPredicted RBP22.94■■□□□ 1.26
SNCA-203ENST00000394986 MAF1Q9H063 256 aa22.94■■□□□ 1.26
SNCA-203ENST00000394986 ABHD16BQ9H3Z7 469 aa22.94■■□□□ 1.26
SNCA-203ENST00000394986 BARHL2Q9NY43 387 aa22.94■■□□□ 1.26
SNCA-203ENST00000394986 MEIS2O14770 477 aa22.93■■□□□ 1.26
SNCA-203ENST00000394986 TFRCP02786 760 aaKnown RBP22.93■■□□□ 1.26
SNCA-203ENST00000394986 EDNRBP24530 442 aa22.93■■□□□ 1.26
SNCA-203ENST00000394986 AKAP17AQ02040 695 aaKnown RBP22.93■■□□□ 1.26
SNCA-203ENST00000394986 UBE2SQ16763 222 aa22.93■■□□□ 1.26
SNCA-203ENST00000394986 CRISPLD2Q9H0B8 497 aa22.93■■□□□ 1.26
SNCA-203ENST00000394986 PSTPIP2Q9H939 334 aa22.93■■□□□ 1.26
SNCA-203ENST00000394986 PXMP2Q9NR77 195 aa22.93■■□□□ 1.26
SNCA-203ENST00000394986 ADCY6O43306 1168 aa22.92■■□□□ 1.26
SNCA-203ENST00000394986 PDE4DQ08499 809 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms