RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 DAAM2Q86T65 1068 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 COG1Q8WTW3 980 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 PAGE5Q96GU1 130 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 VEZTQ9HBM0 779 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 SEC31BQ9NQW1 1179 aa9.78□□□□□ -0.84
RTN4-206ENST00000394611 ZMYM6O95789 1325 aa9.77□□□□□ -0.84
RTN4-206ENST00000394611 LGR5O75473 907 aa9.77□□□□□ -0.85
RTN4-206ENST00000394611 DTHD1Q6ZMT9 781 aa9.77□□□□□ -0.85
RTN4-206ENST00000394611 B4GALNT4Q76KP1 1039 aa9.77□□□□□ -0.85
RTN4-206ENST00000394611 CCDC125Q86Z20 511 aa9.77□□□□□ -0.85
RTN4-206ENST00000394611 EHBP1Q8NDI1 1231 aa9.77□□□□□ -0.85
RTN4-206ENST00000394611 ENOX1Q8TC92 643 aaKnown RBP9.77□□□□□ -0.85
RTN4-206ENST00000394611 NAA15Q9BXJ9 866 aaKnown RBP9.77□□□□□ -0.85
RTN4-206ENST00000394611 UBN2Q6ZU65 1347 aa9.77□□□□□ -0.85
RTN4-206ENST00000394611 PDE6AP16499 860 aa9.77□□□□□ -0.85
RTN4-206ENST00000394611 ARID4AP29374 1257 aaPredicted RBP9.77□□□□□ -0.85
RTN4-206ENST00000394611 ANTXR2P58335 489 aa9.77□□□□□ -0.85
RTN4-206ENST00000394611 SARNPP82979 210 aaKnown RBP9.77□□□□□ -0.85
RTN4-206ENST00000394611 MYO1EQ12965 1108 aa9.77□□□□□ -0.85
RTN4-206ENST00000394611 BIRC2Q13490 618 aa9.77□□□□□ -0.85
RTN4-206ENST00000394611 MUM1L1Q5H9M0 696 aa9.77□□□□□ -0.85
RTN4-206ENST00000394611 RESP18Q5W5W9 173 aa9.77□□□□□ -0.85
RTN4-206ENST00000394611 TAB3Q8N5C8 712 aaPredicted RBP9.77□□□□□ -0.85
RTN4-206ENST00000394611 TUBGCP2Q9BSJ2 902 aa9.77□□□□□ -0.85
RTN4-206ENST00000394611 LACRTQ9GZZ8 138 aa9.77□□□□□ -0.85
RTN4-206ENST00000394611 HAUS2Q9NVX0 235 aa9.77□□□□□ -0.85
RTN4-206ENST00000394611 TNKSO95271 1327 aa9.77□□□□□ -0.85
RTN4-206ENST00000394611 ZNF831Q5JPB2 1677 aa9.77□□□□□ -0.85
RTN4-206ENST00000394611 DEXIO95424 95 aa9.77□□□□□ -0.85
RTN4-206ENST00000394611 BCAMP50895 628 aa9.77□□□□□ -0.85
RTN4-206ENST00000394611 CORO7P57737 925 aa9.77□□□□□ -0.85
RTN4-206ENST00000394611 FAM47EQ6ZV65 393 aa9.77□□□□□ -0.85
RTN4-206ENST00000394611 KLHL34Q8N239 644 aa9.77□□□□□ -0.85
RTN4-206ENST00000394611 ESR2Q92731 530 aa9.77□□□□□ -0.85
RTN4-206ENST00000394611 YIPF3Q9GZM5 350 aa9.77□□□□□ -0.85
RTN4-206ENST00000394611 NHEJ1Q9H9Q4 299 aaPredicted RBP9.77□□□□□ -0.85
RTN4-206ENST00000394611 NOVA2Q9UNW9 492 aaKnown RBP9.77□□□□□ -0.85
RTN4-206ENST00000394611 CNTNAP4Q9C0A0 1308 aa9.77□□□□□ -0.85
RTN4-206ENST00000394611 ATP8B1O43520 1251 aa9.76□□□□□ -0.85
RTN4-206ENST00000394611 GREM2Q9H772 168 aa9.76□□□□□ -0.85
RTN4-206ENST00000394611 COPRSQ9NQ92 184 aa9.76□□□□□ -0.85
RTN4-206ENST00000394611 TFCP2L1Q9NZI6 479 aa9.76□□□□□ -0.85
RTN4-206ENST00000394611 SAP30BPQ9UHR5 308 aaKnown RBP9.76□□□□□ -0.85
RTN4-206ENST00000394611 HPCAL4Q9UM19 191 aa9.76□□□□□ -0.85
RTN4-206ENST00000394611 ATP8A1Q9Y2Q0 1164 aa9.76□□□□□ -0.85
RTN4-206ENST00000394611 GCOM1H8Y6P7 765 aaPredicted RBP9.76□□□□□ -0.85
RTN4-206ENST00000394611 TULP2O00295 520 aa9.76□□□□□ -0.85
RTN4-206ENST00000394611 ZFYP08048 801 aaPredicted RBP9.76□□□□□ -0.85
RTN4-206ENST00000394611 MYZAPP0CAP1 466 aa9.76□□□□□ -0.85
RTN4-206ENST00000394611 PDHBP11177 359 aa9.76□□□□□ -0.85
RTN4-206ENST00000394611 NR1D1P20393 614 aa9.76□□□□□ -0.85
RTN4-206ENST00000394611 TNNI2P48788 182 aa9.76□□□□□ -0.85
RTN4-206ENST00000394611 IFNL3Q8IZI9 196 aa9.76□□□□□ -0.85
RTN4-206ENST00000394611 CCDC155Q8N6L0 562 aa9.76□□□□□ -0.85
RTN4-206ENST00000394611 FANCBQ8NB91 859 aa9.76□□□□□ -0.85
RTN4-206ENST00000394611 RTCBQ9Y3I0 505 aaKnown RBP9.76□□□□□ -0.85
RTN4-206ENST00000394611 H0Y3Z8 333 aa9.76□□□□□ -0.85
RTN4-206ENST00000394611 CCNT1O60563 726 aaKnown RBP9.76□□□□□ -0.85
RTN4-206ENST00000394611 RPN1P04843 607 aaKnown RBP9.76□□□□□ -0.85
RTN4-206ENST00000394611 EIF4A3P38919 411 aaKnown RBP9.76□□□□□ -0.85
RTN4-206ENST00000394611 IL6STP40189 918 aaPredicted RBP9.76□□□□□ -0.85
RTN4-206ENST00000394611 TECP42680 631 aa9.76□□□□□ -0.85
RTN4-206ENST00000394611 HDLBPQ00341 1268 aaKnown RBP9.76□□□□□ -0.85
RTN4-206ENST00000394611 CCDC38Q502W7 563 aa9.76□□□□□ -0.85
RTN4-206ENST00000394611 HAUS4Q9H6D7 363 aa9.76□□□□□ -0.85
RTN4-206ENST00000394611 PIH1D3Q9NQM4 214 aaKnown RBP9.76□□□□□ -0.85
RTN4-206ENST00000394611 CICQ96RK0 1608 aaPredicted RBP9.76□□□□□ -0.85
RTN4-206ENST00000394611 COL15A1P39059 1388 aa9.76□□□□□ -0.85
RTN4-206ENST00000394611 A0A1B0GUA9 196 aa9.75□□□□□ -0.85
RTN4-206ENST00000394611 RNF225M0QZC1 329 aaPredicted RBP9.75□□□□□ -0.85
RTN4-206ENST00000394611 IRS4O14654 1257 aaPredicted RBP9.75□□□□□ -0.85
RTN4-206ENST00000394611 RPS6KA4O75676 772 aa9.75□□□□□ -0.85
RTN4-206ENST00000394611 PRCPP42785 496 aa9.75□□□□□ -0.85
RTN4-206ENST00000394611 GFPT1Q06210 699 aaPredicted RBP9.75□□□□□ -0.85
RTN4-206ENST00000394611 RC3H1Q5TC82 1133 aaKnown RBP9.75□□□□□ -0.85
RTN4-206ENST00000394611 LUC7LQ9NQ29 371 aaKnown RBP9.75□□□□□ -0.85
RTN4-206ENST00000394611 AATFQ9NY61 560 aaKnown RBP eCLIP9.75□□□□□ -0.85
RTN4-206ENST00000394611 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.75□□□□□ -0.85
RTN4-206ENST00000394611 USP14P54578 494 aa9.75□□□□□ -0.85
RTN4-206ENST00000394611 NAPAP54920 295 aa9.75□□□□□ -0.85
RTN4-206ENST00000394611 EXOSC10Q01780 885 aaKnown RBP9.75□□□□□ -0.85
RTN4-206ENST00000394611 RDH13Q8NBN7 331 aa9.75□□□□□ -0.85
RTN4-206ENST00000394611 KIFC2Q96AC6 838 aa9.75□□□□□ -0.85
RTN4-206ENST00000394611 AKT1S1Q96B36 256 aa9.75□□□□□ -0.85
RTN4-206ENST00000394611 RSRC1Q96IZ7 334 aaKnown RBP9.75□□□□□ -0.85
RTN4-206ENST00000394611 CNOT6LQ96LI5 555 aaKnown RBP9.75□□□□□ -0.85
RTN4-206ENST00000394611 BMP2KQ9NSY1 1161 aaPredicted RBP9.75□□□□□ -0.85
RTN4-206ENST00000394611 SRP68Q9UHB9 627 aaKnown RBP9.75□□□□□ -0.85
RTN4-206ENST00000394611 TPX2Q9ULW0 747 aaKnown RBP9.75□□□□□ -0.85
RTN4-206ENST00000394611 PHF20L1A8MW92 1017 aa9.75□□□□□ -0.85
RTN4-206ENST00000394611 MCAMP43121 646 aa9.75□□□□□ -0.85
RTN4-206ENST00000394611 CARSP49589 748 aaKnown RBP9.75□□□□□ -0.85
RTN4-206ENST00000394611 POLR2FP61218 127 aaKnown RBP9.75□□□□□ -0.85
RTN4-206ENST00000394611 LRRC14Q15048 493 aa9.75□□□□□ -0.85
RTN4-206ENST00000394611 KIAA0753Q2KHM9 967 aa9.75□□□□□ -0.85
RTN4-206ENST00000394611 RSRC2Q7L4I2 434 aaKnown RBP9.75□□□□□ -0.85
RTN4-206ENST00000394611 ARHGEF1Q92888 912 aaKnown RBP9.75□□□□□ -0.85
RTN4-206ENST00000394611 MCM9Q9NXL9 1143 aa9.75□□□□□ -0.85
RTN4-206ENST00000394611 HPS5Q9UPZ3 1129 aa9.75□□□□□ -0.85
RTN4-206ENST00000394611 CACNA1FO60840 1977 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms