RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 GLI1P08151 1106 aa18.23■□□□□ 0.51
EFEMP1-202ENST00000394555 CALM1P0DP23 149 aa18.23■□□□□ 0.51
EFEMP1-202ENST00000394555 CALM2P0DP24 149 aa18.23■□□□□ 0.51
EFEMP1-202ENST00000394555 CALM3P0DP25 149 aa18.23■□□□□ 0.51
EFEMP1-202ENST00000394555 TCP1P17987 556 aaKnown RBP18.23■□□□□ 0.51
EFEMP1-202ENST00000394555 LSP1P33241 339 aa18.23■□□□□ 0.51
EFEMP1-202ENST00000394555 SKOR1P84550 965 aa18.23■□□□□ 0.51
EFEMP1-202ENST00000394555 GUCY2DQ02846 1103 aa18.23■□□□□ 0.51
EFEMP1-202ENST00000394555 CNPY4Q8N129 248 aa18.23■□□□□ 0.51
EFEMP1-202ENST00000394555 C4orf32Q8N8J7 132 aa18.23■□□□□ 0.51
EFEMP1-202ENST00000394555 RHOBTB3O94955 611 aa18.23■□□□□ 0.51
EFEMP1-202ENST00000394555 MAGEA1P43355 309 aa18.23■□□□□ 0.51
EFEMP1-202ENST00000394555 ASIC1P78348 528 aa18.23■□□□□ 0.51
EFEMP1-202ENST00000394555 RASSF7Q02833 373 aa18.23■□□□□ 0.51
EFEMP1-202ENST00000394555 MIIPQ5JXC2 388 aa18.23■□□□□ 0.51
EFEMP1-202ENST00000394555 ARL6IP4Q66PJ3 421 aaKnown RBP18.23■□□□□ 0.51
EFEMP1-202ENST00000394555 RRAGAQ7L523 313 aa18.23■□□□□ 0.51
EFEMP1-202ENST00000394555 PRPF38AQ8NAV1 312 aaKnown RBP18.23■□□□□ 0.51
EFEMP1-202ENST00000394555 LRRC15Q8TF66 581 aa18.23■□□□□ 0.51
EFEMP1-202ENST00000394555 CABS1Q96KC9 395 aa18.23■□□□□ 0.51
EFEMP1-202ENST00000394555 EPB41P11171 864 aaKnown RBP18.22■□□□□ 0.51
EFEMP1-202ENST00000394555 ATF3P18847 181 aa18.22■□□□□ 0.51
EFEMP1-202ENST00000394555 KCNB1Q14721 858 aa18.22■□□□□ 0.51
EFEMP1-202ENST00000394555 TMC4Q7Z404 712 aa18.22■□□□□ 0.51
EFEMP1-202ENST00000394555 BLIDQ8IZY5 108 aa18.22■□□□□ 0.51
EFEMP1-202ENST00000394555 PRDM11Q9NQV5 511 aa18.22■□□□□ 0.51
EFEMP1-202ENST00000394555 CCDC194A0A1B0GVG4 234 aa18.22■□□□□ 0.51
EFEMP1-202ENST00000394555 USP17L12C9JPN9 530 aa18.22■□□□□ 0.51
EFEMP1-202ENST00000394555 USP17L21D6R901 530 aa18.22■□□□□ 0.51
EFEMP1-202ENST00000394555 INF2Q27J81 1249 aa18.22■□□□□ 0.51
EFEMP1-202ENST00000394555 DHTKD1Q96HY7 919 aaPredicted RBP18.22■□□□□ 0.51
EFEMP1-202ENST00000394555 ZNF233A6NK53 670 aa18.21■□□□□ 0.51
EFEMP1-202ENST00000394555 CCNE1P24864 410 aa18.21■□□□□ 0.51
EFEMP1-202ENST00000394555 HPDP32754 393 aaPredicted RBP18.21■□□□□ 0.51
EFEMP1-202ENST00000394555 GFPT1Q06210 699 aaPredicted RBP18.21■□□□□ 0.51
EFEMP1-202ENST00000394555 PFKFB3Q16875 520 aaPredicted RBP18.21■□□□□ 0.51
EFEMP1-202ENST00000394555 NOC3LQ8WTT2 800 aaKnown RBP18.21■□□□□ 0.51
EFEMP1-202ENST00000394555 CD248Q9HCU0 757 aa18.21■□□□□ 0.51
EFEMP1-202ENST00000394555 HEXIM1O94992 359 aaKnown RBP18.21■□□□□ 0.51
EFEMP1-202ENST00000394555 NAA35Q5VZE5 725 aa18.21■□□□□ 0.51
EFEMP1-202ENST00000394555 DISP2A7MBM2 1401 aa18.21■□□□□ 0.51
EFEMP1-202ENST00000394555 TIAM2Q8IVF5 1701 aa18.21■□□□□ 0.51
EFEMP1-202ENST00000394555 IFT88Q13099 833 aa18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 TRADDQ15628 312 aa18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 MAATS1Q7Z4T9 603 aa18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 FAM114A1Q8IWE2 563 aa18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 IFT20Q8IY31 132 aa18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 PLAGL2Q9UPG8 496 aa18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 BICDL2A1A5D9 508 aa18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 DDAH1O94760 285 aa18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 IL2RBP14784 551 aa18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 FNTAP49354 379 aa18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 KCTD19Q17RG1 926 aaPredicted RBP18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 CAVIN3Q969G5 261 aa18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 MTMR8Q96EF0 704 aa18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 TLR10Q9BXR5 811 aa18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 SLC39A2Q9NP94 309 aa18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 KBTBD4Q9NVX7 518 aa18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 ANAPC4Q9UJX5 808 aa18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 WTIPA6NIX2 430 aaPredicted RBP18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 LRRC53A6NM62 1247 aa18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 PLCG1P19174 1290 aa18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 NR1D1P20393 614 aa18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 GSCP56915 257 aaPredicted RBP18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 PIGBQ92521 554 aa18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 CCDC47Q96A33 483 aaKnown RBP18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 EPN3Q9H201 632 aa18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 ZBTB1Q9Y2K1 713 aa18.2■□□□□ 0.5
EFEMP1-202ENST00000394555 PRLRP16471 622 aa18.19■□□□□ 0.5
EFEMP1-202ENST00000394555 GYG1P46976 350 aa18.19■□□□□ 0.5
EFEMP1-202ENST00000394555 CFAP221Q4G0U5 840 aa18.19■□□□□ 0.5
EFEMP1-202ENST00000394555 TDRD12Q587J7 1177 aaKnown RBP18.19■□□□□ 0.5
EFEMP1-202ENST00000394555 ZNF473Q8WTR7 871 aaKnown RBP18.19■□□□□ 0.5
EFEMP1-202ENST00000394555 PPANQ9NQ55 473 aaKnown RBP18.19■□□□□ 0.5
EFEMP1-202ENST00000394555 E7EVH7 732 aa18.19■□□□□ 0.5
EFEMP1-202ENST00000394555 ATP6V1AP38606 617 aa18.19■□□□□ 0.5
EFEMP1-202ENST00000394555 HDLBPQ00341 1268 aaKnown RBP18.19■□□□□ 0.5
EFEMP1-202ENST00000394555 ITIH3Q06033 890 aa18.19■□□□□ 0.5
EFEMP1-202ENST00000394555 ERGIC2Q96RQ1 377 aa18.19■□□□□ 0.5
EFEMP1-202ENST00000394555 KRT12Q99456 494 aa18.19■□□□□ 0.5
EFEMP1-202ENST00000394555 SLC1A4P43007 532 aa18.18■□□□□ 0.5
EFEMP1-202ENST00000394555 MICALCLQ6ZW33 695 aa18.18■□□□□ 0.5
EFEMP1-202ENST00000394555 CCT8L2Q96SF2 557 aa18.18■□□□□ 0.5
EFEMP1-202ENST00000394555 FTCDO95954 541 aa18.18■□□□□ 0.5
EFEMP1-202ENST00000394555 CALML3P27482 149 aa18.18■□□□□ 0.5
EFEMP1-202ENST00000394555 CDK17Q00537 523 aa18.18■□□□□ 0.5
EFEMP1-202ENST00000394555 ENOX2Q16206 610 aaKnown RBP18.18■□□□□ 0.5
EFEMP1-202ENST00000394555 ZNF572Q7Z3I7 529 aaPredicted RBP18.18■□□□□ 0.5
EFEMP1-202ENST00000394555 IQCKQ8N0W5 287 aa18.18■□□□□ 0.5
EFEMP1-202ENST00000394555 PACSIN2Q9UNF0 486 aaPredicted RBP18.18■□□□□ 0.5
EFEMP1-202ENST00000394555 A6NNZ2 444 aa18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 PPP1R37O75864 691 aa18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 NKX1-1Q15270 411 aaPredicted RBP18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 TUBB8Q3ZCM7 444 aa18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 KDM7AQ6ZMT4 941 aa18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 CCDC155Q8N6L0 562 aa18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 NOX5Q96PH1 765 aa18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 RIOK1Q9BRS2 568 aaKnown RBP18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 TANGO6Q9C0B7 1094 aa18.17■□□□□ 0.5
EFEMP1-202ENST00000394555 NDST4Q9H3R1 872 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms