RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 CTCFLQ8NI51 663 aaPredicted RBP9.94□□□□□ -0.82
APLF-202ENST00000394342 NUP133Q8WUM0 1156 aa9.94□□□□□ -0.82
APLF-202ENST00000394342 LZTS2Q9BRK4 669 aa9.94□□□□□ -0.82
APLF-202ENST00000394342 HTATIP2Q9BUP3 242 aa9.94□□□□□ -0.82
APLF-202ENST00000394342 AMNQ9BXJ7 453 aa9.94□□□□□ -0.82
APLF-202ENST00000394342 LRRC2Q9BYS8 371 aa9.94□□□□□ -0.82
APLF-202ENST00000394342 ABHD16BQ9H3Z7 469 aa9.94□□□□□ -0.82
APLF-202ENST00000394342 VAT1LQ9HCJ6 419 aa9.94□□□□□ -0.82
APLF-202ENST00000394342 GPHNQ9NQX3 736 aaPredicted RBP9.94□□□□□ -0.82
APLF-202ENST00000394342 TSHZ2Q9NRE2 1034 aa9.94□□□□□ -0.82
APLF-202ENST00000394342 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.94□□□□□ -0.82
APLF-202ENST00000394342 ADD3Q9UEY8 706 aaKnown RBP9.94□□□□□ -0.82
APLF-202ENST00000394342 MRPL11Q9Y3B7 192 aaKnown RBP9.94□□□□□ -0.82
APLF-202ENST00000394342 PTPDC1A2A3K4 754 aa9.93□□□□□ -0.82
APLF-202ENST00000394342 RIOK3O14730 519 aaKnown RBP9.93□□□□□ -0.82
APLF-202ENST00000394342 ZBTB5O15062 677 aa9.93□□□□□ -0.82
APLF-202ENST00000394342 EIF5BO60841 1220 aaKnown RBP9.93□□□□□ -0.82
APLF-202ENST00000394342 SNAI1O95863 264 aaPredicted RBP9.93□□□□□ -0.82
APLF-202ENST00000394342 RARBP10826 455 aa9.93□□□□□ -0.82
APLF-202ENST00000394342 AKR1A1P14550 325 aa9.93□□□□□ -0.82
APLF-202ENST00000394342 MNX1P50219 401 aaPredicted RBP9.93□□□□□ -0.82
APLF-202ENST00000394342 RPS6P62753 249 aaKnown RBP9.93□□□□□ -0.82
APLF-202ENST00000394342 ACVR2BQ13705 512 aa9.93□□□□□ -0.82
APLF-202ENST00000394342 MCF2L2Q86YR7 1114 aa9.93□□□□□ -0.82
APLF-202ENST00000394342 CCDC144CPQ8IYA2 1237 aa9.93□□□□□ -0.82
APLF-202ENST00000394342 MORC4Q8TE76 937 aa9.93□□□□□ -0.82
APLF-202ENST00000394342 PAWRQ96IZ0 340 aaKnown RBP9.93□□□□□ -0.82
APLF-202ENST00000394342 SPZ1Q9BXG8 430 aa9.93□□□□□ -0.82
APLF-202ENST00000394342 USP26Q9BXU7 913 aa9.93□□□□□ -0.82
APLF-202ENST00000394342 SNX14Q9Y5W7 946 aa9.93□□□□□ -0.82
APLF-202ENST00000394342 SLC12A7Q9Y666 1083 aa9.93□□□□□ -0.82
APLF-202ENST00000394342 LTBP2Q14767 1821 aa9.93□□□□□ -0.82
APLF-202ENST00000394342 ASTN1O14525 1302 aa9.92□□□□□ -0.82
APLF-202ENST00000394342 PNMA6FA0A0J9YX94 578 aa9.92□□□□□ -0.82
APLF-202ENST00000394342 DNM1LO00429 736 aa9.92□□□□□ -0.82
APLF-202ENST00000394342 CYTH3O43739 400 aa9.92□□□□□ -0.82
APLF-202ENST00000394342 CALML3P27482 149 aa9.92□□□□□ -0.82
APLF-202ENST00000394342 PSMA5P28066 241 aa9.92□□□□□ -0.82
APLF-202ENST00000394342 ALDH5A1P51649 535 aaPredicted RBP9.92□□□□□ -0.82
APLF-202ENST00000394342 RCAN1P53805 252 aa9.92□□□□□ -0.82
APLF-202ENST00000394342 GHRHRQ02643 423 aa9.92□□□□□ -0.82
APLF-202ENST00000394342 SLC35G1Q2M3R5 365 aa9.92□□□□□ -0.82
APLF-202ENST00000394342 BLOC1S2Q6QNY1 142 aa9.92□□□□□ -0.82
APLF-202ENST00000394342 SLC30A10Q6XR72 485 aa9.92□□□□□ -0.82
APLF-202ENST00000394342 SYNE3Q6ZMZ3 975 aa9.92□□□□□ -0.82
APLF-202ENST00000394342 ARRDC4Q8NCT1 418 aa9.92□□□□□ -0.82
APLF-202ENST00000394342 DNERQ8NFT8 737 aa9.92□□□□□ -0.82
APLF-202ENST00000394342 DIS3LQ8TF46 1054 aaKnown RBP9.92□□□□□ -0.82
APLF-202ENST00000394342 JAKMIP1Q96N16 626 aaKnown RBP9.92□□□□□ -0.82
APLF-202ENST00000394342 PIGSQ96S52 555 aa9.92□□□□□ -0.82
APLF-202ENST00000394342 MPHOSPH6Q99547 160 aaKnown RBP9.92□□□□□ -0.82
APLF-202ENST00000394342 MYL10Q9BUA6 226 aa9.92□□□□□ -0.82
APLF-202ENST00000394342 KATNBL1Q9H079 304 aa9.92□□□□□ -0.82
APLF-202ENST00000394342 C11orf49Q9H6J7 331 aa9.92□□□□□ -0.82
APLF-202ENST00000394342 ZHX1Q9UKY1 873 aaPredicted RBP9.92□□□□□ -0.82
APLF-202ENST00000394342 FAM184BQ9ULE4 1060 aa9.92□□□□□ -0.82
APLF-202ENST00000394342 B4DLN1 442 aa9.91□□□□□ -0.82
APLF-202ENST00000394342 KBTBD13C9JR72 458 aa9.91□□□□□ -0.82
APLF-202ENST00000394342 PPP1R11O60927 126 aaPredicted RBP9.91□□□□□ -0.82
APLF-202ENST00000394342 DUSP11O75319 330 aaKnown RBP9.91□□□□□ -0.82
APLF-202ENST00000394342 COL6A1P12109 1028 aa9.91□□□□□ -0.82
APLF-202ENST00000394342 MRPL12P52815 198 aaKnown RBP9.91□□□□□ -0.82
APLF-202ENST00000394342 CCDC144BQ3MJ40 725 aa9.91□□□□□ -0.82
APLF-202ENST00000394342 ANO1Q5XXA6 986 aa9.91□□□□□ -0.82
APLF-202ENST00000394342 APOA5Q6Q788 366 aa9.91□□□□□ -0.82
APLF-202ENST00000394342 MICU3Q86XE3 530 aa9.91□□□□□ -0.82
APLF-202ENST00000394342 HOMER1Q86YM7 354 aa9.91□□□□□ -0.82
APLF-202ENST00000394342 FBXL16Q8N461 479 aa9.91□□□□□ -0.82
APLF-202ENST00000394342 SAMD3Q8N6K7 520 aa9.91□□□□□ -0.82
APLF-202ENST00000394342 FANCBQ8NB91 859 aa9.91□□□□□ -0.82
APLF-202ENST00000394342 RRP36Q96EU6 259 aaKnown RBP9.91□□□□□ -0.82
APLF-202ENST00000394342 TCEANC2Q96MN5 208 aa9.91□□□□□ -0.82
APLF-202ENST00000394342 VTA1Q9NP79 307 aa9.91□□□□□ -0.82
APLF-202ENST00000394342 RBM28Q9NW13 759 aaKnown RBP9.91□□□□□ -0.82
APLF-202ENST00000394342 MAP3K20Q9NYL2 800 aaKnown RBP9.91□□□□□ -0.82
APLF-202ENST00000394342 PCDHA1Q9Y5I3 950 aa9.91□□□□□ -0.82
APLF-202ENST00000394342 ZBTB43O43298 467 aa9.9□□□□□ -0.82
APLF-202ENST00000394342 PLEKHA8P1O95397 391 aa9.9□□□□□ -0.82
APLF-202ENST00000394342 CD44P16070 742 aaKnown RBP9.9□□□□□ -0.82
APLF-202ENST00000394342 RXRAP19793 462 aa9.9□□□□□ -0.82
APLF-202ENST00000394342 CASTP20810 708 aaKnown RBP9.9□□□□□ -0.82
APLF-202ENST00000394342 RPS6KB1P23443 525 aa9.9□□□□□ -0.82
APLF-202ENST00000394342 EDNRBP24530 442 aa9.9□□□□□ -0.82
APLF-202ENST00000394342 HSD17B4P51659 736 aa9.9□□□□□ -0.82
APLF-202ENST00000394342 FGD1P98174 961 aa9.9□□□□□ -0.82
APLF-202ENST00000394342 LRRC41Q15345 812 aa9.9□□□□□ -0.82
APLF-202ENST00000394342 PRPF38BQ5VTL8 546 aaKnown RBP9.9□□□□□ -0.82
APLF-202ENST00000394342 Q6ZUG5 572 aa9.9□□□□□ -0.82
APLF-202ENST00000394342 TMTC3Q6ZXV5 915 aa9.9□□□□□ -0.82
APLF-202ENST00000394342 RNF180Q86T96 592 aa9.9□□□□□ -0.82
APLF-202ENST00000394342 SRBD1Q8N5C6 995 aaKnown RBP9.9□□□□□ -0.82
APLF-202ENST00000394342 SYTL5Q8TDW5 730 aaPredicted RBP9.9□□□□□ -0.82
APLF-202ENST00000394342 DPF3Q92784 378 aa9.9□□□□□ -0.82
APLF-202ENST00000394342 RNF25Q96BH1 459 aaPredicted RBP9.9□□□□□ -0.82
APLF-202ENST00000394342 PURBQ96QR8 312 aaKnown RBP9.9□□□□□ -0.82
APLF-202ENST00000394342 AGXT2Q9BYV1 514 aa9.9□□□□□ -0.82
APLF-202ENST00000394342 TM6SF1Q9BZW5 370 aa9.9□□□□□ -0.82
APLF-202ENST00000394342 XPNPEP3Q9NQH7 507 aa9.9□□□□□ -0.82
APLF-202ENST00000394342 SEC63Q9UGP8 760 aaKnown RBP9.9□□□□□ -0.82
APLF-202ENST00000394342 MYO9BQ13459 2157 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms