RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 MINDY4BA8MYZ0 360 aa20.91■□□□□ 0.94
HOXC6-202ENST00000394331 RNF225M0QZC1 329 aaPredicted RBP20.91■□□□□ 0.94
HOXC6-202ENST00000394331 XBP1P17861 261 aa20.91■□□□□ 0.94
HOXC6-202ENST00000394331 KRT31Q15323 416 aa20.91■□□□□ 0.94
HOXC6-202ENST00000394331 CREG2Q8IUH2 290 aa20.91■□□□□ 0.94
HOXC6-202ENST00000394331 ARFGAP2Q8N6H7 521 aa20.91■□□□□ 0.94
HOXC6-202ENST00000394331 OR8K1Q8NGG5 319 aa20.91■□□□□ 0.94
HOXC6-202ENST00000394331 RASSF8Q8NHQ8 419 aa20.91■□□□□ 0.94
HOXC6-202ENST00000394331 FAM210AQ96ND0 272 aa20.91■□□□□ 0.94
HOXC6-202ENST00000394331 SPATA31A1Q5TZJ5 1347 aa20.91■□□□□ 0.94
HOXC6-202ENST00000394331 UBE4AQ14139 1066 aa20.91■□□□□ 0.94
HOXC6-202ENST00000394331 CCDC82Q8N4S0 544 aa20.91■□□□□ 0.94
HOXC6-202ENST00000394331 GSDMAQ96QA5 445 aa20.91■□□□□ 0.94
HOXC6-202ENST00000394331 CHP1Q99653 195 aa20.91■□□□□ 0.94
HOXC6-202ENST00000394331 CD44P16070 742 aaKnown RBP20.91■□□□□ 0.94
HOXC6-202ENST00000394331 CLEC4GQ6UXB4 293 aa20.91■□□□□ 0.94
HOXC6-202ENST00000394331 SCLT1Q96NL6 688 aa20.91■□□□□ 0.94
HOXC6-202ENST00000394331 DMGDHQ9UI17 866 aaKnown RBP20.91■□□□□ 0.94
HOXC6-202ENST00000394331 SNX12Q9UMY4 172 aa20.91■□□□□ 0.94
HOXC6-202ENST00000394331 CHD4Q14839 1912 aa20.9■□□□□ 0.94
HOXC6-202ENST00000394331 N4BP3O15049 544 aa20.9■□□□□ 0.94
HOXC6-202ENST00000394331 SEC23AQ15436 765 aa20.9■□□□□ 0.94
HOXC6-202ENST00000394331 SH3RF1Q7Z6J0 888 aa20.9■□□□□ 0.94
HOXC6-202ENST00000394331 SH2D3CQ8N5H7 860 aa20.9■□□□□ 0.94
HOXC6-202ENST00000394331 ATP6V1G3Q96LB4 118 aa20.9■□□□□ 0.94
HOXC6-202ENST00000394331 LRRC1Q9BTT6 524 aa20.9■□□□□ 0.94
HOXC6-202ENST00000394331 OSBPL7Q9BZF2 842 aa20.9■□□□□ 0.94
HOXC6-202ENST00000394331 SRPRBQ9Y5M8 271 aaKnown RBP20.9■□□□□ 0.94
HOXC6-202ENST00000394331 C5orf60A6NFR6 353 aa20.9■□□□□ 0.94
HOXC6-202ENST00000394331 PPP1R3GB7ZBB8 358 aa20.9■□□□□ 0.94
HOXC6-202ENST00000394331 TNKSO95271 1327 aa20.9■□□□□ 0.94
HOXC6-202ENST00000394331 COPB1P53618 953 aaKnown RBP20.9■□□□□ 0.94
HOXC6-202ENST00000394331 COL16A1Q07092 1604 aaPredicted RBP20.9■□□□□ 0.94
HOXC6-202ENST00000394331 RBBP5Q15291 538 aaKnown RBP20.9■□□□□ 0.94
HOXC6-202ENST00000394331 CCHCR1Q8TD31 782 aa20.9■□□□□ 0.94
HOXC6-202ENST00000394331 SDR42E1Q8WUS8 393 aa20.9■□□□□ 0.94
HOXC6-202ENST00000394331 CCDC47Q96A33 483 aaKnown RBP20.9■□□□□ 0.94
HOXC6-202ENST00000394331 LIN7AO14910 233 aaPredicted RBP20.89■□□□□ 0.94
HOXC6-202ENST00000394331 MEA1Q16626 185 aa20.89■□□□□ 0.94
HOXC6-202ENST00000394331 CAVIN4Q5BKX8 364 aa20.89■□□□□ 0.94
HOXC6-202ENST00000394331 SAAL1Q96ER3 474 aa20.89■□□□□ 0.94
HOXC6-202ENST00000394331 HAUS2Q9NVX0 235 aa20.89■□□□□ 0.94
HOXC6-202ENST00000394331 BCORQ6W2J9 1755 aa20.89■□□□□ 0.93
HOXC6-202ENST00000394331 ZNF233A6NK53 670 aa20.89■□□□□ 0.93
HOXC6-202ENST00000394331 DNM1LO00429 736 aa20.89■□□□□ 0.93
HOXC6-202ENST00000394331 PES1O00541 588 aaKnown RBP20.89■□□□□ 0.93
HOXC6-202ENST00000394331 ECM2O94769 699 aaPredicted RBP20.89■□□□□ 0.93
HOXC6-202ENST00000394331 PCP11498 1178 aaKnown RBP20.89■□□□□ 0.93
HOXC6-202ENST00000394331 ITGB3BPQ13352 177 aaPredicted RBP20.89■□□□□ 0.93
HOXC6-202ENST00000394331 RIPK1Q13546 671 aa20.89■□□□□ 0.93
HOXC6-202ENST00000394331 CFAP58Q5T655 872 aa20.89■□□□□ 0.93
HOXC6-202ENST00000394331 ADGRA1Q86SQ6 560 aa20.89■□□□□ 0.93
HOXC6-202ENST00000394331 IDEP14735 1019 aa20.88■□□□□ 0.93
HOXC6-202ENST00000394331 TRAF1Q13077 416 aa20.88■□□□□ 0.93
HOXC6-202ENST00000394331 NR5A1Q13285 461 aa20.88■□□□□ 0.93
HOXC6-202ENST00000394331 SF3B3Q15393 1217 aaKnown RBP20.88■□□□□ 0.93
HOXC6-202ENST00000394331 MARCH10Q8NA82 808 aaPredicted RBP20.88■□□□□ 0.93
HOXC6-202ENST00000394331 SPATA4Q8NEY3 305 aa20.88■□□□□ 0.93
HOXC6-202ENST00000394331 LMBR1Q8WVP7 490 aa20.88■□□□□ 0.93
HOXC6-202ENST00000394331 RIOK1Q9BRS2 568 aaKnown RBP20.88■□□□□ 0.93
HOXC6-202ENST00000394331 TSGA10Q9BZW7 698 aa20.88■□□□□ 0.93
HOXC6-202ENST00000394331 PCDHB6Q9Y5E3 794 aa20.88■□□□□ 0.93
HOXC6-202ENST00000394331 COL22A1Q8NFW1 1626 aaPredicted RBP20.88■□□□□ 0.93
HOXC6-202ENST00000394331 WNK3Q9BYP7 1800 aa20.88■□□□□ 0.93
HOXC6-202ENST00000394331 ZNF185O15231 689 aa20.88■□□□□ 0.93
HOXC6-202ENST00000394331 GYG1P46976 350 aa20.88■□□□□ 0.93
HOXC6-202ENST00000394331 SCTRP47872 440 aa20.88■□□□□ 0.93
HOXC6-202ENST00000394331 VAV2P52735 878 aa20.88■□□□□ 0.93
HOXC6-202ENST00000394331 CMTR1Q8N1G2 835 aaKnown RBP20.88■□□□□ 0.93
HOXC6-202ENST00000394331 HDAC7Q8WUI4 952 aa20.88■□□□□ 0.93
HOXC6-202ENST00000394331 BRIP1Q9BX63 1249 aa20.88■□□□□ 0.93
HOXC6-202ENST00000394331 A0A1W2PQC6 194 aa20.88■□□□□ 0.93
HOXC6-202ENST00000394331 SNUPNO95149 360 aaKnown RBP20.88■□□□□ 0.93
HOXC6-202ENST00000394331 HAUS3Q68CZ6 603 aa20.88■□□□□ 0.93
HOXC6-202ENST00000394331 GRAMD1CQ8IYS0 662 aa20.88■□□□□ 0.93
HOXC6-202ENST00000394331 CCDC170Q8IYT3 715 aa20.88■□□□□ 0.93
HOXC6-202ENST00000394331 ZSCAN10Q96SZ4 725 aaPredicted RBP20.88■□□□□ 0.93
HOXC6-202ENST00000394331 KDM4CQ9H3R0 1056 aa20.88■□□□□ 0.93
HOXC6-202ENST00000394331 RREB1Q92766 1687 aa20.87■□□□□ 0.93
HOXC6-202ENST00000394331 E7EVH7 732 aa20.87■□□□□ 0.93
HOXC6-202ENST00000394331 CYLC1P35663 651 aaPredicted RBP20.87■□□□□ 0.93
HOXC6-202ENST00000394331 MICAL1Q8TDZ2 1067 aa20.87■□□□□ 0.93
HOXC6-202ENST00000394331 ATP6V1G2O95670 118 aa20.87■□□□□ 0.93
HOXC6-202ENST00000394331 KRT14P02533 472 aa20.87■□□□□ 0.93
HOXC6-202ENST00000394331 SEC24CP53992 1094 aa20.87■□□□□ 0.93
HOXC6-202ENST00000394331 E2F5Q15329 346 aa20.87■□□□□ 0.93
HOXC6-202ENST00000394331 CATIPQ7Z7H3 387 aa20.87■□□□□ 0.93
HOXC6-202ENST00000394331 SPDL1Q96EA4 605 aa20.87■□□□□ 0.93
HOXC6-202ENST00000394331 CALR3Q96L12 384 aaKnown RBP20.87■□□□□ 0.93
HOXC6-202ENST00000394331 CABP5Q9NP86 173 aa20.87■□□□□ 0.93
HOXC6-202ENST00000394331 KDM4FA0A1W2PPD8 638 aa20.86■□□□□ 0.93
HOXC6-202ENST00000394331 GMNCA6NCL1 334 aa20.86■□□□□ 0.93
HOXC6-202ENST00000394331 CALM1P0DP23 149 aa20.86■□□□□ 0.93
HOXC6-202ENST00000394331 CALM2P0DP24 149 aa20.86■□□□□ 0.93
HOXC6-202ENST00000394331 CALM3P0DP25 149 aa20.86■□□□□ 0.93
HOXC6-202ENST00000394331 PRPHP41219 470 aa20.86■□□□□ 0.93
HOXC6-202ENST00000394331 KCTD16Q68DU8 428 aa20.86■□□□□ 0.93
HOXC6-202ENST00000394331 TRIM58Q8NG06 486 aa20.86■□□□□ 0.93
HOXC6-202ENST00000394331 CUL5Q93034 780 aa20.86■□□□□ 0.93
HOXC6-202ENST00000394331 JADE2Q9NQC1 790 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms