RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 NEMFO60524 1076 aa23.07■■□□□ 1.28
HDDC3-202ENST00000394272 PRPHP41219 470 aa23.07■■□□□ 1.28
HDDC3-202ENST00000394272 LDLRAD1Q5T700 205 aa23.07■■□□□ 1.28
HDDC3-202ENST00000394272 PPP4R3AQ6IN85 833 aa23.07■■□□□ 1.28
HDDC3-202ENST00000394272 ATG4CQ96DT6 458 aa23.07■■□□□ 1.28
HDDC3-202ENST00000394272 FAM13BQ9NYF5 915 aa23.07■■□□□ 1.28
HDDC3-202ENST00000394272 KCNH3Q9ULD8 1083 aa23.07■■□□□ 1.28
HDDC3-202ENST00000394272 GOLGA6L3A6NEY3 463 aa23.07■■□□□ 1.28
HDDC3-202ENST00000394272 VWA5AO00534 786 aa23.07■■□□□ 1.28
HDDC3-202ENST00000394272 CTAGE5O15320 804 aa23.07■■□□□ 1.28
HDDC3-202ENST00000394272 DSG3P32926 999 aa23.07■■□□□ 1.28
HDDC3-202ENST00000394272 USP49Q70CQ1 688 aa23.07■■□□□ 1.28
HDDC3-202ENST00000394272 OTUD5Q96G74 571 aa23.07■■□□□ 1.28
HDDC3-202ENST00000394272 TIGD1Q96MW7 591 aa23.07■■□□□ 1.28
HDDC3-202ENST00000394272 FUCA2Q9BTY2 467 aa23.07■■□□□ 1.28
HDDC3-202ENST00000394272 ZBED4O75132 1171 aa23.06■■□□□ 1.28
HDDC3-202ENST00000394272 TDP2O95551 362 aa23.06■■□□□ 1.28
HDDC3-202ENST00000394272 COG2Q14746 738 aa23.06■■□□□ 1.28
HDDC3-202ENST00000394272 REPS2Q8NFH8 660 aa23.06■■□□□ 1.28
HDDC3-202ENST00000394272 TBC1D5Q92609 795 aa23.06■■□□□ 1.28
HDDC3-202ENST00000394272 WNK4Q96J92 1243 aa23.06■■□□□ 1.28
HDDC3-202ENST00000394272 RAVER2Q9HCJ3 691 aaKnown RBP23.06■■□□□ 1.28
HDDC3-202ENST00000394272 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.06■■□□□ 1.28
HDDC3-202ENST00000394272 A0A0G2JLL6 359 aaPredicted RBP23.05■■□□□ 1.28
HDDC3-202ENST00000394272 SPDYE3A6NKU9 549 aa23.05■■□□□ 1.28
HDDC3-202ENST00000394272 CXCL11O14625 94 aa23.05■■□□□ 1.28
HDDC3-202ENST00000394272 OR52Z1P0C646 297 aa23.05■■□□□ 1.28
HDDC3-202ENST00000394272 HOXA13P31271 388 aaPredicted RBP23.05■■□□□ 1.28
HDDC3-202ENST00000394272 USP11P51784 963 aa23.05■■□□□ 1.28
HDDC3-202ENST00000394272 FMR1Q06787 632 aaKnown RBP eCLIP23.05■■□□□ 1.28
HDDC3-202ENST00000394272 PRRT2Q7Z6L0 340 aaPredicted RBP23.05■■□□□ 1.28
HDDC3-202ENST00000394272 POTEDQ86YR6 584 aa23.05■■□□□ 1.28
HDDC3-202ENST00000394272 PNMA2Q9UL42 364 aa23.05■■□□□ 1.28
HDDC3-202ENST00000394272 KCNH4Q9UQ05 1017 aa23.05■■□□□ 1.28
HDDC3-202ENST00000394272 RBBP6Q7Z6E9 1792 aaKnown RBP23.05■■□□□ 1.28
HDDC3-202ENST00000394272 MYPNQ86TC9 1320 aa23.05■■□□□ 1.28
HDDC3-202ENST00000394272 GCOM1H8Y6P7 765 aaPredicted RBP23.05■■□□□ 1.28
HDDC3-202ENST00000394272 SLC37A4O43826 429 aa23.05■■□□□ 1.28
HDDC3-202ENST00000394272 CFBP00751 764 aa23.05■■□□□ 1.28
HDDC3-202ENST00000394272 POLR2MP0CAP2 368 aa23.05■■□□□ 1.28
HDDC3-202ENST00000394272 LONP1P36776 959 aaKnown RBP23.05■■□□□ 1.28
HDDC3-202ENST00000394272 SREBF1P36956 1147 aa23.05■■□□□ 1.28
HDDC3-202ENST00000394272 PPIL2Q13356 520 aa23.05■■□□□ 1.28
HDDC3-202ENST00000394272 DTHD1Q6ZMT9 781 aa23.05■■□□□ 1.28
HDDC3-202ENST00000394272 CKAP2LQ8IYA6 745 aa23.05■■□□□ 1.28
HDDC3-202ENST00000394272 CPXCR1Q8N123 301 aa23.05■■□□□ 1.28
HDDC3-202ENST00000394272 SYMPKQ92797 1274 aaKnown RBP23.05■■□□□ 1.28
HDDC3-202ENST00000394272 EPSTI1Q96J88 318 aa23.05■■□□□ 1.28
HDDC3-202ENST00000394272 MTMR9Q96QG7 549 aa23.05■■□□□ 1.28
HDDC3-202ENST00000394272 UNCXA6NJT0 531 aa23.04■■□□□ 1.28
HDDC3-202ENST00000394272 GCFC2P16383 781 aaKnown RBP23.04■■□□□ 1.28
HDDC3-202ENST00000394272 GHRHRQ02643 423 aa23.04■■□□□ 1.28
HDDC3-202ENST00000394272 CLEC4DQ8WXI8 215 aa23.04■■□□□ 1.28
HDDC3-202ENST00000394272 NAP1L4Q99733 375 aaKnown RBP23.04■■□□□ 1.28
HDDC3-202ENST00000394272 CYP3A7-CYP3A51PA0A087WV96 503 aa23.03■■□□□ 1.28
HDDC3-202ENST00000394272 CYP3A7P24462 503 aa23.03■■□□□ 1.28
HDDC3-202ENST00000394272 TREML2Q5T2D2 321 aa23.03■■□□□ 1.28
HDDC3-202ENST00000394272 MOXD1Q6UVY6 613 aa23.03■■□□□ 1.28
HDDC3-202ENST00000394272 PROCA1Q8NCQ7 364 aaPredicted RBP23.03■■□□□ 1.28
HDDC3-202ENST00000394272 NMRK2Q9NPI5 230 aa23.03■■□□□ 1.28
HDDC3-202ENST00000394272 OAZ1P54368 228 aa23.02■■□□□ 1.28
HDDC3-202ENST00000394272 ARHGAP4P98171 946 aa23.02■■□□□ 1.28
HDDC3-202ENST00000394272 OPTNQ96CV9 577 aa23.02■■□□□ 1.28
HDDC3-202ENST00000394272 MBOAT7Q96N66 472 aa23.02■■□□□ 1.28
HDDC3-202ENST00000394272 SDF4Q9BRK5 362 aa23.02■■□□□ 1.28
HDDC3-202ENST00000394272 TSPY26PQ9H489 355 aa23.02■■□□□ 1.28
HDDC3-202ENST00000394272 DCAF8L1A6NGE4 600 aa23.02■■□□□ 1.28
HDDC3-202ENST00000394272 SPDYE16A6NNV3 312 aaPredicted RBP23.02■■□□□ 1.28
HDDC3-202ENST00000394272 HSD17B4P51659 736 aa23.02■■□□□ 1.28
HDDC3-202ENST00000394272 LONRF3Q496Y0 759 aa23.02■■□□□ 1.28
HDDC3-202ENST00000394272 HOXC10Q9NYD6 342 aa23.02■■□□□ 1.28
HDDC3-202ENST00000394272 DDX25Q9UHL0 483 aaKnown RBP23.02■■□□□ 1.28
HDDC3-202ENST00000394272 ZNF214Q9UL59 606 aaPredicted RBP23.02■■□□□ 1.28
HDDC3-202ENST00000394272 CTDP1Q9Y5B0 961 aaPredicted RBP23.02■■□□□ 1.28
HDDC3-202ENST00000394272 NFIBO00712 420 aa23.01■■□□□ 1.27
HDDC3-202ENST00000394272 ATP2A1O14983 1001 aa23.01■■□□□ 1.27
HDDC3-202ENST00000394272 POLR2DO15514 142 aaKnown RBP23.01■■□□□ 1.27
HDDC3-202ENST00000394272 ALAS1P13196 640 aa23.01■■□□□ 1.27
HDDC3-202ENST00000394272 HOXA7P31268 230 aaPredicted RBP23.01■■□□□ 1.27
HDDC3-202ENST00000394272 CALCRLQ16602 461 aa23.01■■□□□ 1.27
HDDC3-202ENST00000394272 KRBA2Q6ZNG9 492 aa23.01■■□□□ 1.27
HDDC3-202ENST00000394272 ZNF408Q9H9D4 720 aa23.01■■□□□ 1.27
HDDC3-202ENST00000394272 A0A0G2JMZ2 1700 aa23.01■■□□□ 1.27
HDDC3-202ENST00000394272 A0A087X0B3 334 aa23■■□□□ 1.27
HDDC3-202ENST00000394272 FKBP1BP68106 108 aa23■■□□□ 1.27
HDDC3-202ENST00000394272 FCHSD1Q86WN1 690 aa23■■□□□ 1.27
HDDC3-202ENST00000394272 ELOA2Q8IYF1 753 aaPredicted RBP23■■□□□ 1.27
HDDC3-202ENST00000394272 CYP3A4P08684 503 aa23■■□□□ 1.27
HDDC3-202ENST00000394272 CIITAP33076 1130 aa23■■□□□ 1.27
HDDC3-202ENST00000394272 MUM1L1Q5H9M0 696 aa23■■□□□ 1.27
HDDC3-202ENST00000394272 MCF2L2Q86YR7 1114 aa23■■□□□ 1.27
HDDC3-202ENST00000394272 CCDC192P0DO97 292 aa22.99■■□□□ 1.27
HDDC3-202ENST00000394272 GJA5P36382 358 aa22.99■■□□□ 1.27
HDDC3-202ENST00000394272 MOGSQ13724 837 aa22.99■■□□□ 1.27
HDDC3-202ENST00000394272 TMEM132BQ14DG7 1078 aa22.99■■□□□ 1.27
HDDC3-202ENST00000394272 GADL1Q6ZQY3 521 aa22.99■■□□□ 1.27
HDDC3-202ENST00000394272 SAMD3Q8N6K7 520 aa22.99■■□□□ 1.27
HDDC3-202ENST00000394272 PDILTQ8N807 584 aa22.99■■□□□ 1.27
HDDC3-202ENST00000394272 CNNM3Q8NE01 707 aa22.99■■□□□ 1.27
HDDC3-202ENST00000394272 AK8Q96MA6 479 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms