RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 TTC26A0AVF1 554 aa20.93■□□□□ 0.94
SMARCC2-203ENST00000394023 CCNE1P24864 410 aa20.93■□□□□ 0.94
SMARCC2-203ENST00000394023 EHBP1Q8NDI1 1231 aa20.93■□□□□ 0.94
SMARCC2-203ENST00000394023 ALS2CR12Q96Q35 445 aa20.93■□□□□ 0.94
SMARCC2-203ENST00000394023 ADAMTS3O15072 1205 aa20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 TACC1O75410 805 aa20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 CRKP46108 304 aa20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 GPATCH4Q5T3I0 446 aaKnown RBP20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 SMAP1Q8IYB5 467 aaPredicted RBP20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 MB21D1Q8N884 522 aa20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 DHTKD1Q96HY7 919 aaPredicted RBP20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 ABHD10Q9NUJ1 306 aa20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 FAM237AA0A1B0GTK4 181 aa20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 EEF1GP26641 437 aaKnown RBP20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 PAFAH1B1P43034 410 aa20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 STK4Q13043 487 aa20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 MAEAQ7L5Y9 396 aa20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 MYOCDQ8IZQ8 938 aa20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 LRRN4CLQ8ND94 238 aa20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 TRERF1Q96PN7 1200 aa20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 CHP1Q99653 195 aa20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 SPZ1Q9BXG8 430 aa20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 GBP3Q9H0R5 595 aa20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 N4BP2Q86UW6 1770 aaPredicted RBP20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 PALM3A6NDB9 673 aaPredicted RBP20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 PDHBP11177 359 aa20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 NPR1P16066 1061 aa20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 TM4SF1P30408 202 aa20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 CT47A1Q5JQC4 288 aaPredicted RBP20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 PANK4Q9NVE7 773 aa20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 PNMA6FA0A0J9YX94 578 aa20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 SF3B2Q13435 895 aaKnown RBP20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 SEPT2Q15019 361 aa20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 ABCB5Q2M3G0 1257 aa20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 KIFC2Q96AC6 838 aa20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 TDRD3Q9H7E2 651 aaKnown RBP20.92■□□□□ 0.94
SMARCC2-203ENST00000394023 ZNF18P17022 549 aa20.91■□□□□ 0.94
SMARCC2-203ENST00000394023 HMGB2P26583 209 aaKnown RBP20.91■□□□□ 0.94
SMARCC2-203ENST00000394023 RNASE9P60153 205 aaKnown RBP20.91■□□□□ 0.94
SMARCC2-203ENST00000394023 REXO1L1PQ8IX06 675 aa20.91■□□□□ 0.94
SMARCC2-203ENST00000394023 ANKRD7Q92527 254 aa20.91■□□□□ 0.94
SMARCC2-203ENST00000394023 DDX39AO00148 427 aaKnown RBP20.91■□□□□ 0.94
SMARCC2-203ENST00000394023 HOXA13P31271 388 aaPredicted RBP20.91■□□□□ 0.94
SMARCC2-203ENST00000394023 PABPC4Q13310 644 aaKnown RBP eCLIP20.91■□□□□ 0.942e-7■□□□□ 9.7
SMARCC2-203ENST00000394023 FAM26FQ5R3K3 315 aa20.91■□□□□ 0.94
SMARCC2-203ENST00000394023 SYCP3Q8IZU3 236 aa20.91■□□□□ 0.94
SMARCC2-203ENST00000394023 SMCR8Q8TEV9 937 aaPredicted RBP20.91■□□□□ 0.94
SMARCC2-203ENST00000394023 NUP58Q9BVL2 599 aa20.91■□□□□ 0.94
SMARCC2-203ENST00000394023 PKNOX2Q96KN3 472 aa20.91■□□□□ 0.94
SMARCC2-203ENST00000394023 SWAP70Q9UH65 585 aa20.91■□□□□ 0.94
SMARCC2-203ENST00000394023 PPP1R12BO60237 982 aaPredicted RBP20.9■□□□□ 0.94
SMARCC2-203ENST00000394023 PPP1R2P41236 205 aa20.9■□□□□ 0.94
SMARCC2-203ENST00000394023 IQCEQ6IPM2 695 aa20.9■□□□□ 0.94
SMARCC2-203ENST00000394023 SP8Q8IXZ3 490 aa20.9■□□□□ 0.94
SMARCC2-203ENST00000394023 LARGE2Q8N3Y3 721 aa20.9■□□□□ 0.94
SMARCC2-203ENST00000394023 CSRNP1Q96S65 589 aa20.9■□□□□ 0.94
SMARCC2-203ENST00000394023 TRIM9Q9C026 710 aa20.9■□□□□ 0.94
SMARCC2-203ENST00000394023 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.9■□□□□ 0.94
SMARCC2-203ENST00000394023 GYPCP04921 128 aa20.9■□□□□ 0.94
SMARCC2-203ENST00000394023 NFIAQ12857 509 aa20.9■□□□□ 0.94
SMARCC2-203ENST00000394023 CUEDC2Q9H467 287 aa20.9■□□□□ 0.94
SMARCC2-203ENST00000394023 NDUFA10O95299 355 aa20.9■□□□□ 0.94
SMARCC2-203ENST00000394023 TAF4BQ92750 862 aa20.9■□□□□ 0.94
SMARCC2-203ENST00000394023 DDX12PQ92771 950 aa20.9■□□□□ 0.94
SMARCC2-203ENST00000394023 EEF2P13639 858 aaKnown RBP20.9■□□□□ 0.94
SMARCC2-203ENST00000394023 ANKRD40Q6AI12 368 aa20.9■□□□□ 0.94
SMARCC2-203ENST00000394023 PDXDC2PQ6P474 469 aa20.9■□□□□ 0.94
SMARCC2-203ENST00000394023 FBXO11Q86XK2 927 aa20.9■□□□□ 0.94
SMARCC2-203ENST00000394023 ZMYND12Q9H0C1 365 aa20.9■□□□□ 0.94
SMARCC2-203ENST00000394023 PLEKHA4Q9H4M7 779 aa20.9■□□□□ 0.94
SMARCC2-203ENST00000394023 KANSL2Q9H9L4 492 aa20.9■□□□□ 0.94
SMARCC2-203ENST00000394023 DNM3Q9UQ16 869 aa20.9■□□□□ 0.94
SMARCC2-203ENST00000394023 POTEB2H3BUK9 544 aa20.89■□□□□ 0.94
SMARCC2-203ENST00000394023 RAD17O75943 681 aa20.89■□□□□ 0.94
SMARCC2-203ENST00000394023 MAGEA1P43355 309 aa20.89■□□□□ 0.94
SMARCC2-203ENST00000394023 IL17AQ16552 155 aa20.89■□□□□ 0.94
SMARCC2-203ENST00000394023 CPXCR1Q8N123 301 aa20.89■□□□□ 0.94
SMARCC2-203ENST00000394023 ADSSL1Q8N142 457 aa20.89■□□□□ 0.94
SMARCC2-203ENST00000394023 GPR161Q8N6U8 529 aaKnown RBP20.89■□□□□ 0.94
SMARCC2-203ENST00000394023 IFIH1Q9BYX4 1025 aaKnown RBP20.89■□□□□ 0.94
SMARCC2-203ENST00000394023 CDC23Q9UJX2 597 aa20.89■□□□□ 0.94
SMARCC2-203ENST00000394023 LAMB4A4D0S4 1761 aa20.89■□□□□ 0.93
SMARCC2-203ENST00000394023 LMAN1P49257 510 aa20.89■□□□□ 0.93
SMARCC2-203ENST00000394023 CCDC17Q96LX7 622 aa20.89■□□□□ 0.93
SMARCC2-203ENST00000394023 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.89■□□□□ 0.93
SMARCC2-203ENST00000394023 HDAC9Q9UKV0 1011 aa20.89■□□□□ 0.93
SMARCC2-203ENST00000394023 TMCO5BA8MYB1 307 aa20.89■□□□□ 0.93
SMARCC2-203ENST00000394023 CDC37Q16543 378 aaPredicted RBP20.89■□□□□ 0.93
SMARCC2-203ENST00000394023 TMED8Q6PL24 325 aaPredicted RBP20.89■□□□□ 0.93
SMARCC2-203ENST00000394023 TXLNBQ8N3L3 684 aa20.89■□□□□ 0.93
SMARCC2-203ENST00000394023 TFR2Q9UP52 801 aa20.89■□□□□ 0.93
SMARCC2-203ENST00000394023 FAM13AO94988 1023 aa20.88■□□□□ 0.93
SMARCC2-203ENST00000394023 USP8P40818 1118 aa20.88■□□□□ 0.93
SMARCC2-203ENST00000394023 HAUS3Q68CZ6 603 aa20.88■□□□□ 0.93
SMARCC2-203ENST00000394023 CDC42EP5Q6NZY7 148 aa20.88■□□□□ 0.93
SMARCC2-203ENST00000394023 TPH2Q8IWU9 490 aa20.88■□□□□ 0.93
SMARCC2-203ENST00000394023 ELOA2Q8IYF1 753 aaPredicted RBP20.88■□□□□ 0.93
SMARCC2-203ENST00000394023 SHISA4Q96DD7 197 aa20.88■□□□□ 0.93
SMARCC2-203ENST00000394023 CEP89Q96ST8 783 aa20.88■□□□□ 0.93
SMARCC2-203ENST00000394023 CCSER1Q9C0I3 900 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms