RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 KCTD1Q719H9 257 aa16.06■□□□□ 0.16
MKS1-203ENST00000393120 GMCL1P1Q8NEA9 526 aa16.06■□□□□ 0.16
MKS1-203ENST00000393120 TSC1Q92574 1164 aa16.06■□□□□ 0.16
MKS1-203ENST00000393120 TRIM34Q9BYJ4 488 aa16.06■□□□□ 0.16
MKS1-203ENST00000393120 THAP9Q9H5L6 903 aa16.06■□□□□ 0.16
MKS1-203ENST00000393120 L2HGDHQ9H9P8 463 aa16.06■□□□□ 0.16
MKS1-203ENST00000393120 LRWD1Q9UFC0 647 aa16.06■□□□□ 0.16
MKS1-203ENST00000393120 PPP2R2CQ9Y2T4 447 aa16.06■□□□□ 0.16
MKS1-203ENST00000393120 SIPA1L1O43166 1804 aa16.06■□□□□ 0.16
MKS1-203ENST00000393120 SLC37A4O43826 429 aa16.06■□□□□ 0.16
MKS1-203ENST00000393120 EEF1GP26641 437 aaKnown RBP16.06■□□□□ 0.16
MKS1-203ENST00000393120 SLC16A2P36021 539 aa16.06■□□□□ 0.16
MKS1-203ENST00000393120 MCTP2Q6DN12 878 aa16.06■□□□□ 0.16
MKS1-203ENST00000393120 CNNM4Q6P4Q7 775 aa16.06■□□□□ 0.16
MKS1-203ENST00000393120 IRF2BP1Q8IU81 584 aa16.06■□□□□ 0.16
MKS1-203ENST00000393120 GMCL1Q96IK5 515 aa16.06■□□□□ 0.16
MKS1-203ENST00000393120 PLIN2Q99541 437 aa16.06■□□□□ 0.16
MKS1-203ENST00000393120 PHLPP2Q6ZVD8 1323 aa16.05■□□□□ 0.16
MKS1-203ENST00000393120 SCN9AQ15858 1988 aa16.05■□□□□ 0.16
MKS1-203ENST00000393120 N4BP3O15049 544 aa16.05■□□□□ 0.16
MKS1-203ENST00000393120 TDP2O95551 362 aa16.05■□□□□ 0.16
MKS1-203ENST00000393120 RBL2Q08999 1139 aa16.05■□□□□ 0.16
MKS1-203ENST00000393120 GRB10Q13322 594 aa16.05■□□□□ 0.16
MKS1-203ENST00000393120 TRIM14Q14142 442 aa16.05■□□□□ 0.16
MKS1-203ENST00000393120 TRIM65Q6PJ69 517 aa16.05■□□□□ 0.16
MKS1-203ENST00000393120 CNGA4Q8IV77 575 aa16.05■□□□□ 0.16
MKS1-203ENST00000393120 ZSCAN29Q8IWY8 852 aaPredicted RBP16.05■□□□□ 0.16
MKS1-203ENST00000393120 PVALEFA0A1B0GWK0 134 aa16.04■□□□□ 0.16
MKS1-203ENST00000393120 SLC26A4O43511 780 aa16.04■□□□□ 0.16
MKS1-203ENST00000393120 MFAP3LO75121 409 aa16.04■□□□□ 0.16
MKS1-203ENST00000393120 TNNI2P48788 182 aa16.04■□□□□ 0.16
MKS1-203ENST00000393120 USP11P51784 963 aa16.04■□□□□ 0.16
MKS1-203ENST00000393120 ICA1Q05084 483 aa16.04■□□□□ 0.16
MKS1-203ENST00000393120 SEPT2Q15019 361 aa16.04■□□□□ 0.16
MKS1-203ENST00000393120 ABCB5Q2M3G0 1257 aa16.04■□□□□ 0.16
MKS1-203ENST00000393120 QRICH1Q2TAL8 776 aa16.04■□□□□ 0.16
MKS1-203ENST00000393120 TTI2Q6NXR4 508 aa16.04■□□□□ 0.16
MKS1-203ENST00000393120 SYT10Q6XYQ8 523 aa16.04■□□□□ 0.16
MKS1-203ENST00000393120 SV2BQ7L1I2 683 aa16.04■□□□□ 0.16
MKS1-203ENST00000393120 LRRC27Q9C0I9 530 aa16.04■□□□□ 0.16
MKS1-203ENST00000393120 EXOC1Q9NV70 894 aa16.04■□□□□ 0.16
MKS1-203ENST00000393120 ZNF219Q9P2Y4 722 aaPredicted RBP16.04■□□□□ 0.16
MKS1-203ENST00000393120 BICDL2A1A5D9 508 aa16.04■□□□□ 0.16
MKS1-203ENST00000393120 YDJCA8MPS7 323 aa16.04■□□□□ 0.16
MKS1-203ENST00000393120 TPM1P09493 284 aa16.04■□□□□ 0.16
MKS1-203ENST00000393120 SLURP2P0DP57 97 aa16.04■□□□□ 0.16
MKS1-203ENST00000393120 CCDC93Q567U6 631 aa16.04■□□□□ 0.16
MKS1-203ENST00000393120 PNMA5Q96PV4 448 aa16.04■□□□□ 0.16
MKS1-203ENST00000393120 TDRD3Q9H7E2 651 aaKnown RBP16.04■□□□□ 0.16
MKS1-203ENST00000393120 BLOC1S4Q9NUP1 217 aa16.04■□□□□ 0.16
MKS1-203ENST00000393120 DDX25Q9UHL0 483 aaKnown RBP16.04■□□□□ 0.16
MKS1-203ENST00000393120 MAPK8IP1Q9UQF2 711 aa16.04■□□□□ 0.16
MKS1-203ENST00000393120 CYP3A7-CYP3A51PA0A087WV96 503 aa16.03■□□□□ 0.16
MKS1-203ENST00000393120 F5H6K3 240 aa16.03■□□□□ 0.16
MKS1-203ENST00000393120 GYPCP04921 128 aa16.03■□□□□ 0.16
MKS1-203ENST00000393120 CYP3A7P24462 503 aa16.03■□□□□ 0.16
MKS1-203ENST00000393120 CCNE1P24864 410 aa16.03■□□□□ 0.16
MKS1-203ENST00000393120 KLRC3Q07444 240 aa16.03■□□□□ 0.16
MKS1-203ENST00000393120 PDE4DQ08499 809 aa16.03■□□□□ 0.16
MKS1-203ENST00000393120 EZH2Q15910 746 aaKnown RBP16.03■□□□□ 0.16
MKS1-203ENST00000393120 UBE2SQ16763 222 aa16.03■□□□□ 0.16
MKS1-203ENST00000393120 KRT79Q5XKE5 535 aa16.03■□□□□ 0.16
MKS1-203ENST00000393120 MOXD1Q6UVY6 613 aa16.03■□□□□ 0.16
MKS1-203ENST00000393120 HAS1Q92839 578 aa16.03■□□□□ 0.16
MKS1-203ENST00000393120 PRMT6Q96LA8 375 aaPredicted RBP16.03■□□□□ 0.16
MKS1-203ENST00000393120 PCDHA1Q9Y5I3 950 aa16.03■□□□□ 0.16
MKS1-203ENST00000393120 A0A1W2PQC6 194 aa16.02■□□□□ 0.16
MKS1-203ENST00000393120 FAM196BA6NMK8 535 aa16.02■□□□□ 0.16
MKS1-203ENST00000393120 PPIP5K2O43314 1243 aa16.02■□□□□ 0.16
MKS1-203ENST00000393120 COBLO75128 1261 aa16.02■□□□□ 0.16
MKS1-203ENST00000393120 CCT6AP40227 531 aaKnown RBP16.02■□□□□ 0.16
MKS1-203ENST00000393120 PMS1P54277 932 aaKnown RBP16.02■□□□□ 0.16
MKS1-203ENST00000393120 ASIC1P78348 528 aa16.02■□□□□ 0.16
MKS1-203ENST00000393120 NCBP1Q09161 790 aaKnown RBP16.02■□□□□ 0.16
MKS1-203ENST00000393120 TMEM119Q4V9L6 283 aa16.02■□□□□ 0.16
MKS1-203ENST00000393120 TEX2Q8IWB9 1127 aa16.02■□□□□ 0.16
MKS1-203ENST00000393120 RTKN2Q8IZC4 609 aa16.02■□□□□ 0.16
MKS1-203ENST00000393120 P2RX5Q93086 422 aa16.02■□□□□ 0.16
MKS1-203ENST00000393120 ERO1AQ96HE7 468 aa16.02■□□□□ 0.16
MKS1-203ENST00000393120 MBOAT7Q96N66 472 aa16.02■□□□□ 0.16
MKS1-203ENST00000393120 PSMD1Q99460 953 aa16.02■□□□□ 0.16
MKS1-203ENST00000393120 HERC5Q9UII4 1024 aaKnown RBP16.02■□□□□ 0.16
MKS1-203ENST00000393120 MYH4Q9Y623 1939 aa16.02■□□□□ 0.15
MKS1-203ENST00000393120 SLU7O95391 586 aaKnown RBP16.02■□□□□ 0.15
MKS1-203ENST00000393120 AP3B2Q13367 1082 aa16.02■□□□□ 0.15
MKS1-203ENST00000393120 CDC37Q16543 378 aaPredicted RBP16.02■□□□□ 0.15
MKS1-203ENST00000393120 HYIQ5T013 277 aa16.02■□□□□ 0.15
MKS1-203ENST00000393120 RBM26Q5T8P6 1007 aaKnown RBP16.02■□□□□ 0.15
MKS1-203ENST00000393120 BTNL9Q6UXG8 535 aa16.02■□□□□ 0.15
MKS1-203ENST00000393120 UNC13DQ70J99 1090 aa16.02■□□□□ 0.15
MKS1-203ENST00000393120 LARP4BQ92615 738 aaKnown RBP16.02■□□□□ 0.15
MKS1-203ENST00000393120 RAD54LQ92698 747 aa16.02■□□□□ 0.15
MKS1-203ENST00000393120 DUSP9Q99956 384 aaKnown RBP16.02■□□□□ 0.15
MKS1-203ENST00000393120 SRRTQ9BXP5 876 aaKnown RBP16.02■□□□□ 0.15
MKS1-203ENST00000393120 VPS33BQ9H267 617 aa16.02■□□□□ 0.15
MKS1-203ENST00000393120 VPS16Q9H269 839 aa16.02■□□□□ 0.15
MKS1-203ENST00000393120 TAB2Q9NYJ8 693 aa16.02■□□□□ 0.15
MKS1-203ENST00000393120 TRIM49BA6NDI0 452 aa16.01■□□□□ 0.15
MKS1-203ENST00000393120 LGALS16A8MUM7 142 aa16.01■□□□□ 0.15
MKS1-203ENST00000393120 CASP14P31944 242 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms