RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 MINPP1Q9UNW1 487 aa13.9□□□□□ -0.18
CLTC-202ENST00000393043 GAS8O95995 478 aa13.9□□□□□ -0.18
CLTC-202ENST00000393043 MXRA7P84157 204 aa13.9□□□□□ -0.18
CLTC-202ENST00000393043 FKBP3Q00688 224 aaKnown RBP13.9□□□□□ -0.18
CLTC-202ENST00000393043 PABPC4Q13310 644 aaKnown RBP eCLIP13.9□□□□□ -0.18
CLTC-202ENST00000393043 AOC3Q16853 763 aa13.9□□□□□ -0.18
CLTC-202ENST00000393043 ERCC6LQ2NKX8 1250 aa13.9□□□□□ -0.18
CLTC-202ENST00000393043 AIFM3Q96NN9 605 aa13.9□□□□□ -0.18
CLTC-202ENST00000393043 BCS1LQ9Y276 419 aa13.9□□□□□ -0.18
CLTC-202ENST00000393043 HPDP32754 393 aaPredicted RBP13.89□□□□□ -0.19
CLTC-202ENST00000393043 LIG4P49917 911 aa13.89□□□□□ -0.19
CLTC-202ENST00000393043 PSMD2Q13200 908 aa13.89□□□□□ -0.19
CLTC-202ENST00000393043 MAN2A1Q16706 1144 aa13.89□□□□□ -0.19
CLTC-202ENST00000393043 EXOC3L4Q17RC7 722 aa13.89□□□□□ -0.19
CLTC-202ENST00000393043 TAOK1Q7L7X3 1001 aa13.89□□□□□ -0.19
CLTC-202ENST00000393043 ZNF579Q8NAF0 562 aaKnown RBP13.89□□□□□ -0.19
CLTC-202ENST00000393043 DYNLL2Q96FJ2 89 aa13.89□□□□□ -0.19
CLTC-202ENST00000393043 C1orf167Q5SNV9 1468 aa13.89□□□□□ -0.19
CLTC-202ENST00000393043 ADRA2BP18089 450 aa13.89□□□□□ -0.19
CLTC-202ENST00000393043 KCNQ4P56696 695 aa13.89□□□□□ -0.19
CLTC-202ENST00000393043 GPIHBP1Q8IV16 184 aa13.89□□□□□ -0.19
CLTC-202ENST00000393043 FOXP4Q8IVH2 680 aaPredicted RBP13.89□□□□□ -0.19
CLTC-202ENST00000393043 MICALL1Q8N3F8 863 aa13.89□□□□□ -0.19
CLTC-202ENST00000393043 CACTINQ8WUQ7 758 aaKnown RBP13.89□□□□□ -0.19
CLTC-202ENST00000393043 PLA2G12BQ9BX93 195 aa13.89□□□□□ -0.19
CLTC-202ENST00000393043 TRIM31Q9BZY9 425 aa13.89□□□□□ -0.19
CLTC-202ENST00000393043 MLXIPQ9HAP2 919 aa13.89□□□□□ -0.19
CLTC-202ENST00000393043 NRXN1Q9ULB1 1477 aa13.89□□□□□ -0.19
CLTC-202ENST00000393043 DMP1Q13316 513 aaPredicted RBP13.89□□□□□ -0.19
CLTC-202ENST00000393043 RESP18Q5W5W9 173 aa13.89□□□□□ -0.19
CLTC-202ENST00000393043 ARMCX5Q6P1M9 558 aa13.89□□□□□ -0.19
CLTC-202ENST00000393043 KCTD1Q719H9 257 aa13.89□□□□□ -0.19
CLTC-202ENST00000393043 PLCB1Q9NQ66 1216 aa13.89□□□□□ -0.19
CLTC-202ENST00000393043 NDUFAB1O14561 156 aa13.89□□□□□ -0.19
CLTC-202ENST00000393043 MAP3K9P80192 1104 aa13.89□□□□□ -0.19
CLTC-202ENST00000393043 CYP4A11Q02928 519 aa13.89□□□□□ -0.19
CLTC-202ENST00000393043 LONRF2Q1L5Z9 754 aa13.89□□□□□ -0.19
CLTC-202ENST00000393043 C1orf112Q9NSG2 853 aa13.89□□□□□ -0.19
CLTC-202ENST00000393043 USP14P54578 494 aa13.88□□□□□ -0.19
CLTC-202ENST00000393043 ODR4Q5SWX8 454 aa13.88□□□□□ -0.19
CLTC-202ENST00000393043 USP17L2Q6R6M4 530 aa13.88□□□□□ -0.19
CLTC-202ENST00000393043 THAP9Q9H5L6 903 aa13.88□□□□□ -0.19
CLTC-202ENST00000393043 IQSEC2Q5JU85 1478 aa13.88□□□□□ -0.19
CLTC-202ENST00000393043 POLR1AO95602 1720 aaPredicted RBP13.88□□□□□ -0.19
CLTC-202ENST00000393043 NBPF26B4DH59 902 aa13.88□□□□□ -0.19
CLTC-202ENST00000393043 PRPF6O94906 941 aaKnown RBP13.88□□□□□ -0.19
CLTC-202ENST00000393043 PTPREP23469 700 aa13.88□□□□□ -0.19
CLTC-202ENST00000393043 CCNE1P24864 410 aa13.88□□□□□ -0.19
CLTC-202ENST00000393043 CCDC6Q16204 474 aa13.88□□□□□ -0.19
CLTC-202ENST00000393043 NBPF10Q6P3W6 841 aaKnown RBP13.88□□□□□ -0.19
CLTC-202ENST00000393043 NBPF15Q8N660 670 aa13.88□□□□□ -0.19
CLTC-202ENST00000393043 PAGE5Q96GU1 130 aa13.88□□□□□ -0.19
CLTC-202ENST00000393043 DBNDD1Q9H9R9 158 aa13.88□□□□□ -0.19
CLTC-202ENST00000393043 PNMA6FA0A0J9YX94 578 aa13.88□□□□□ -0.19
CLTC-202ENST00000393043 E7EVH7 732 aa13.88□□□□□ -0.19
CLTC-202ENST00000393043 STK10O94804 968 aaKnown RBP13.88□□□□□ -0.19
CLTC-202ENST00000393043 OAS2P29728 719 aaKnown RBP13.88□□□□□ -0.19
CLTC-202ENST00000393043 VSTM4Q8IW00 320 aa13.88□□□□□ -0.19
CLTC-202ENST00000393043 CDC23Q9UJX2 597 aa13.88□□□□□ -0.19
CLTC-202ENST00000393043 SARM1Q6SZW1 724 aa13.88□□□□□ -0.19
CLTC-202ENST00000393043 DDX41Q9UJV9 622 aaKnown RBP13.88□□□□□ -0.19
CLTC-202ENST00000393043 USTQ9Y2C2 406 aa13.88□□□□□ -0.19
CLTC-202ENST00000393043 FRMPD1Q5SYB0 1578 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 USP32Q8NFA0 1604 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 KCNK3O14649 394 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 KRT19P08727 400 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 NR2F2P24468 414 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 ZMYND15Q9H091 742 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 USP17L3A6NCW0 530 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 USP17L4A6NCW7 530 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 VIMP08670 466 aaKnown RBP13.87□□□□□ -0.19
CLTC-202ENST00000393043 USP17L1Q7RTZ2 530 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 SEPT12Q8IYM1 358 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 SMCR8Q8TEV9 937 aaPredicted RBP13.87□□□□□ -0.19
CLTC-202ENST00000393043 RABGGTAQ92696 567 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 SLC5A4Q9NY91 659 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 GINS2Q9Y248 185 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 NEDD4P46934 1319 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 CPDO75976 1380 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 PIK3C2BO00750 1634 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 RBL2Q08999 1139 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 GRM1Q13255 1194 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 SYDE2Q5VT97 1194 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 GRAMD1CQ8IYS0 662 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 ANKRD35Q8N283 1001 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 ATP6V0A1Q93050 837 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 ZNF577Q9BSK1 485 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 ZNF408Q9H9D4 720 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 NRBP2Q9NSY0 501 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 PHLPP2Q6ZVD8 1323 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 IQGAP1P46940 1657 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 PLEKHA8P1O95397 391 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 ABCB4P21439 1286 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 STAT2P52630 851 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 GJA10Q969M2 543 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 COA7Q96BR5 231 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 NACC1Q96RE7 527 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 TRIM7Q9C029 511 aa13.87□□□□□ -0.19
CLTC-202ENST00000393043 PDE6CP51160 858 aa13.86□□□□□ -0.19
CLTC-202ENST00000393043 SMYD4Q8IYR2 804 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms