RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 N4BP1O75113 896 aaKnown RBP20.63■□□□□ 0.89
TRAF3-203ENST00000392745 NPM3O75607 178 aaKnown RBP20.63■□□□□ 0.89
TRAF3-203ENST00000392745 GOLGA5Q8TBA6 731 aa20.63■□□□□ 0.89
TRAF3-203ENST00000392745 ACTN4O43707 911 aaKnown RBP20.62■□□□□ 0.89
TRAF3-203ENST00000392745 SNHG28P0DPA3 235 aa20.62■□□□□ 0.89
TRAF3-203ENST00000392745 SMARCA1P28370 1054 aa20.62■□□□□ 0.89
TRAF3-203ENST00000392745 ZNF569Q5MCW4 686 aa20.62■□□□□ 0.89
TRAF3-203ENST00000392745 RSBN1LQ6PCB5 846 aaPredicted RBP20.62■□□□□ 0.89
TRAF3-203ENST00000392745 IGSF22Q8N9C0 903 aa20.62■□□□□ 0.89
TRAF3-203ENST00000392745 MYO1CO00159 1063 aa20.62■□□□□ 0.89
TRAF3-203ENST00000392745 KIF5CO60282 957 aa20.62■□□□□ 0.89
TRAF3-203ENST00000392745 VIL1P09327 827 aaKnown RBP20.62■□□□□ 0.89
TRAF3-203ENST00000392745 STX17P56962 302 aa20.62■□□□□ 0.89
TRAF3-203ENST00000392745 HNRNPLLQ8WVV9 542 aaKnown RBP20.62■□□□□ 0.89
TRAF3-203ENST00000392745 ZFP91Q96JP5 570 aaPredicted RBP20.62■□□□□ 0.89
TRAF3-203ENST00000392745 PIGSQ96S52 555 aa20.62■□□□□ 0.89
TRAF3-203ENST00000392745 ZBTB12Q9Y330 459 aaPredicted RBP20.62■□□□□ 0.89
TRAF3-203ENST00000392745 KLHL10Q6JEL2 608 aa20.61■□□□□ 0.89
TRAF3-203ENST00000392745 C10orf67Q8IYJ2 551 aa20.61■□□□□ 0.89
TRAF3-203ENST00000392745 GMLQ99445 158 aa20.61■□□□□ 0.89
TRAF3-203ENST00000392745 RIOX1Q9H6W3 641 aa20.61■□□□□ 0.89
TRAF3-203ENST00000392745 ABCB6Q9NP58 842 aa20.61■□□□□ 0.89
TRAF3-203ENST00000392745 PCDHA6Q9UN73 950 aa20.61■□□□□ 0.89
TRAF3-203ENST00000392745 PCDHA8Q9Y5H6 950 aa20.61■□□□□ 0.89
TRAF3-203ENST00000392745 ABL1P00519 1130 aa20.61■□□□□ 0.89
TRAF3-203ENST00000392745 PTGDRQ13258 359 aa20.61■□□□□ 0.89
TRAF3-203ENST00000392745 CEP112Q8N8E3 955 aa20.61■□□□□ 0.89
TRAF3-203ENST00000392745 TRIML1Q8N9V2 468 aa20.61■□□□□ 0.89
TRAF3-203ENST00000392745 CCDC17Q96LX7 622 aa20.61■□□□□ 0.89
TRAF3-203ENST00000392745 RAB21Q9UL25 225 aa20.61■□□□□ 0.89
TRAF3-203ENST00000392745 ACTN2P35609 894 aa20.6■□□□□ 0.89
TRAF3-203ENST00000392745 HDXQ7Z353 690 aa20.6■□□□□ 0.89
TRAF3-203ENST00000392745 PPFIBP1Q86W92 1011 aa20.6■□□□□ 0.89
TRAF3-203ENST00000392745 MSANTD4Q8NCY6 345 aa20.6■□□□□ 0.89
TRAF3-203ENST00000392745 RRP36Q96EU6 259 aaKnown RBP20.6■□□□□ 0.89
TRAF3-203ENST00000392745 PIM2Q9P1W9 311 aa20.6■□□□□ 0.89
TRAF3-203ENST00000392745 RHOXF2BP0C7M4 288 aa20.6■□□□□ 0.89
TRAF3-203ENST00000392745 CD44P16070 742 aaKnown RBP20.6■□□□□ 0.89
TRAF3-203ENST00000392745 CASP1P29466 404 aa20.6■□□□□ 0.89
TRAF3-203ENST00000392745 TRAPPC10P48553 1259 aa20.6■□□□□ 0.89
TRAF3-203ENST00000392745 ATP2B2Q01814 1243 aa20.6■□□□□ 0.89
TRAF3-203ENST00000392745 KIF4BQ2VIQ3 1234 aa20.6■□□□□ 0.89
TRAF3-203ENST00000392745 CERKLQ49MI3 558 aaPredicted RBP20.6■□□□□ 0.89
TRAF3-203ENST00000392745 TATDN1Q6P1N9 297 aa20.6■□□□□ 0.89
TRAF3-203ENST00000392745 DAGLBQ8NCG7 672 aa20.6■□□□□ 0.89
TRAF3-203ENST00000392745 CCDC148Q8NFR7 591 aa20.6■□□□□ 0.89
TRAF3-203ENST00000392745 RHOXF2Q9BQY4 288 aa20.6■□□□□ 0.89
TRAF3-203ENST00000392745 L1RE1Q9UN81 338 aa20.6■□□□□ 0.89
TRAF3-203ENST00000392745 ATP2C1P98194 919 aaPredicted RBP20.59■□□□□ 0.89
TRAF3-203ENST00000392745 SPATA20Q8TB22 786 aa20.59■□□□□ 0.89
TRAF3-203ENST00000392745 EPSTI1Q96J88 318 aa20.59■□□□□ 0.89
TRAF3-203ENST00000392745 ZMYND12Q9H0C1 365 aa20.59■□□□□ 0.89
TRAF3-203ENST00000392745 GPCPD1Q9NPB8 672 aa20.59■□□□□ 0.89
TRAF3-203ENST00000392745 CWC15Q9P013 229 aaKnown RBP20.59■□□□□ 0.89
TRAF3-203ENST00000392745 ERCC5P28715 1186 aaPredicted RBP20.59■□□□□ 0.89
TRAF3-203ENST00000392745 CASP14P31944 242 aa20.59■□□□□ 0.89
TRAF3-203ENST00000392745 MCM7P33993 719 aa20.59■□□□□ 0.89
TRAF3-203ENST00000392745 PBX1P40424 430 aa20.59■□□□□ 0.89
TRAF3-203ENST00000392745 ASPRV1Q53RT3 343 aa20.59■□□□□ 0.89
TRAF3-203ENST00000392745 SLC35F6Q8N357 371 aa20.59■□□□□ 0.89
TRAF3-203ENST00000392745 ACRBPQ8NEB7 543 aa20.59■□□□□ 0.89
TRAF3-203ENST00000392745 RASSF4Q9H2L5 321 aa20.59■□□□□ 0.89
TRAF3-203ENST00000392745 ENTPD3O75355 529 aa20.58■□□□□ 0.89
TRAF3-203ENST00000392745 BMP15O95972 392 aa20.58■□□□□ 0.89
TRAF3-203ENST00000392745 TGFB2P61812 414 aa20.58■□□□□ 0.89
TRAF3-203ENST00000392745 GALNT17Q6IS24 598 aa20.58■□□□□ 0.89
TRAF3-203ENST00000392745 NAA15Q9BXJ9 866 aaKnown RBP20.58■□□□□ 0.89
TRAF3-203ENST00000392745 ADD3Q9UEY8 706 aaKnown RBP20.58■□□□□ 0.89
TRAF3-203ENST00000392745 UTRNP46939 3433 aa20.58■□□□□ 0.88
TRAF3-203ENST00000392745 A0A087X0B3 334 aa20.58■□□□□ 0.88
TRAF3-203ENST00000392745 SPDYE2BA6NHP3 402 aa20.58■□□□□ 0.88
TRAF3-203ENST00000392745 MFAP3LO75121 409 aa20.58■□□□□ 0.88
TRAF3-203ENST00000392745 SPDYE6P0CI01 402 aa20.58■□□□□ 0.88
TRAF3-203ENST00000392745 AFMP43652 599 aa20.58■□□□□ 0.88
TRAF3-203ENST00000392745 NAPAP54920 295 aa20.58■□□□□ 0.88
TRAF3-203ENST00000392745 VSNL1P62760 191 aa20.58■□□□□ 0.88
TRAF3-203ENST00000392745 ZNF543Q08ER8 600 aa20.58■□□□□ 0.88
TRAF3-203ENST00000392745 TTBK2Q6IQ55 1244 aa20.58■□□□□ 0.88
TRAF3-203ENST00000392745 SRLQ86TD4 932 aa20.58■□□□□ 0.88
TRAF3-203ENST00000392745 SIAH1Q8IUQ4 282 aa20.58■□□□□ 0.88
TRAF3-203ENST00000392745 SMYD4Q8IYR2 804 aaPredicted RBP20.58■□□□□ 0.88
TRAF3-203ENST00000392745 SEC63Q9UGP8 760 aaKnown RBP20.58■□□□□ 0.88
TRAF3-203ENST00000392745 FAN1Q9Y2M0 1017 aa20.58■□□□□ 0.88
TRAF3-203ENST00000392745 IL17AQ16552 155 aa20.57■□□□□ 0.88
TRAF3-203ENST00000392745 CCDC125Q86Z20 511 aa20.57■□□□□ 0.88
TRAF3-203ENST00000392745 FERMT2Q96AC1 680 aa20.57■□□□□ 0.88
TRAF3-203ENST00000392745 ATRNL1Q5VV63 1379 aa20.57■□□□□ 0.88
TRAF3-203ENST00000392745 CCDC194A0A1B0GVG4 234 aa20.56■□□□□ 0.88
TRAF3-203ENST00000392745 CLRN2A0PK11 232 aa20.56■□□□□ 0.88
TRAF3-203ENST00000392745 CTAGE9A4FU28 777 aa20.56■□□□□ 0.88
TRAF3-203ENST00000392745 SMCO2A6NFE2 343 aa20.56■□□□□ 0.88
TRAF3-203ENST00000392745 EEF2P13639 858 aaKnown RBP20.56■□□□□ 0.88
TRAF3-203ENST00000392745 FXR1P51114 621 aaKnown RBP eCLIP20.56■□□□□ 0.88
TRAF3-203ENST00000392745 SPATA1Q5VX52 437 aa20.56■□□□□ 0.88
TRAF3-203ENST00000392745 C4orf32Q8N8J7 132 aa20.56■□□□□ 0.88
TRAF3-203ENST00000392745 ZNRF3Q9ULT6 936 aa20.56■□□□□ 0.88
TRAF3-203ENST00000392745 RRP15Q9Y3B9 282 aaKnown RBP20.56■□□□□ 0.88
TRAF3-203ENST00000392745 SYNRGQ9UMZ2 1314 aa20.56■□□□□ 0.88
TRAF3-203ENST00000392745 TCP10L2B9ZVM9 353 aa20.56■□□□□ 0.88
TRAF3-203ENST00000392745 POTEB2H3BUK9 544 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms