RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 HOMER1Q86YM7 354 aa7.82□□□□□ -1.16
UBBP1-201ENST00000392399 TNS4Q8IZW8 715 aa7.82□□□□□ -1.16
UBBP1-201ENST00000392399 CCDC82Q8N4S0 544 aa7.82□□□□□ -1.16
UBBP1-201ENST00000392399 ARMC5Q96C12 935 aa7.82□□□□□ -1.16
UBBP1-201ENST00000392399 ZSCAN31Q96LW9 406 aaPredicted RBP7.82□□□□□ -1.16
UBBP1-201ENST00000392399 KIF2CQ99661 725 aa7.82□□□□□ -1.16
UBBP1-201ENST00000392399 SLKQ9H2G2 1235 aaPredicted RBP7.82□□□□□ -1.16
UBBP1-201ENST00000392399 FAM217BQ9NTX9 383 aaPredicted RBP7.82□□□□□ -1.16
UBBP1-201ENST00000392399 CYP39A1Q9NYL5 469 aa7.82□□□□□ -1.16
UBBP1-201ENST00000392399 DOCK3Q8IZD9 2030 aa7.81□□□□□ -1.16
UBBP1-201ENST00000392399 B4DLN1 442 aa7.81□□□□□ -1.16
UBBP1-201ENST00000392399 PRPF3O43395 683 aaKnown RBP7.81□□□□□ -1.16
UBBP1-201ENST00000392399 COBLO75128 1261 aa7.81□□□□□ -1.16
UBBP1-201ENST00000392399 CDKL5O76039 1030 aa7.81□□□□□ -1.16
UBBP1-201ENST00000392399 HMGCRP04035 888 aa7.81□□□□□ -1.16
UBBP1-201ENST00000392399 MRPL12P52815 198 aaKnown RBP7.81□□□□□ -1.16
UBBP1-201ENST00000392399 CCT2P78371 535 aaKnown RBP7.81□□□□□ -1.16
UBBP1-201ENST00000392399 AKAP17AQ02040 695 aaKnown RBP7.81□□□□□ -1.16
UBBP1-201ENST00000392399 GHRHRQ02643 423 aa7.81□□□□□ -1.16
UBBP1-201ENST00000392399 BAATQ14032 418 aaPredicted RBP7.81□□□□□ -1.16
UBBP1-201ENST00000392399 NTRK3Q16288 839 aa7.81□□□□□ -1.16
UBBP1-201ENST00000392399 USH1GQ495M9 461 aa7.81□□□□□ -1.16
UBBP1-201ENST00000392399 MUM1L1Q5H9M0 696 aa7.81□□□□□ -1.16
UBBP1-201ENST00000392399 MFSD14CQ5VZR4 134 aa7.81□□□□□ -1.16
UBBP1-201ENST00000392399 MAMDC4Q6UXC1 1216 aa7.81□□□□□ -1.16
UBBP1-201ENST00000392399 RNF207Q6ZRF8 634 aa7.81□□□□□ -1.16
UBBP1-201ENST00000392399 RAB11FIP4Q86YS3 637 aa7.81□□□□□ -1.16
UBBP1-201ENST00000392399 TRIM22Q8IYM9 498 aa7.81□□□□□ -1.16
UBBP1-201ENST00000392399 FAM177A1Q8N128 213 aaPredicted RBP7.81□□□□□ -1.16
UBBP1-201ENST00000392399 CMTR1Q8N1G2 835 aaKnown RBP7.81□□□□□ -1.16
UBBP1-201ENST00000392399 FAM133AQ8N9E0 248 aa7.81□□□□□ -1.16
UBBP1-201ENST00000392399 DNERQ8NFT8 737 aa7.81□□□□□ -1.16
UBBP1-201ENST00000392399 CLEC4DQ8WXI8 215 aa7.81□□□□□ -1.16
UBBP1-201ENST00000392399 MAML3Q96JK9 1138 aa7.81□□□□□ -1.16
UBBP1-201ENST00000392399 MPHOSPH6Q99547 160 aaKnown RBP7.81□□□□□ -1.16
UBBP1-201ENST00000392399 RNF26Q9BY78 433 aaPredicted RBP7.81□□□□□ -1.16
UBBP1-201ENST00000392399 GLT8D2Q9H1C3 349 aa7.81□□□□□ -1.16
UBBP1-201ENST00000392399 A1CFQ9NQ94 594 aaKnown RBP7.81□□□□□ -1.16
UBBP1-201ENST00000392399 TSHZ2Q9NRE2 1034 aa7.81□□□□□ -1.16
UBBP1-201ENST00000392399 HOMER2Q9NSB8 354 aa7.81□□□□□ -1.16
UBBP1-201ENST00000392399 BIN2Q9UBW5 565 aaPredicted RBP7.81□□□□□ -1.16
UBBP1-201ENST00000392399 ADD3Q9UEY8 706 aaKnown RBP7.81□□□□□ -1.16
UBBP1-201ENST00000392399 NRBP1Q9UHY1 535 aa7.81□□□□□ -1.16
UBBP1-201ENST00000392399 TPCN1Q9ULQ1 816 aa7.81□□□□□ -1.16
UBBP1-201ENST00000392399 LIMCH1Q9UPQ0 1083 aa7.81□□□□□ -1.16
UBBP1-201ENST00000392399 V9GY48 417 aaPredicted RBP7.81□□□□□ -1.16
UBBP1-201ENST00000392399 MGAMO43451 1857 aa7.81□□□□□ -1.16
UBBP1-201ENST00000392399 CNTNAP5Q8WYK1 1306 aa7.8□□□□□ -1.16
UBBP1-201ENST00000392399 COL11A1P12107 1806 aaPredicted RBP7.8□□□□□ -1.16
UBBP1-201ENST00000392399 BAZ2BQ9UIF8 2168 aaKnown RBP7.8□□□□□ -1.16
UBBP1-201ENST00000392399 PTPDC1A2A3K4 754 aa7.8□□□□□ -1.16
UBBP1-201ENST00000392399 ASB14A6NK59 587 aa7.8□□□□□ -1.16
UBBP1-201ENST00000392399 NFIBO00712 420 aa7.8□□□□□ -1.16
UBBP1-201ENST00000392399 PPP1R11O60927 126 aaPredicted RBP7.8□□□□□ -1.16
UBBP1-201ENST00000392399 IGHA2P01877 340 aa7.8□□□□□ -1.16
UBBP1-201ENST00000392399 PGK2P07205 417 aa7.8□□□□□ -1.16
UBBP1-201ENST00000392399 HSD17B4P51659 736 aa7.8□□□□□ -1.16
UBBP1-201ENST00000392399 RPS6P62753 249 aaKnown RBP7.8□□□□□ -1.16
UBBP1-201ENST00000392399 SSRP1Q08945 709 aaKnown RBP7.8□□□□□ -1.16
UBBP1-201ENST00000392399 PFKFB3Q16875 520 aaPredicted RBP7.8□□□□□ -1.16
UBBP1-201ENST00000392399 PPP1R18Q6NYC8 613 aa7.8□□□□□ -1.16
UBBP1-201ENST00000392399 NSMFQ6X4W1 530 aa7.8□□□□□ -1.16
UBBP1-201ENST00000392399 IFNLR1Q8IU57 520 aaPredicted RBP7.8□□□□□ -1.16
UBBP1-201ENST00000392399 NPLOC4Q8TAT6 608 aa7.8□□□□□ -1.16
UBBP1-201ENST00000392399 CCDC12Q8WUD4 166 aaPredicted RBP7.8□□□□□ -1.16
UBBP1-201ENST00000392399 TRIB2Q92519 343 aa7.8□□□□□ -1.16
UBBP1-201ENST00000392399 ZNF333Q96JL9 665 aa7.8□□□□□ -1.16
UBBP1-201ENST00000392399 TINF2Q9BSI4 451 aa7.8□□□□□ -1.16
UBBP1-201ENST00000392399 TMEM106CQ9BVX2 250 aa7.8□□□□□ -1.16
UBBP1-201ENST00000392399 SH2B1Q9NRF2 756 aaPredicted RBP7.8□□□□□ -1.16
UBBP1-201ENST00000392399 BARHL2Q9NY43 387 aa7.8□□□□□ -1.16
UBBP1-201ENST00000392399 RPTORQ8N122 1335 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 SYNGAP1Q96PV0 1343 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 GCOM1H8Y6P7 765 aaPredicted RBP7.79□□□□□ -1.16
UBBP1-201ENST00000392399 PIK3CDO00329 1044 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 DEXIO95424 95 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 CFBP00751 764 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 INHAP05111 366 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 POLR2MP0CAP2 368 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 CHRM1P11229 460 aaPredicted RBP7.79□□□□□ -1.16
UBBP1-201ENST00000392399 SCG2P13521 617 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 ELNP15502 786 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 CALML3P27482 149 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 SCRN1Q12765 414 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 STK3Q13188 491 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 CCL14Q16627 93 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 ME3Q16798 604 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 MAP3K21Q5TCX8 1036 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 MCTP2Q6DN12 878 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 NSUN6Q8TEA1 469 aaKnown RBP7.79□□□□□ -1.16
UBBP1-201ENST00000392399 SH3TC2Q8TF17 1288 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 PIBF1Q8WXW3 757 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 CUL5Q93034 780 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 GTF3C6Q969F1 213 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 ABHD8Q96I13 439 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 IWS1Q96ST2 819 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 LARP6Q9BRS8 491 aaKnown RBP7.79□□□□□ -1.16
UBBP1-201ENST00000392399 SLC26A6Q9BXS9 759 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 ABHD16BQ9H3Z7 469 aa7.79□□□□□ -1.16
UBBP1-201ENST00000392399 PSTPIP2Q9H939 334 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms