RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 KCNN1Q92952 543 aa9.04□□□□□ -0.96
SNORA40.4-201ENST00000390971 PPP1R16BQ96T49 567 aa9.04□□□□□ -0.96
SNORA40.4-201ENST00000390971 TNFRSF12AQ9NP84 129 aa9.04□□□□□ -0.96
SNORA40.4-201ENST00000390971 CCDC85CA6NKD9 419 aa9.03□□□□□ -0.96
SNORA40.4-201ENST00000390971 GFRA1P56159 465 aa9.03□□□□□ -0.96
SNORA40.4-201ENST00000390971 YBX1P67809 324 aaKnown RBP9.03□□□□□ -0.96
SNORA40.4-201ENST00000390971 SERINC3Q13530 473 aa9.03□□□□□ -0.96
SNORA40.4-201ENST00000390971 NR1I3Q14994 352 aa9.03□□□□□ -0.96
SNORA40.4-201ENST00000390971 RAB3GAP1Q15042 981 aa9.03□□□□□ -0.96
SNORA40.4-201ENST00000390971 SF1Q15637 639 aaKnown RBP9.03□□□□□ -0.96
SNORA40.4-201ENST00000390971 PKN1Q16512 942 aa9.03□□□□□ -0.96
SNORA40.4-201ENST00000390971 BICRALQ6AI39 1079 aa9.03□□□□□ -0.96
SNORA40.4-201ENST00000390971 TMEM132EQ6IEE7 984 aa9.03□□□□□ -0.96
SNORA40.4-201ENST00000390971 LZTR1Q8N653 840 aa9.03□□□□□ -0.96
SNORA40.4-201ENST00000390971 KCNK12Q9HB15 430 aa9.03□□□□□ -0.96
SNORA40.4-201ENST00000390971 TMEM253P0C7T8 217 aa9.02□□□□□ -0.97
SNORA40.4-201ENST00000390971 SDHBP21912 280 aa9.02□□□□□ -0.97
SNORA40.4-201ENST00000390971 GRIA2P42262 883 aa9.02□□□□□ -0.97
SNORA40.4-201ENST00000390971 CBX2Q14781 532 aaPredicted RBP9.02□□□□□ -0.97
SNORA40.4-201ENST00000390971 MTERF2Q49AM1 385 aa9.02□□□□□ -0.97
SNORA40.4-201ENST00000390971 ACBD5Q5T8D3 534 aaPredicted RBP9.02□□□□□ -0.97
SNORA40.4-201ENST00000390971 TMEM145Q8NBT3 493 aa9.02□□□□□ -0.97
SNORA40.4-201ENST00000390971 KREMEN2Q8NCW0 462 aa9.02□□□□□ -0.97
SNORA40.4-201ENST00000390971 PMFBP1Q8TBY8 1022 aa9.02□□□□□ -0.97
SNORA40.4-201ENST00000390971 KCTD13Q8WZ19 329 aa9.02□□□□□ -0.97
SNORA40.4-201ENST00000390971 MKL1Q969V6 931 aa9.02□□□□□ -0.97
SNORA40.4-201ENST00000390971 AARSD1Q9BTE6 412 aaKnown RBP9.02□□□□□ -0.97
SNORA40.4-201ENST00000390971 MEFVO15553 781 aaPredicted RBP9.01□□□□□ -0.97
SNORA40.4-201ENST00000390971 MAP4K2Q12851 820 aa9.01□□□□□ -0.97
SNORA40.4-201ENST00000390971 PAQR3Q6TCH7 311 aa9.01□□□□□ -0.97
SNORA40.4-201ENST00000390971 DIO2Q92813 273 aa9.01□□□□□ -0.97
SNORA40.4-201ENST00000390971 IER2Q9BTL4 223 aa9.01□□□□□ -0.97
SNORA40.4-201ENST00000390971 SPATA9Q9BWV2 254 aa9.01□□□□□ -0.97
SNORA40.4-201ENST00000390971 MCOLN1Q9GZU1 580 aa9.01□□□□□ -0.97
SNORA40.4-201ENST00000390971 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.01□□□□□ -0.97
SNORA40.4-201ENST00000390971 KLHL14Q9P2G3 628 aa9.01□□□□□ -0.97
SNORA40.4-201ENST00000390971 GULP1Q9UBP9 304 aa9.01□□□□□ -0.97
SNORA40.4-201ENST00000390971 TEX51A0A1B0GUA7 166 aa9□□□□□ -0.97
SNORA40.4-201ENST00000390971 MYOCOSA0A1B0GUC4 107 aa9□□□□□ -0.97
SNORA40.4-201ENST00000390971 SRGAP3O43295 1099 aa9□□□□□ -0.97
SNORA40.4-201ENST00000390971 PPP1R11O60927 126 aaPredicted RBP9□□□□□ -0.97
SNORA40.4-201ENST00000390971 SEMA7AO75326 666 aa9□□□□□ -0.97
SNORA40.4-201ENST00000390971 CYBBP04839 570 aa9□□□□□ -0.97
SNORA40.4-201ENST00000390971 C8AP07357 584 aa9□□□□□ -0.97
SNORA40.4-201ENST00000390971 FGFR1P11362 822 aa9□□□□□ -0.97
SNORA40.4-201ENST00000390971 TACR1P25103 407 aa9□□□□□ -0.97
SNORA40.4-201ENST00000390971 SRSF3P84103 164 aaKnown RBP9□□□□□ -0.97
SNORA40.4-201ENST00000390971 KCNAB2Q13303 367 aa9□□□□□ -0.97
SNORA40.4-201ENST00000390971 TESK1Q15569 626 aa9□□□□□ -0.97
SNORA40.4-201ENST00000390971 SLC35F1Q5T1Q4 408 aa9□□□□□ -0.97
SNORA40.4-201ENST00000390971 CABP7Q86V35 215 aa9□□□□□ -0.97
SNORA40.4-201ENST00000390971 USP33Q8TEY7 942 aa9□□□□□ -0.97
SNORA40.4-201ENST00000390971 DEPDC7Q96QD5 511 aa9□□□□□ -0.97
SNORA40.4-201ENST00000390971 DNAJC2Q99543 621 aaKnown RBP9□□□□□ -0.97
SNORA40.4-201ENST00000390971 SIRT5Q9NXA8 310 aa9□□□□□ -0.97
SNORA40.4-201ENST00000390971 RWDD3Q9Y3V2 267 aa9□□□□□ -0.97
SNORA40.4-201ENST00000390971 TRAV20A0A0B4J274 112 aa8.99□□□□□ -0.97
SNORA40.4-201ENST00000390971 NUDT19A8MXV4 375 aa8.99□□□□□ -0.97
SNORA40.4-201ENST00000390971 NFIBO00712 420 aa8.99□□□□□ -0.97
SNORA40.4-201ENST00000390971 IFRD2Q12894 506 aaPredicted RBP8.99□□□□□ -0.97
SNORA40.4-201ENST00000390971 INF2Q27J81 1249 aa8.99□□□□□ -0.97
SNORA40.4-201ENST00000390971 PRSS53Q2L4Q9 553 aa8.99□□□□□ -0.97
SNORA40.4-201ENST00000390971 MBLAC2Q68D91 279 aa8.99□□□□□ -0.97
SNORA40.4-201ENST00000390971 SPATC1Q76KD6 591 aa8.99□□□□□ -0.97
SNORA40.4-201ENST00000390971 PPIL6Q8IXY8 311 aa8.99□□□□□ -0.97
SNORA40.4-201ENST00000390971 MTA3Q9BTC8 594 aa8.99□□□□□ -0.97
SNORA40.4-201ENST00000390971 GOLGA2P5Q9HBQ8 144 aa8.99□□□□□ -0.97
SNORA40.4-201ENST00000390971 ARHGEF4Q9NR80 690 aa8.99□□□□□ -0.97
SNORA40.4-201ENST00000390971 TIMM13Q9Y5L4 95 aaPredicted RBP8.99□□□□□ -0.97
SNORA40.4-201ENST00000390971 PRODHO43272 600 aa8.98□□□□□ -0.97
SNORA40.4-201ENST00000390971 MYO1BO43795 1136 aa8.98□□□□□ -0.97
SNORA40.4-201ENST00000390971 DLX3O60479 287 aa8.98□□□□□ -0.97
SNORA40.4-201ENST00000390971 DBHP09172 617 aa8.98□□□□□ -0.97
SNORA40.4-201ENST00000390971 GLDCP23378 1020 aa8.98□□□□□ -0.97
SNORA40.4-201ENST00000390971 VIPR1P32241 457 aa8.98□□□□□ -0.97
SNORA40.4-201ENST00000390971 LTBRP36941 435 aa8.98□□□□□ -0.97
SNORA40.4-201ENST00000390971 MAPKAPK2P49137 400 aa8.98□□□□□ -0.97
SNORA40.4-201ENST00000390971 GTF2A2P52657 109 aa8.98□□□□□ -0.97
SNORA40.4-201ENST00000390971 SSRP1Q08945 709 aaKnown RBP8.98□□□□□ -0.97
SNORA40.4-201ENST00000390971 NSMFQ6X4W1 530 aa8.98□□□□□ -0.97
SNORA40.4-201ENST00000390971 UBXN4Q92575 508 aa8.98□□□□□ -0.97
SNORA40.4-201ENST00000390971 DPF3Q92784 378 aa8.98□□□□□ -0.97
SNORA40.4-201ENST00000390971 C1orf159Q96HA4 380 aa8.98□□□□□ -0.97
SNORA40.4-201ENST00000390971 SRPK1Q96SB4 655 aaKnown RBP8.98□□□□□ -0.97
SNORA40.4-201ENST00000390971 TMEFF2Q9UIK5 374 aaPredicted RBP8.98□□□□□ -0.97
SNORA40.4-201ENST00000390971 ETV2O00321 342 aaPredicted RBP8.97□□□□□ -0.97
SNORA40.4-201ENST00000390971 ARNTLO00327 626 aa8.97□□□□□ -0.97
SNORA40.4-201ENST00000390971 TSPAN15O95858 294 aa8.97□□□□□ -0.97
SNORA40.4-201ENST00000390971 FUCA1P04066 466 aa8.97□□□□□ -0.97
SNORA40.4-201ENST00000390971 GLI4P10075 376 aa8.97□□□□□ -0.97
SNORA40.4-201ENST00000390971 PABPC1P11940 636 aaKnown RBP8.97□□□□□ -0.97
SNORA40.4-201ENST00000390971 RAP1GAPP47736 663 aa8.97□□□□□ -0.97
SNORA40.4-201ENST00000390971 RPL11P62913 178 aaKnown RBP8.97□□□□□ -0.97
SNORA40.4-201ENST00000390971 RASA3Q14644 834 aa8.97□□□□□ -0.97
SNORA40.4-201ENST00000390971 DENND5AQ6IQ26 1287 aa8.97□□□□□ -0.97
SNORA40.4-201ENST00000390971 RPTNQ6XPR3 784 aa8.97□□□□□ -0.97
SNORA40.4-201ENST00000390971 CCDC103Q8IW40 242 aa8.97□□□□□ -0.97
SNORA40.4-201ENST00000390971 PFDN2Q9UHV9 154 aa8.97□□□□□ -0.97
SNORA40.4-201ENST00000390971 FAM221BA6H8Z2 402 aa8.96□□□□□ -0.98
SNORA40.4-201ENST00000390971 F8W031 263 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms