RNA–Protein interactions for RNA: ENST00000388835.3

KRT18-201, Transcript of keratin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT18, Length 1,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-201ENST00000388835 WDR19Q8NEZ3 1342 aa29.96■■■□□ 2.39
KRT18-201ENST00000388835 NT5C2P49902 561 aa29.95■■■□□ 2.39
KRT18-201ENST00000388835 KRT23Q9C075 422 aa29.95■■■□□ 2.39
KRT18-201ENST00000388835 TNKSO95271 1327 aa29.95■■■□□ 2.39
KRT18-201ENST00000388835 RPS6P62753 249 aaKnown RBP29.94■■■□□ 2.38
KRT18-201ENST00000388835 TBX21Q9UL17 535 aa29.94■■■□□ 2.38
KRT18-201ENST00000388835 TIMP1P01033 207 aa29.94■■■□□ 2.38
KRT18-201ENST00000388835 ANKS1AQ92625 1134 aa29.94■■■□□ 2.38
KRT18-201ENST00000388835 RNPC3Q96LT9 517 aaKnown RBP29.94■■■□□ 2.38
KRT18-201ENST00000388835 CDC37Q16543 378 aaPredicted RBP29.93■■■□□ 2.38
KRT18-201ENST00000388835 SLC17A8Q8NDX2 589 aa29.93■■■□□ 2.38
KRT18-201ENST00000388835 UBAC1Q9BSL1 405 aa29.93■■■□□ 2.38
KRT18-201ENST00000388835 CNNM2Q9H8M5 875 aa29.93■■■□□ 2.38
KRT18-201ENST00000388835 TLR3O15455 904 aaKnown RBP29.92■■■□□ 2.38
KRT18-201ENST00000388835 ZEB2O60315 1214 aa29.92■■■□□ 2.38
KRT18-201ENST00000388835 FAM109BQ6ICB4 259 aaPredicted RBP29.92■■■□□ 2.38
KRT18-201ENST00000388835 FAM126BQ8IXS8 530 aa29.92■■■□□ 2.38
KRT18-201ENST00000388835 ADGRF4Q8IZF3 695 aa29.92■■■□□ 2.38
KRT18-201ENST00000388835 WDR11Q9BZH6 1224 aa29.92■■■□□ 2.38
KRT18-201ENST00000388835 STXBP5LQ9Y2K9 1186 aa29.92■■■□□ 2.38
KRT18-201ENST00000388835 MYH6P13533 1939 aa29.92■■■□□ 2.38
KRT18-201ENST00000388835 PDE4DQ08499 809 aa29.91■■■□□ 2.38
KRT18-201ENST00000388835 ZNF697Q5TEC3 545 aa29.91■■■□□ 2.38
KRT18-201ENST00000388835 PPP1R12CQ9BZL4 782 aa29.91■■■□□ 2.38
KRT18-201ENST00000388835 Q9Y3F1 56 aa29.91■■■□□ 2.38
KRT18-201ENST00000388835 DHX16O60231 1041 aaKnown RBP29.9■■■□□ 2.38
KRT18-201ENST00000388835 CABYRO75952 493 aa29.9■■■□□ 2.38
KRT18-201ENST00000388835 DUSP28Q4G0W2 176 aa29.9■■■□□ 2.38
KRT18-201ENST00000388835 ASPRV1Q53RT3 343 aa29.9■■■□□ 2.38
KRT18-201ENST00000388835 VAT1LQ9HCJ6 419 aa29.9■■■□□ 2.38
KRT18-201ENST00000388835 LOC102724159A0A0B4J2E5 919 aa29.9■■■□□ 2.38
KRT18-201ENST00000388835 PARP1P09874 1014 aaKnown RBP29.9■■■□□ 2.38
KRT18-201ENST00000388835 ITGA7Q13683 1181 aa29.9■■■□□ 2.38
KRT18-201ENST00000388835 PWP2Q15269 919 aaKnown RBP29.9■■■□□ 2.38
KRT18-201ENST00000388835 RAD50Q92878 1312 aa29.89■■■□□ 2.38
KRT18-201ENST00000388835 PSMC6P62333 389 aa29.89■■■□□ 2.38
KRT18-201ENST00000388835 IFIT1BQ5T764 474 aaKnown RBP29.89■■■□□ 2.38
KRT18-201ENST00000388835 MFSD5Q6N075 450 aa29.89■■■□□ 2.38
KRT18-201ENST00000388835 RUFY2Q8WXA3 655 aa29.89■■■□□ 2.38
KRT18-201ENST00000388835 GUCD1Q96NT3 240 aa29.89■■■□□ 2.38
KRT18-201ENST00000388835 CHMLP26374 656 aa29.88■■■□□ 2.37
KRT18-201ENST00000388835 CYB5R4Q7L1T6 521 aa29.88■■■□□ 2.37
KRT18-201ENST00000388835 MPHOSPH6Q99547 160 aaKnown RBP29.88■■■□□ 2.37
KRT18-201ENST00000388835 GRIN2DO15399 1336 aa29.87■■■□□ 2.37
KRT18-201ENST00000388835 SMAD3P84022 425 aaKnown RBP29.87■■■□□ 2.37
KRT18-201ENST00000388835 PTH1RQ03431 593 aa29.87■■■□□ 2.37
KRT18-201ENST00000388835 SLC43A3Q8NBI5 491 aa29.87■■■□□ 2.37
KRT18-201ENST00000388835 DNERQ8NFT8 737 aa29.87■■■□□ 2.37
KRT18-201ENST00000388835 TBC1D5Q92609 795 aa29.87■■■□□ 2.37
KRT18-201ENST00000388835 ABCB11O95342 1321 aa29.87■■■□□ 2.37
KRT18-201ENST00000388835 CD4P01730 458 aa29.86■■■□□ 2.37
KRT18-201ENST00000388835 QRICH1Q2TAL8 776 aa29.86■■■□□ 2.37
KRT18-201ENST00000388835 OR6J1Q8NGC5 347 aa29.86■■■□□ 2.37
KRT18-201ENST00000388835 RBM47A0AV96 593 aaKnown RBP29.86■■■□□ 2.37
KRT18-201ENST00000388835 CSF2RAP15509 400 aa29.86■■■□□ 2.37
KRT18-201ENST00000388835 PPIGQ13427 754 aaKnown RBP eCLIP29.86■■■□□ 2.37
KRT18-201ENST00000388835 STAG2Q8N3U4 1231 aa29.86■■■□□ 2.37
KRT18-201ENST00000388835 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.86■■■□□ 2.374e-7■□□□□ 10.6
KRT18-201ENST00000388835 JMJD4Q9H9V9 463 aa29.86■■■□□ 2.37
KRT18-201ENST00000388835 EDNRBP24530 442 aa29.85■■■□□ 2.37
KRT18-201ENST00000388835 CYP2C18P33260 490 aa29.85■■■□□ 2.37
KRT18-201ENST00000388835 TRDNQ13061 729 aa29.85■■■□□ 2.37
KRT18-201ENST00000388835 SEC23AQ15436 765 aa29.85■■■□□ 2.37
KRT18-201ENST00000388835 FBXO11Q86XK2 927 aa29.85■■■□□ 2.37
KRT18-201ENST00000388835 TMEM199Q8N511 208 aa29.85■■■□□ 2.37
KRT18-201ENST00000388835 RGS22Q8NE09 1264 aa29.85■■■□□ 2.37
KRT18-201ENST00000388835 MYL3P08590 195 aa29.84■■■□□ 2.37
KRT18-201ENST00000388835 PPP2R5BQ15173 497 aa29.84■■■□□ 2.37
KRT18-201ENST00000388835 TRPV6Q9H1D0 765 aa29.84■■■□□ 2.37
KRT18-201ENST00000388835 B4DLN1 442 aa29.83■■■□□ 2.37
KRT18-201ENST00000388835 CYP21A2P08686 494 aa29.83■■■□□ 2.37
KRT18-201ENST00000388835 MRPL12P52815 198 aaKnown RBP29.83■■■□□ 2.37
KRT18-201ENST00000388835 SCFD2Q8WU76 684 aa29.83■■■□□ 2.37
KRT18-201ENST00000388835 COPS5Q92905 334 aa29.83■■■□□ 2.37
KRT18-201ENST00000388835 TAAR1Q96RJ0 339 aa29.83■■■□□ 2.37
KRT18-201ENST00000388835 SEMA6BQ9H3T3 888 aa29.83■■■□□ 2.37
KRT18-201ENST00000388835 U3KPZ7 1027 aaPredicted RBP29.83■■■□□ 2.37
KRT18-201ENST00000388835 ACRP10323 421 aa29.82■■■□□ 2.36
KRT18-201ENST00000388835 CPT1AP50416 773 aa29.82■■■□□ 2.36
KRT18-201ENST00000388835 C16orf59Q7L2K0 433 aa29.82■■■□□ 2.36
KRT18-201ENST00000388835 SYTL5Q8TDW5 730 aaPredicted RBP29.82■■■□□ 2.36
KRT18-201ENST00000388835 HIPK3Q9H422 1215 aa29.82■■■□□ 2.36
KRT18-201ENST00000388835 POLR3EQ9NVU0 708 aa29.82■■■□□ 2.36
KRT18-201ENST00000388835 B4GALT4O60513 344 aa29.81■■■□□ 2.36
KRT18-201ENST00000388835 COL20A1Q9P218 1284 aa29.81■■■□□ 2.36
KRT18-201ENST00000388835 MRPL11Q9Y3B7 192 aaKnown RBP29.81■■■□□ 2.36
KRT18-201ENST00000388835 TAF6LQ9Y6J9 622 aa29.81■■■□□ 2.36
KRT18-201ENST00000388835 UMODL1Q5DID0 1318 aa29.81■■■□□ 2.36
KRT18-201ENST00000388835 KLRF2D3W0D1 207 aa29.81■■■□□ 2.36
KRT18-201ENST00000388835 TXNP10599 105 aaKnown RBP29.81■■■□□ 2.36
KRT18-201ENST00000388835 TMEM240Q5SV17 173 aa29.81■■■□□ 2.36
KRT18-201ENST00000388835 MCF2L2Q86YR7 1114 aa29.81■■■□□ 2.36
KRT18-201ENST00000388835 TTYH1Q9H313 450 aaPredicted RBP29.81■■■□□ 2.36
KRT18-201ENST00000388835 GPHNQ9NQX3 736 aaPredicted RBP29.81■■■□□ 2.36
KRT18-201ENST00000388835 NKRFO15226 690 aaKnown RBP eCLIP29.8■■■□□ 2.36
KRT18-201ENST00000388835 PURAQ00577 322 aaKnown RBP29.8■■■□□ 2.36
KRT18-201ENST00000388835 CDX2Q99626 313 aaPredicted RBP29.8■■■□□ 2.36
KRT18-201ENST00000388835 SEZ6LQ9BYH1 1024 aa29.8■■■□□ 2.36
KRT18-201ENST00000388835 IFIT3O14879 490 aaKnown RBP29.79■■■□□ 2.36
KRT18-201ENST00000388835 SGSM2O43147 1006 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms