RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 PFASO15067 1338 aa17.8■□□□□ 0.44
PDGFB-202ENST00000381551 SMCO2A6NFE2 343 aa17.8■□□□□ 0.44
PDGFB-202ENST00000381551 CFBP00751 764 aa17.8■□□□□ 0.44
PDGFB-202ENST00000381551 HOXC6P09630 235 aa17.8■□□□□ 0.44
PDGFB-202ENST00000381551 HSD17B4P51659 736 aa17.8■□□□□ 0.44
PDGFB-202ENST00000381551 PRKCZQ05513 592 aa17.8■□□□□ 0.44
PDGFB-202ENST00000381551 DPP9Q86TI2 863 aa17.8■□□□□ 0.44
PDGFB-202ENST00000381551 FAM133AQ8N9E0 248 aa17.8■□□□□ 0.44
PDGFB-202ENST00000381551 CCDC12Q8WUD4 166 aaPredicted RBP17.8■□□□□ 0.44
PDGFB-202ENST00000381551 SOCS4Q8WXH5 440 aa17.8■□□□□ 0.44
PDGFB-202ENST00000381551 INTS4Q96HW7 963 aaKnown RBP17.8■□□□□ 0.44
PDGFB-202ENST00000381551 ALG1Q9BT22 464 aa17.8■□□□□ 0.44
PDGFB-202ENST00000381551 ZMYND12Q9H0C1 365 aa17.8■□□□□ 0.44
PDGFB-202ENST00000381551 VPS54Q9P1Q0 977 aa17.8■□□□□ 0.44
PDGFB-202ENST00000381551 GCOM1H8Y6P7 765 aaPredicted RBP17.79■□□□□ 0.44
PDGFB-202ENST00000381551 PIK3CDO00329 1044 aa17.79■□□□□ 0.44
PDGFB-202ENST00000381551 MEIS2O14770 477 aa17.79■□□□□ 0.44
PDGFB-202ENST00000381551 POLR2MP0CAP2 368 aa17.79■□□□□ 0.44
PDGFB-202ENST00000381551 XRCC5P13010 732 aaKnown RBP17.79■□□□□ 0.44
PDGFB-202ENST00000381551 CYP2B6P20813 491 aa17.79■□□□□ 0.44
PDGFB-202ENST00000381551 RGS2P41220 211 aa17.79■□□□□ 0.44
PDGFB-202ENST00000381551 MRPL12P52815 198 aaKnown RBP17.79■□□□□ 0.44
PDGFB-202ENST00000381551 PRMT2P55345 433 aa17.79■□□□□ 0.44
PDGFB-202ENST00000381551 ZNF792Q3KQV3 632 aa17.79■□□□□ 0.44
PDGFB-202ENST00000381551 SLC30A10Q6XR72 485 aa17.79■□□□□ 0.44
PDGFB-202ENST00000381551 FAM177A1Q8N128 213 aaPredicted RBP17.79■□□□□ 0.44
PDGFB-202ENST00000381551 SYTL5Q8TDW5 730 aaPredicted RBP17.79■□□□□ 0.44
PDGFB-202ENST00000381551 PURBQ96QR8 312 aaKnown RBP17.79■□□□□ 0.44
PDGFB-202ENST00000381551 RIC8AQ9NPQ8 531 aa17.79■□□□□ 0.44
PDGFB-202ENST00000381551 GJB4Q9NTQ9 266 aa17.79■□□□□ 0.44
PDGFB-202ENST00000381551 DIS3Q9Y2L1 958 aaKnown RBP17.79■□□□□ 0.44
PDGFB-202ENST00000381551 PLXNB2O15031 1838 aa17.78■□□□□ 0.44
PDGFB-202ENST00000381551 ESYT2A0FGR8 921 aa17.78■□□□□ 0.44
PDGFB-202ENST00000381551 POTEB2H3BUK9 544 aa17.78■□□□□ 0.44
PDGFB-202ENST00000381551 CALML3P27482 149 aa17.78■□□□□ 0.44
PDGFB-202ENST00000381551 HOXA13P31271 388 aaPredicted RBP17.78■□□□□ 0.44
PDGFB-202ENST00000381551 CNTN2Q02246 1040 aa17.78■□□□□ 0.44
PDGFB-202ENST00000381551 IRF5Q13568 498 aa17.78■□□□□ 0.44
PDGFB-202ENST00000381551 USP17L6PQ6QN14 398 aa17.78■□□□□ 0.44
PDGFB-202ENST00000381551 CTU1Q7Z7A3 348 aaKnown RBP17.78■□□□□ 0.44
PDGFB-202ENST00000381551 TEX2Q8IWB9 1127 aa17.78■□□□□ 0.44
PDGFB-202ENST00000381551 CCDC148Q8NFR7 591 aa17.78■□□□□ 0.44
PDGFB-202ENST00000381551 NPLOC4Q8TAT6 608 aa17.78■□□□□ 0.44
PDGFB-202ENST00000381551 CUL5Q93034 780 aa17.78■□□□□ 0.44
PDGFB-202ENST00000381551 GLT8D2Q9H1C3 349 aa17.78■□□□□ 0.44
PDGFB-202ENST00000381551 C6orf50Q9HD87 102 aa17.78■□□□□ 0.44
PDGFB-202ENST00000381551 SLC5A4Q9NY91 659 aa17.78■□□□□ 0.44
PDGFB-202ENST00000381551 COL20A1Q9P218 1284 aa17.78■□□□□ 0.44
PDGFB-202ENST00000381551 SMC3Q9UQE7 1217 aa17.78■□□□□ 0.44
PDGFB-202ENST00000381551 PTPN22Q9Y2R2 807 aa17.78■□□□□ 0.44
PDGFB-202ENST00000381551 SOWAHBA6NEL2 793 aa17.77■□□□□ 0.44
PDGFB-202ENST00000381551 XBP1P17861 261 aa17.77■□□□□ 0.44
PDGFB-202ENST00000381551 GJB2P29033 226 aa17.77■□□□□ 0.44
PDGFB-202ENST00000381551 GNA11P29992 359 aa17.77■□□□□ 0.44
PDGFB-202ENST00000381551 NLRP5P59047 1200 aa17.77■□□□□ 0.44
PDGFB-202ENST00000381551 FAM184AQ8NB25 1140 aa17.77■□□□□ 0.44
PDGFB-202ENST00000381551 TAAR1Q96RJ0 339 aa17.77■□□□□ 0.44
PDGFB-202ENST00000381551 KCNJ14Q9UNX9 436 aa17.77■□□□□ 0.44
PDGFB-202ENST00000381551 ADAMTS3O15072 1205 aa17.76■□□□□ 0.43
PDGFB-202ENST00000381551 ADCY7P51828 1080 aa17.76■□□□□ 0.43
PDGFB-202ENST00000381551 NPY5RQ15761 445 aa17.76■□□□□ 0.43
PDGFB-202ENST00000381551 ZNF467Q7Z7K2 595 aaPredicted RBP17.76■□□□□ 0.43
PDGFB-202ENST00000381551 MAML3Q96JK9 1138 aa17.76■□□□□ 0.43
PDGFB-202ENST00000381551 FGD4Q96M96 766 aa17.76■□□□□ 0.43
PDGFB-202ENST00000381551 PHF20Q9BVI0 1012 aa17.76■□□□□ 0.43
PDGFB-202ENST00000381551 PCDHA4Q9UN74 947 aa17.76■□□□□ 0.43
PDGFB-202ENST00000381551 ASTN1O14525 1302 aa17.75■□□□□ 0.43
PDGFB-202ENST00000381551 IGHA2P01877 340 aa17.75■□□□□ 0.43
PDGFB-202ENST00000381551 CLK2P49760 499 aaKnown RBP17.75■□□□□ 0.43
PDGFB-202ENST00000381551 BECN1Q14457 450 aa17.75■□□□□ 0.43
PDGFB-202ENST00000381551 CCL14Q16627 93 aa17.75■□□□□ 0.43
PDGFB-202ENST00000381551 GALNT17Q6IS24 598 aa17.75■□□□□ 0.43
PDGFB-202ENST00000381551 FCHSD1Q86WN1 690 aa17.75■□□□□ 0.43
PDGFB-202ENST00000381551 DNERQ8NFT8 737 aa17.75■□□□□ 0.43
PDGFB-202ENST00000381551 RAET1EQ8TD07 263 aa17.75■□□□□ 0.43
PDGFB-202ENST00000381551 APBA2Q99767 749 aa17.75■□□□□ 0.43
PDGFB-202ENST00000381551 FLRT1Q9NZU1 646 aa17.75■□□□□ 0.43
PDGFB-202ENST00000381551 ADD3Q9UEY8 706 aaKnown RBP17.75■□□□□ 0.43
PDGFB-202ENST00000381551 ZNF236Q9UL36 1845 aa17.75■□□□□ 0.43
PDGFB-202ENST00000381551 ADCY3O60266 1144 aa17.74■□□□□ 0.43
PDGFB-202ENST00000381551 PKN2Q16513 984 aaKnown RBP17.74■□□□□ 0.43
PDGFB-202ENST00000381551 UBE2SQ16763 222 aa17.74■□□□□ 0.43
PDGFB-202ENST00000381551 KRT40Q6A162 431 aa17.74■□□□□ 0.43
PDGFB-202ENST00000381551 MAMDC4Q6UXC1 1216 aa17.74■□□□□ 0.43
PDGFB-202ENST00000381551 DAGLBQ8NCG7 672 aa17.74■□□□□ 0.43
PDGFB-202ENST00000381551 FBXO18Q8NFZ0 1043 aa17.74■□□□□ 0.43
PDGFB-202ENST00000381551 BICD2Q8TD16 824 aa17.74■□□□□ 0.43
PDGFB-202ENST00000381551 PXYLP1Q8TE99 480 aa17.74■□□□□ 0.43
PDGFB-202ENST00000381551 NSUN6Q8TEA1 469 aaKnown RBP17.74■□□□□ 0.43
PDGFB-202ENST00000381551 C8orf76Q96K31 380 aa17.74■□□□□ 0.43
PDGFB-202ENST00000381551 RMDN3Q96TC7 470 aa17.74■□□□□ 0.43
PDGFB-202ENST00000381551 TSHZ2Q9NRE2 1034 aa17.74■□□□□ 0.43
PDGFB-202ENST00000381551 FOXD4L1Q9NU39 408 aa17.74■□□□□ 0.43
PDGFB-202ENST00000381551 BIN2Q9UBW5 565 aaPredicted RBP17.74■□□□□ 0.43
PDGFB-202ENST00000381551 KIF3AQ9Y496 699 aa17.74■□□□□ 0.43
PDGFB-202ENST00000381551 PTCH2Q9Y6C5 1203 aa17.74■□□□□ 0.43
PDGFB-202ENST00000381551 M0R2N6 131 aa17.73■□□□□ 0.43
PDGFB-202ENST00000381551 FOSP01100 380 aaPredicted RBP17.73■□□□□ 0.43
PDGFB-202ENST00000381551 TRIM29Q14134 588 aa17.73■□□□□ 0.43
PDGFB-202ENST00000381551 OLFML2BQ68BL8 750 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms