RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 GJB1P08034 283 aa22.41■■□□□ 1.18
GTF3A-201ENST00000381140 PDIA3P30101 505 aaKnown RBP22.41■■□□□ 1.18
GTF3A-201ENST00000381140 NEK4P51957 841 aa22.41■■□□□ 1.18
GTF3A-201ENST00000381140 ZNF467Q7Z7K2 595 aaPredicted RBP22.41■■□□□ 1.18
GTF3A-201ENST00000381140 TBC1D32Q96NH3 1257 aa22.41■■□□□ 1.18
GTF3A-201ENST00000381140 NCOA5Q9HCD5 579 aaKnown RBP22.41■■□□□ 1.18
GTF3A-201ENST00000381140 CYBAP13498 195 aa22.4■■□□□ 1.18
GTF3A-201ENST00000381140 AK2P54819 239 aa22.4■■□□□ 1.18
GTF3A-201ENST00000381140 ARMCX2Q7L311 632 aa22.4■■□□□ 1.18
GTF3A-201ENST00000381140 U2AF1L4Q8WU68 220 aaKnown RBP22.4■■□□□ 1.18
GTF3A-201ENST00000381140 PAK6Q9NQU5 681 aaPredicted RBP22.4■■□□□ 1.18
GTF3A-201ENST00000381140 CNPY2Q9Y2B0 182 aa22.4■■□□□ 1.18
GTF3A-201ENST00000381140 LRRC37A2A6NM11 1700 aa22.4■■□□□ 1.18
GTF3A-201ENST00000381140 ASTN1O14525 1302 aa22.4■■□□□ 1.18
GTF3A-201ENST00000381140 PPFIA3O75145 1194 aa22.39■■□□□ 1.18
GTF3A-201ENST00000381140 IGHA2P01877 340 aa22.39■■□□□ 1.18
GTF3A-201ENST00000381140 TFRCP02786 760 aaKnown RBP22.39■■□□□ 1.18
GTF3A-201ENST00000381140 EVCP57679 992 aa22.39■■□□□ 1.18
GTF3A-201ENST00000381140 HEATR3Q7Z4Q2 680 aa22.39■■□□□ 1.18
GTF3A-201ENST00000381140 GPKOWQ92917 476 aaPredicted RBP eCLIP22.39■■□□□ 1.18
GTF3A-201ENST00000381140 IL17RAQ96F46 866 aa22.39■■□□□ 1.18
GTF3A-201ENST00000381140 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.39■■□□□ 1.18
GTF3A-201ENST00000381140 ADD3Q9UEY8 706 aaKnown RBP22.39■■□□□ 1.18
GTF3A-201ENST00000381140 ZHX1Q9UKY1 873 aaPredicted RBP22.39■■□□□ 1.18
GTF3A-201ENST00000381140 V9GY48 417 aaPredicted RBP22.39■■□□□ 1.18
GTF3A-201ENST00000381140 SYNGAP1Q96PV0 1343 aa22.39■■□□□ 1.17
GTF3A-201ENST00000381140 OPLAHO14841 1288 aa22.38■■□□□ 1.17
GTF3A-201ENST00000381140 SNAI1O95863 264 aaPredicted RBP22.38■■□□□ 1.17
GTF3A-201ENST00000381140 HOXA13P31271 388 aaPredicted RBP22.38■■□□□ 1.17
GTF3A-201ENST00000381140 ALDH5A1P51649 535 aaPredicted RBP22.38■■□□□ 1.17
GTF3A-201ENST00000381140 FUT2Q10981 343 aa22.38■■□□□ 1.17
GTF3A-201ENST00000381140 PPP2R5BQ15173 497 aa22.38■■□□□ 1.17
GTF3A-201ENST00000381140 ANO1Q5XXA6 986 aa22.38■■□□□ 1.17
GTF3A-201ENST00000381140 MAMDC4Q6UXC1 1216 aa22.38■■□□□ 1.17
GTF3A-201ENST00000381140 MSL3Q8N5Y2 521 aaKnown RBP22.38■■□□□ 1.17
GTF3A-201ENST00000381140 RGS22Q8NE09 1264 aa22.38■■□□□ 1.17
GTF3A-201ENST00000381140 NID2Q14112 1375 aa22.38■■□□□ 1.17
GTF3A-201ENST00000381140 ASB14A6NK59 587 aa22.38■■□□□ 1.17
GTF3A-201ENST00000381140 SGPL1O95470 568 aa22.38■■□□□ 1.17
GTF3A-201ENST00000381140 GJA8P48165 433 aa22.38■■□□□ 1.17
GTF3A-201ENST00000381140 RBM25P49756 843 aaKnown RBP22.38■■□□□ 1.17
GTF3A-201ENST00000381140 SYTL5Q8TDW5 730 aaPredicted RBP22.38■■□□□ 1.17
GTF3A-201ENST00000381140 ZNF274Q96GC6 653 aaPredicted RBP22.38■■□□□ 1.17
GTF3A-201ENST00000381140 COL20A1Q9P218 1284 aa22.38■■□□□ 1.17
GTF3A-201ENST00000381140 ANKRD1Q15327 319 aa22.37■■□□□ 1.17
GTF3A-201ENST00000381140 EEPD1Q7L9B9 569 aa22.37■■□□□ 1.17
GTF3A-201ENST00000381140 PHKBQ93100 1093 aa22.37■■□□□ 1.17
GTF3A-201ENST00000381140 SHISA4Q96DD7 197 aa22.37■■□□□ 1.17
GTF3A-201ENST00000381140 TAAR1Q96RJ0 339 aa22.37■■□□□ 1.17
GTF3A-201ENST00000381140 DDX20Q9UHI6 824 aaKnown RBP22.37■■□□□ 1.17
GTF3A-201ENST00000381140 TPCN1Q9ULQ1 816 aa22.37■■□□□ 1.17
GTF3A-201ENST00000381140 GCOM1H8Y6P7 765 aaPredicted RBP22.36■■□□□ 1.17
GTF3A-201ENST00000381140 CPLX1O14810 134 aa22.36■■□□□ 1.17
GTF3A-201ENST00000381140 POLR2MP0CAP2 368 aa22.36■■□□□ 1.17
GTF3A-201ENST00000381140 FCHSD1Q86WN1 690 aa22.36■■□□□ 1.17
GTF3A-201ENST00000381140 SLC26A6Q9BXS9 759 aa22.36■■□□□ 1.17
GTF3A-201ENST00000381140 ALDH8A1Q9H2A2 487 aaPredicted RBP22.36■■□□□ 1.17
GTF3A-201ENST00000381140 SLKQ9H2G2 1235 aaPredicted RBP22.36■■□□□ 1.17
GTF3A-201ENST00000381140 SEPT4O43236 478 aa22.35■■□□□ 1.17
GTF3A-201ENST00000381140 MYCNP04198 464 aaPredicted RBP22.35■■□□□ 1.17
GTF3A-201ENST00000381140 HSD17B4P51659 736 aa22.35■■□□□ 1.17
GTF3A-201ENST00000381140 AKAP17AQ02040 695 aaKnown RBP22.35■■□□□ 1.17
GTF3A-201ENST00000381140 PDE4DQ08499 809 aa22.35■■□□□ 1.17
GTF3A-201ENST00000381140 ACVR2BQ13705 512 aa22.35■■□□□ 1.17
GTF3A-201ENST00000381140 WWC2Q6AWC2 1192 aa22.35■■□□□ 1.17
GTF3A-201ENST00000381140 RMDN3Q96TC7 470 aa22.35■■□□□ 1.17
GTF3A-201ENST00000381140 MPHOSPH6Q99547 160 aaKnown RBP22.35■■□□□ 1.17
GTF3A-201ENST00000381140 NRBP1Q9UHY1 535 aa22.35■■□□□ 1.17
GTF3A-201ENST00000381140 KIAA1217Q5T5P2 1943 aa22.34■■□□□ 1.17
GTF3A-201ENST00000381140 ZNF865P0CJ78 1059 aaPredicted RBP22.34■■□□□ 1.17
GTF3A-201ENST00000381140 NAPAP54920 295 aa22.34■■□□□ 1.17
GTF3A-201ENST00000381140 ARHGEF16Q5VV41 709 aa22.34■■□□□ 1.17
GTF3A-201ENST00000381140 FBXO16Q8IX29 292 aaPredicted RBP22.34■■□□□ 1.17
GTF3A-201ENST00000381140 DNERQ8NFT8 737 aa22.34■■□□□ 1.17
GTF3A-201ENST00000381140 CUL5Q93034 780 aa22.34■■□□□ 1.17
GTF3A-201ENST00000381140 LENG1Q96BZ8 264 aaPredicted RBP22.34■■□□□ 1.17
GTF3A-201ENST00000381140 KIF2CQ99661 725 aa22.34■■□□□ 1.17
GTF3A-201ENST00000381140 ABHD16BQ9H3Z7 469 aa22.34■■□□□ 1.17
GTF3A-201ENST00000381140 EIF2AK2P19525 551 aaKnown RBP22.33■■□□□ 1.17
GTF3A-201ENST00000381140 SMARCC2Q8TAQ2 1214 aa22.33■■□□□ 1.17
GTF3A-201ENST00000381140 NSUN6Q8TEA1 469 aaKnown RBP22.33■■□□□ 1.17
GTF3A-201ENST00000381140 MAF1Q9H063 256 aa22.33■■□□□ 1.17
GTF3A-201ENST00000381140 CRISPLD2Q9H0B8 497 aa22.33■■□□□ 1.17
GTF3A-201ENST00000381140 B4DLN1 442 aa22.32■■□□□ 1.16
GTF3A-201ENST00000381140 MSCO60682 206 aa22.32■■□□□ 1.16
GTF3A-201ENST00000381140 AKR1A1P14550 325 aa22.32■■□□□ 1.16
GTF3A-201ENST00000381140 IFNAR1P17181 557 aa22.32■■□□□ 1.16
GTF3A-201ENST00000381140 MRPL12P52815 198 aaKnown RBP22.32■■□□□ 1.16
GTF3A-201ENST00000381140 SCRN1Q12765 414 aa22.32■■□□□ 1.16
GTF3A-201ENST00000381140 NTRK3Q16288 839 aa22.32■■□□□ 1.16
GTF3A-201ENST00000381140 CCDC144BQ3MJ40 725 aa22.32■■□□□ 1.16
GTF3A-201ENST00000381140 LHX8Q68G74 356 aa22.32■■□□□ 1.16
GTF3A-201ENST00000381140 CPLX2Q6PUV4 134 aaKnown RBP22.32■■□□□ 1.16
GTF3A-201ENST00000381140 USP17L6PQ6QN14 398 aa22.32■■□□□ 1.16
GTF3A-201ENST00000381140 PSTPIP2Q9H939 334 aa22.32■■□□□ 1.16
GTF3A-201ENST00000381140 FAM184BQ9ULE4 1060 aa22.32■■□□□ 1.16
GTF3A-201ENST00000381140 STXBP3O00186 592 aa22.31■■□□□ 1.16
GTF3A-201ENST00000381140 PRPF3O43395 683 aaKnown RBP22.31■■□□□ 1.16
GTF3A-201ENST00000381140 DTNBO60941 627 aa22.31■■□□□ 1.16
GTF3A-201ENST00000381140 LARGE1O95461 756 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms