RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 RRAGAQ7L523 313 aa13.93□□□□□ -0.18
CDX2-201ENST00000381020 MYOCDQ8IZQ8 938 aa13.93□□□□□ -0.18
CDX2-201ENST00000381020 CNOT6LQ96LI5 555 aaKnown RBP13.93□□□□□ -0.18
CDX2-201ENST00000381020 F5H6K3 240 aa13.93□□□□□ -0.18
CDX2-201ENST00000381020 LAD1O00515 517 aa13.93□□□□□ -0.18
CDX2-201ENST00000381020 STX10O60499 249 aa13.93□□□□□ -0.18
CDX2-201ENST00000381020 GCNT3O95395 438 aa13.93□□□□□ -0.18
CDX2-201ENST00000381020 KLRC3Q07444 240 aa13.93□□□□□ -0.18
CDX2-201ENST00000381020 OSBPL5Q9H0X9 879 aaPredicted RBP13.93□□□□□ -0.18
CDX2-201ENST00000381020 MRPL44Q9H9J2 332 aaKnown RBP13.93□□□□□ -0.18
CDX2-201ENST00000381020 PANK4Q9NVE7 773 aa13.93□□□□□ -0.18
CDX2-201ENST00000381020 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.93□□□□□ -0.18
CDX2-201ENST00000381020 PCDHB13Q9Y5F0 798 aa13.93□□□□□ -0.18
CDX2-201ENST00000381020 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.93□□□□□ -0.18
CDX2-201ENST00000381020 ZBTB7AO95365 584 aa13.92□□□□□ -0.18
CDX2-201ENST00000381020 MYCT1Q8N699 235 aa13.92□□□□□ -0.18
CDX2-201ENST00000381020 CHURC1Q8WUH1 139 aa13.92□□□□□ -0.18
CDX2-201ENST00000381020 AK8Q96MA6 479 aa13.92□□□□□ -0.18
CDX2-201ENST00000381020 ALS2CR12Q96Q35 445 aa13.92□□□□□ -0.18
CDX2-201ENST00000381020 NAP1L4Q99733 375 aaKnown RBP13.92□□□□□ -0.18
CDX2-201ENST00000381020 CENPHQ9H3R5 247 aa13.92□□□□□ -0.18
CDX2-201ENST00000381020 GOPCQ9HD26 462 aa13.92□□□□□ -0.18
CDX2-201ENST00000381020 ZHX1Q9UKY1 873 aaPredicted RBP13.92□□□□□ -0.18
CDX2-201ENST00000381020 STXBP4Q6ZWJ1 553 aa13.92□□□□□ -0.18
CDX2-201ENST00000381020 NT5C3AQ9H0P0 336 aa13.92□□□□□ -0.18
CDX2-201ENST00000381020 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.92□□□□□ -0.18
CDX2-201ENST00000381020 MAD2L2Q9UI95 211 aa13.92□□□□□ -0.18
CDX2-201ENST00000381020 HPSEQ9Y251 543 aa13.92□□□□□ -0.18
CDX2-201ENST00000381020 ZBTB5O15062 677 aa13.92□□□□□ -0.18
CDX2-201ENST00000381020 SORBS3O60504 671 aa13.92□□□□□ -0.18
CDX2-201ENST00000381020 GAS7O60861 476 aa13.92□□□□□ -0.18
CDX2-201ENST00000381020 PDHBP11177 359 aa13.92□□□□□ -0.18
CDX2-201ENST00000381020 QRICH1Q2TAL8 776 aa13.92□□□□□ -0.18
CDX2-201ENST00000381020 BPIFA3Q9BQP9 254 aa13.92□□□□□ -0.18
CDX2-201ENST00000381020 ARFGAP3Q9NP61 516 aa13.92□□□□□ -0.18
CDX2-201ENST00000381020 KCNQ5Q9NR82 932 aa13.92□□□□□ -0.18
CDX2-201ENST00000381020 ACTN4O43707 911 aaKnown RBP13.91□□□□□ -0.18
CDX2-201ENST00000381020 ACRBPQ8NEB7 543 aa13.91□□□□□ -0.18
CDX2-201ENST00000381020 P2RX5Q93086 422 aa13.91□□□□□ -0.18
CDX2-201ENST00000381020 PSDA5PKW4 1024 aaPredicted RBP13.91□□□□□ -0.18
CDX2-201ENST00000381020 TUBB4AP04350 444 aa13.91□□□□□ -0.18
CDX2-201ENST00000381020 DNM2P50570 870 aa13.91□□□□□ -0.18
CDX2-201ENST00000381020 PRPF4BQ13523 1007 aaKnown RBP13.91□□□□□ -0.18
CDX2-201ENST00000381020 ANKRD13CQ8N6S4 541 aa13.91□□□□□ -0.18
CDX2-201ENST00000381020 FAM205AQ6ZU69 1335 aa13.91□□□□□ -0.18
CDX2-201ENST00000381020 STXBP3O00186 592 aa13.91□□□□□ -0.18
CDX2-201ENST00000381020 PPP1R2P41236 205 aa13.91□□□□□ -0.18
CDX2-201ENST00000381020 TRIM14Q14142 442 aa13.91□□□□□ -0.18
CDX2-201ENST00000381020 TBC1D10BQ4KMP7 808 aaPredicted RBP13.91□□□□□ -0.18
CDX2-201ENST00000381020 TMED8Q6PL24 325 aaPredicted RBP13.91□□□□□ -0.18
CDX2-201ENST00000381020 TACC1O75410 805 aa13.9□□□□□ -0.18
CDX2-201ENST00000381020 SRGNP10124 158 aa13.9□□□□□ -0.18
CDX2-201ENST00000381020 RNASE9P60153 205 aaKnown RBP13.9□□□□□ -0.18
CDX2-201ENST00000381020 CCDC93Q567U6 631 aa13.9□□□□□ -0.18
CDX2-201ENST00000381020 ODF2Q5BJF6 829 aa13.9□□□□□ -0.18
CDX2-201ENST00000381020 GOLGA1Q92805 767 aa13.9□□□□□ -0.18
CDX2-201ENST00000381020 ANO3Q9BYT9 981 aa13.9□□□□□ -0.18
CDX2-201ENST00000381020 RWDD2AQ9UIY3 292 aa13.9□□□□□ -0.18
CDX2-201ENST00000381020 BMS1Q14692 1282 aaKnown RBP13.9□□□□□ -0.18
CDX2-201ENST00000381020 IQCEQ6IPM2 695 aa13.9□□□□□ -0.18
CDX2-201ENST00000381020 BICD1Q96G01 975 aa13.9□□□□□ -0.18
CDX2-201ENST00000381020 SPZ1Q9BXG8 430 aa13.9□□□□□ -0.18
CDX2-201ENST00000381020 ARHGEF35A5YM69 484 aa13.9□□□□□ -0.18
CDX2-201ENST00000381020 POLRMTO00411 1230 aaKnown RBP13.9□□□□□ -0.18
CDX2-201ENST00000381020 FCER1AP12319 257 aa13.9□□□□□ -0.18
CDX2-201ENST00000381020 SYDE2Q5VT97 1194 aa13.9□□□□□ -0.18
CDX2-201ENST00000381020 RCSD1Q6JBY9 416 aa13.9□□□□□ -0.18
CDX2-201ENST00000381020 TMEM179Q6ZVK1 233 aa13.9□□□□□ -0.18
CDX2-201ENST00000381020 CCDC84Q86UT8 332 aaPredicted RBP13.9□□□□□ -0.18
CDX2-201ENST00000381020 SPTLC3Q9NUV7 552 aa13.9□□□□□ -0.18
CDX2-201ENST00000381020 GCOM1H8Y6P7 765 aaPredicted RBP13.9□□□□□ -0.19
CDX2-201ENST00000381020 BACH1O14867 736 aa13.9□□□□□ -0.19
CDX2-201ENST00000381020 POLR2MP0CAP2 368 aa13.9□□□□□ -0.19
CDX2-201ENST00000381020 CETN1Q12798 172 aa13.9□□□□□ -0.19
CDX2-201ENST00000381020 EHBP1Q8NDI1 1231 aa13.9□□□□□ -0.19
CDX2-201ENST00000381020 JAKMIP2Q96AA8 810 aa13.9□□□□□ -0.19
CDX2-201ENST00000381020 HINFPQ9BQA5 517 aa13.9□□□□□ -0.19
CDX2-201ENST00000381020 EPN1Q9Y6I3 576 aaPredicted RBP13.9□□□□□ -0.19
CDX2-201ENST00000381020 FLOT1O75955 427 aa13.89□□□□□ -0.19
CDX2-201ENST00000381020 MTF1Q14872 753 aa13.89□□□□□ -0.19
CDX2-201ENST00000381020 SMCR8Q8TEV9 937 aaPredicted RBP13.89□□□□□ -0.19
CDX2-201ENST00000381020 ZNF384Q8TF68 577 aa13.89□□□□□ -0.19
CDX2-201ENST00000381020 NAPGQ99747 312 aaPredicted RBP13.89□□□□□ -0.19
CDX2-201ENST00000381020 SCN11AQ9UI33 1791 aa13.89□□□□□ -0.19
CDX2-201ENST00000381020 EIF3JO75822 258 aaKnown RBP13.89□□□□□ -0.19
CDX2-201ENST00000381020 STAT2P52630 851 aa13.89□□□□□ -0.19
CDX2-201ENST00000381020 CCZ1BP86790 482 aa13.89□□□□□ -0.19
CDX2-201ENST00000381020 CCZ1P86791 482 aaPredicted RBP13.89□□□□□ -0.19
CDX2-201ENST00000381020 ZNF543Q08ER8 600 aa13.89□□□□□ -0.19
CDX2-201ENST00000381020 TCP11X2Q5H9J9 407 aa13.89□□□□□ -0.19
CDX2-201ENST00000381020 TOGARAM2Q6ZUX3 1019 aa13.89□□□□□ -0.19
CDX2-201ENST00000381020 GTPBP4Q9BZE4 634 aaKnown RBP13.89□□□□□ -0.19
CDX2-201ENST00000381020 PICK1Q9NRD5 415 aa13.89□□□□□ -0.19
CDX2-201ENST00000381020 E9PMD0 336 aa13.89□□□□□ -0.19
CDX2-201ENST00000381020 RPL13P26373 211 aaKnown RBP13.89□□□□□ -0.19
CDX2-201ENST00000381020 TM4SF1P30408 202 aa13.89□□□□□ -0.19
CDX2-201ENST00000381020 DDX12PQ92771 950 aa13.89□□□□□ -0.19
CDX2-201ENST00000381020 CCPG1Q9ULG6 757 aa13.89□□□□□ -0.19
CDX2-201ENST00000381020 SFI1A8K8P3 1242 aa13.88□□□□□ -0.19
CDX2-201ENST00000381020 KRT13P13646 458 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms