RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 ZBTB12Q9Y330 459 aaPredicted RBP21.69■■□□□ 1.06
GMDS-201ENST00000380805 A0A1W2PRG0 241 aa21.68■■□□□ 1.06
GMDS-201ENST00000380805 CLRN2A0PK11 232 aa21.68■■□□□ 1.06
GMDS-201ENST00000380805 KLRC4O43908 158 aa21.68■■□□□ 1.06
GMDS-201ENST00000380805 TDP2O95551 362 aa21.68■■□□□ 1.06
GMDS-201ENST00000380805 BMP3P12645 472 aa21.68■■□□□ 1.06
GMDS-201ENST00000380805 SKILP12757 684 aa21.68■■□□□ 1.06
GMDS-201ENST00000380805 PLCG1P19174 1290 aa21.68■■□□□ 1.06
GMDS-201ENST00000380805 MAP3K10Q02779 954 aa21.68■■□□□ 1.06
GMDS-201ENST00000380805 AP3B2Q13367 1082 aa21.68■■□□□ 1.06
GMDS-201ENST00000380805 UBE2SQ16763 222 aa21.68■■□□□ 1.06
GMDS-201ENST00000380805 SAMSN1Q9NSI8 373 aaKnown RBP21.68■■□□□ 1.06
GMDS-201ENST00000380805 PCDHA1Q9Y5I3 950 aa21.68■■□□□ 1.06
GMDS-201ENST00000380805 SBF1O95248 1867 aa21.68■■□□□ 1.06
GMDS-201ENST00000380805 A0A1B0GTH6 734 aa21.67■■□□□ 1.06
GMDS-201ENST00000380805 RHOBTB3O94955 611 aa21.67■■□□□ 1.06
GMDS-201ENST00000380805 TNNI2P48788 182 aa21.67■■□□□ 1.06
GMDS-201ENST00000380805 CXCL9Q07325 125 aa21.67■■□□□ 1.06
GMDS-201ENST00000380805 MOXD1Q6UVY6 613 aa21.67■■□□□ 1.06
GMDS-201ENST00000380805 MBOAT7Q96N66 472 aa21.67■■□□□ 1.06
GMDS-201ENST00000380805 AMNQ9BXJ7 453 aa21.67■■□□□ 1.06
GMDS-201ENST00000380805 SFPQP23246 707 aaKnown RBP eCLIP21.66■■□□□ 1.069e-7■■□□□ 11.5
GMDS-201ENST00000380805 TECP42680 631 aa21.66■■□□□ 1.06
GMDS-201ENST00000380805 TBX2Q13207 712 aaPredicted RBP21.66■■□□□ 1.06
GMDS-201ENST00000380805 TMEM266Q2M3C6 531 aa21.66■■□□□ 1.06
GMDS-201ENST00000380805 SYDE2Q5VT97 1194 aa21.66■■□□□ 1.06
GMDS-201ENST00000380805 RASSF8Q8NHQ8 419 aa21.66■■□□□ 1.06
GMDS-201ENST00000380805 CRYGNQ8WXF5 182 aa21.66■■□□□ 1.06
GMDS-201ENST00000380805 C7orf25Q9BPX7 421 aa21.66■■□□□ 1.06
GMDS-201ENST00000380805 GTPBP4Q9BZE4 634 aaKnown RBP21.66■■□□□ 1.06
GMDS-201ENST00000380805 RAB34Q9BZG1 259 aa21.66■■□□□ 1.06
GMDS-201ENST00000380805 TMX2Q9Y320 296 aa21.66■■□□□ 1.06
GMDS-201ENST00000380805 R3HCC1Q9Y3T6 440 aaKnown RBP21.66■■□□□ 1.06
GMDS-201ENST00000380805 ATAD5Q96QE3 1844 aa21.66■■□□□ 1.06
GMDS-201ENST00000380805 CYP3A7-CYP3A51PA0A087WV96 503 aa21.66■■□□□ 1.06
GMDS-201ENST00000380805 TPM2P07951 284 aa21.66■■□□□ 1.06
GMDS-201ENST00000380805 CYP3A7P24462 503 aa21.66■■□□□ 1.06
GMDS-201ENST00000380805 USP11P51784 963 aa21.66■■□□□ 1.06
GMDS-201ENST00000380805 NR1I3Q14994 352 aa21.66■■□□□ 1.06
GMDS-201ENST00000380805 SMYD4Q8IYR2 804 aaPredicted RBP21.66■■□□□ 1.06
GMDS-201ENST00000380805 PRIMPOLQ96LW4 560 aa21.66■■□□□ 1.06
GMDS-201ENST00000380805 ARHGEF10LQ9HCE6 1279 aa21.66■■□□□ 1.06
GMDS-201ENST00000380805 STK17AQ9UEE5 414 aa21.66■■□□□ 1.06
GMDS-201ENST00000380805 ZBTB21Q9ULJ3 1066 aa21.66■■□□□ 1.06
GMDS-201ENST00000380805 TMEM232C9JQI7 657 aa21.65■■□□□ 1.06
GMDS-201ENST00000380805 PAK1Q13153 545 aa21.65■■□□□ 1.06
GMDS-201ENST00000380805 ADSSL1Q8N142 457 aa21.65■■□□□ 1.06
GMDS-201ENST00000380805 MEIS2O14770 477 aa21.64■■□□□ 1.06
GMDS-201ENST00000380805 SLC26A4O43511 780 aa21.64■■□□□ 1.06
GMDS-201ENST00000380805 LMNB1P20700 586 aa21.64■■□□□ 1.06
GMDS-201ENST00000380805 CDK11BP21127 795 aaKnown RBP21.64■■□□□ 1.06
GMDS-201ENST00000380805 TXKP42681 527 aa21.64■■□□□ 1.06
GMDS-201ENST00000380805 CIAPIN1Q6FI81 312 aa21.64■■□□□ 1.06
GMDS-201ENST00000380805 GIMAP8Q8ND71 665 aaPredicted RBP21.64■■□□□ 1.06
GMDS-201ENST00000380805 CCDC112Q8NEF3 446 aa21.64■■□□□ 1.06
GMDS-201ENST00000380805 CALML4Q96GE6 196 aa21.64■■□□□ 1.06
GMDS-201ENST00000380805 CTAGE1Q96RT6 745 aa21.64■■□□□ 1.06
GMDS-201ENST00000380805 TRIM9Q9C026 710 aa21.64■■□□□ 1.06
GMDS-201ENST00000380805 TMX1Q9H3N1 280 aa21.64■■□□□ 1.06
GMDS-201ENST00000380805 LRWD1Q9UFC0 647 aa21.64■■□□□ 1.06
GMDS-201ENST00000380805 DDX25Q9UHL0 483 aaKnown RBP21.64■■□□□ 1.06
GMDS-201ENST00000380805 CTNND2Q9UQB3 1225 aa21.64■■□□□ 1.06
GMDS-201ENST00000380805 GRB10Q13322 594 aa21.63■■□□□ 1.05
GMDS-201ENST00000380805 KMT5BQ4FZB7 885 aa21.63■■□□□ 1.05
GMDS-201ENST00000380805 COBLL1Q53SF7 1204 aa21.63■■□□□ 1.05
GMDS-201ENST00000380805 KLHL10Q6JEL2 608 aa21.63■■□□□ 1.05
GMDS-201ENST00000380805 FBXO11Q86XK2 927 aa21.63■■□□□ 1.05
GMDS-201ENST00000380805 HAS1Q92839 578 aa21.63■■□□□ 1.05
GMDS-201ENST00000380805 NUP88Q99567 741 aaPredicted RBP21.63■■□□□ 1.05
GMDS-201ENST00000380805 ANO3Q9BYT9 981 aa21.63■■□□□ 1.05
GMDS-201ENST00000380805 LRRC10BA6NIK2 292 aa21.63■■□□□ 1.05
GMDS-201ENST00000380805 PLA2G6O60733 806 aa21.63■■□□□ 1.05
GMDS-201ENST00000380805 ZNF280AP59817 542 aaPredicted RBP21.63■■□□□ 1.05
GMDS-201ENST00000380805 AMPD3Q01432 767 aa21.63■■□□□ 1.05
GMDS-201ENST00000380805 DNTTIP2Q5QJE6 756 aaKnown RBP21.63■■□□□ 1.05
GMDS-201ENST00000380805 CNNM4Q6P4Q7 775 aa21.63■■□□□ 1.05
GMDS-201ENST00000380805 PNMA5Q96PV4 448 aa21.63■■□□□ 1.05
GMDS-201ENST00000380805 ADD3Q9UEY8 706 aaKnown RBP21.63■■□□□ 1.05
GMDS-201ENST00000380805 WNT10BO00744 389 aa21.62■■□□□ 1.05
GMDS-201ENST00000380805 RAD21O60216 631 aa21.62■■□□□ 1.05
GMDS-201ENST00000380805 HOXA7P31268 230 aaPredicted RBP21.62■■□□□ 1.05
GMDS-201ENST00000380805 PBX1P40424 430 aa21.62■■□□□ 1.05
GMDS-201ENST00000380805 PRCPP42785 496 aa21.62■■□□□ 1.05
GMDS-201ENST00000380805 STX17P56962 302 aa21.62■■□□□ 1.05
GMDS-201ENST00000380805 SPAG1Q07617 926 aa21.62■■□□□ 1.05
GMDS-201ENST00000380805 TRAF1Q13077 416 aa21.62■■□□□ 1.05
GMDS-201ENST00000380805 TMEM119Q4V9L6 283 aa21.62■■□□□ 1.05
GMDS-201ENST00000380805 SPECC1LQ69YQ0 1117 aa21.62■■□□□ 1.05
GMDS-201ENST00000380805 GOPCQ9HD26 462 aa21.62■■□□□ 1.05
GMDS-201ENST00000380805 KCNMB3Q9NPA1 279 aa21.62■■□□□ 1.05
GMDS-201ENST00000380805 BLOC1S4Q9NUP1 217 aa21.62■■□□□ 1.05
GMDS-201ENST00000380805 LIMA1Q9UHB6 759 aaKnown RBP21.62■■□□□ 1.05
GMDS-201ENST00000380805 GDAQ9Y2T3 454 aa21.62■■□□□ 1.05
GMDS-201ENST00000380805 USP17L15C9J2P7 530 aa21.61■■□□□ 1.05
GMDS-201ENST00000380805 USP17L13C9JLJ4 530 aa21.61■■□□□ 1.05
GMDS-201ENST00000380805 USP17L11C9JVI0 530 aa21.61■■□□□ 1.05
GMDS-201ENST00000380805 USP17L18D6R9N7 530 aa21.61■■□□□ 1.05
GMDS-201ENST00000380805 USP17L22D6RA61 530 aa21.61■■□□□ 1.05
GMDS-201ENST00000380805 USP17L17D6RBQ6 530 aa21.61■■□□□ 1.05
GMDS-201ENST00000380805 USP17L19D6RCP7 530 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms