RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 CCDC51Q96ER9 411 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 DHTKD1Q96HY7 919 aaPredicted RBP14.17□□□□□ -0.14
VPS16-202ENST00000380445 PLIN2Q99541 437 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 DNAJC18Q9H819 358 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 PSTPIP2Q9H939 334 aa14.17□□□□□ -0.14
VPS16-202ENST00000380445 ZNF219Q9P2Y4 722 aaPredicted RBP14.17□□□□□ -0.14
VPS16-202ENST00000380445 TNS1Q9HBL0 1735 aaKnown RBP14.16□□□□□ -0.14
VPS16-202ENST00000380445 DDTLA6NHG4 134 aaPredicted RBP14.16□□□□□ -0.14
VPS16-202ENST00000380445 KCNJ18B7U540 433 aa14.16□□□□□ -0.14
VPS16-202ENST00000380445 EEF2P13639 858 aaKnown RBP14.16□□□□□ -0.14
VPS16-202ENST00000380445 HOXA7P31268 230 aaPredicted RBP14.16□□□□□ -0.14
VPS16-202ENST00000380445 CLK2P49760 499 aaKnown RBP14.16□□□□□ -0.14
VPS16-202ENST00000380445 CACNB3P54284 484 aa14.16□□□□□ -0.14
VPS16-202ENST00000380445 ETF1P62495 437 aaKnown RBP14.16□□□□□ -0.14
VPS16-202ENST00000380445 TRIM14Q14142 442 aa14.16□□□□□ -0.14
VPS16-202ENST00000380445 KCNJ12Q14500 433 aa14.16□□□□□ -0.14
VPS16-202ENST00000380445 KRT31Q15323 416 aa14.16□□□□□ -0.14
VPS16-202ENST00000380445 AOC3Q16853 763 aa14.16□□□□□ -0.14
VPS16-202ENST00000380445 ANKRD7Q92527 254 aa14.16□□□□□ -0.14
VPS16-202ENST00000380445 CDK5RAP3Q96JB5 506 aa14.16□□□□□ -0.14
VPS16-202ENST00000380445 TRIM9Q9C026 710 aa14.16□□□□□ -0.14
VPS16-202ENST00000380445 LRRC27Q9C0I9 530 aa14.16□□□□□ -0.14
VPS16-202ENST00000380445 EXOC1Q9NV70 894 aa14.16□□□□□ -0.14
VPS16-202ENST00000380445 BICDL2A1A5D9 508 aa14.16□□□□□ -0.14
VPS16-202ENST00000380445 TNNI2P48788 182 aa14.16□□□□□ -0.14
VPS16-202ENST00000380445 SLFN13Q68D06 897 aa14.16□□□□□ -0.14
VPS16-202ENST00000380445 MCTP2Q6DN12 878 aa14.16□□□□□ -0.14
VPS16-202ENST00000380445 SV2BQ7L1I2 683 aa14.16□□□□□ -0.14
VPS16-202ENST00000380445 ZFP91Q96JP5 570 aaPredicted RBP14.16□□□□□ -0.14
VPS16-202ENST00000380445 THAP9Q9H5L6 903 aa14.16□□□□□ -0.14
VPS16-202ENST00000380445 PPP2R2CQ9Y2T4 447 aa14.16□□□□□ -0.14
VPS16-202ENST00000380445 USP17L10C9JJH3 530 aa14.15□□□□□ -0.14
VPS16-202ENST00000380445 SLC16A2P36021 539 aa14.15□□□□□ -0.14
VPS16-202ENST00000380445 COPB1P53618 953 aaKnown RBP14.15□□□□□ -0.14
VPS16-202ENST00000380445 ICA1Q05084 483 aa14.15□□□□□ -0.14
VPS16-202ENST00000380445 GOLGA8FQ08AF8 430 aa14.15□□□□□ -0.14
VPS16-202ENST00000380445 GOLGA8DPQ0D2H9 430 aa14.15□□□□□ -0.14
VPS16-202ENST00000380445 MAPK8IP1Q9UQF2 711 aa14.15□□□□□ -0.14
VPS16-202ENST00000380445 PHLPP2Q6ZVD8 1323 aa14.15□□□□□ -0.14
VPS16-202ENST00000380445 PPP1R11O60927 126 aaPredicted RBP14.15□□□□□ -0.14
VPS16-202ENST00000380445 EEF1GP26641 437 aaKnown RBP14.15□□□□□ -0.14
VPS16-202ENST00000380445 ASIC1P78348 528 aa14.15□□□□□ -0.14
VPS16-202ENST00000380445 PDE4DQ08499 809 aa14.15□□□□□ -0.14
VPS16-202ENST00000380445 KRT79Q5XKE5 535 aa14.15□□□□□ -0.14
VPS16-202ENST00000380445 CNNM4Q6P4Q7 775 aa14.15□□□□□ -0.14
VPS16-202ENST00000380445 SYT10Q6XYQ8 523 aa14.15□□□□□ -0.14
VPS16-202ENST00000380445 MMTAG2Q9BU76 263 aaKnown RBP14.15□□□□□ -0.14
VPS16-202ENST00000380445 MAGEC2Q9UBF1 373 aaPredicted RBP14.15□□□□□ -0.14
VPS16-202ENST00000380445 ATRNL1Q5VV63 1379 aa14.14□□□□□ -0.15
VPS16-202ENST00000380445 SPDYE4A6NLX3 237 aa14.14□□□□□ -0.15
VPS16-202ENST00000380445 PPIP5K2O43314 1243 aa14.14□□□□□ -0.15
VPS16-202ENST00000380445 RAD21O60216 631 aa14.14□□□□□ -0.15
VPS16-202ENST00000380445 CCT6AP40227 531 aaKnown RBP14.14□□□□□ -0.15
VPS16-202ENST00000380445 RBL2Q08999 1139 aa14.14□□□□□ -0.15
VPS16-202ENST00000380445 ABCB5Q2M3G0 1257 aa14.14□□□□□ -0.15
VPS16-202ENST00000380445 REXO1L1PQ8IX06 675 aa14.14□□□□□ -0.15
VPS16-202ENST00000380445 SCN9AQ15858 1988 aa14.14□□□□□ -0.15
VPS16-202ENST00000380445 COL2A1P02458 1487 aaPredicted RBP14.14□□□□□ -0.15
VPS16-202ENST00000380445 MARCH6O60337 910 aa14.14□□□□□ -0.15
VPS16-202ENST00000380445 TDP2O95551 362 aa14.14□□□□□ -0.15
VPS16-202ENST00000380445 COBLL1Q53SF7 1204 aa14.14□□□□□ -0.15
VPS16-202ENST00000380445 SH3BP5LQ7L8J4 393 aa14.14□□□□□ -0.15
VPS16-202ENST00000380445 GMCL1P1Q8NEA9 526 aa14.14□□□□□ -0.15
VPS16-202ENST00000380445 TRIM47Q96LD4 638 aa14.14□□□□□ -0.15
VPS16-202ENST00000380445 TMOD2Q9NZR1 351 aa14.14□□□□□ -0.15
VPS16-202ENST00000380445 DDX25Q9UHL0 483 aaKnown RBP14.14□□□□□ -0.15
VPS16-202ENST00000380445 PCDHAC2Q9Y5I4 1007 aa14.14□□□□□ -0.15
VPS16-202ENST00000380445 SLC37A4O43826 429 aa14.13□□□□□ -0.15
VPS16-202ENST00000380445 SLU7O95391 586 aaKnown RBP14.13□□□□□ -0.15
VPS16-202ENST00000380445 NCBP1Q09161 790 aaKnown RBP14.13□□□□□ -0.15
VPS16-202ENST00000380445 RBM26Q5T8P6 1007 aaKnown RBP14.13□□□□□ -0.15
VPS16-202ENST00000380445 CREBRFQ8IUR6 639 aa14.13□□□□□ -0.15
VPS16-202ENST00000380445 FAM114A1Q8IWE2 563 aa14.13□□□□□ -0.15
VPS16-202ENST00000380445 PDCL2Q8N4E4 241 aa14.13□□□□□ -0.15
VPS16-202ENST00000380445 LARP4BQ92615 738 aaKnown RBP14.13□□□□□ -0.15
VPS16-202ENST00000380445 VPS16Q9H269 839 aa14.13□□□□□ -0.15
VPS16-202ENST00000380445 TDRD3Q9H7E2 651 aaKnown RBP14.13□□□□□ -0.15
VPS16-202ENST00000380445 SYNPO2Q9UMS6 1093 aa14.13□□□□□ -0.15
VPS16-202ENST00000380445 PCDHA1Q9Y5I3 950 aa14.13□□□□□ -0.15
VPS16-202ENST00000380445 PVALEFA0A1B0GWK0 134 aa14.13□□□□□ -0.15
VPS16-202ENST00000380445 MFAP3LO75121 409 aa14.13□□□□□ -0.15
VPS16-202ENST00000380445 CCNE1P24864 410 aa14.13□□□□□ -0.15
VPS16-202ENST00000380445 SEPT2Q15019 361 aa14.13□□□□□ -0.15
VPS16-202ENST00000380445 UBE2SQ16763 222 aa14.13□□□□□ -0.15
VPS16-202ENST00000380445 QRICH1Q2TAL8 776 aa14.13□□□□□ -0.15
VPS16-202ENST00000380445 ERO1AQ96HE7 468 aa14.13□□□□□ -0.15
VPS16-202ENST00000380445 GMCL1Q96IK5 515 aa14.13□□□□□ -0.15
VPS16-202ENST00000380445 L2HGDHQ9H9P8 463 aa14.13□□□□□ -0.15
VPS16-202ENST00000380445 SIPA1L1O43166 1804 aa14.13□□□□□ -0.15
VPS16-202ENST00000380445 FAM196BA6NMK8 535 aa14.12□□□□□ -0.15
VPS16-202ENST00000380445 F5H6K3 240 aa14.12□□□□□ -0.15
VPS16-202ENST00000380445 CCDC175P0C221 793 aa14.12□□□□□ -0.15
VPS16-202ENST00000380445 USP11P51784 963 aa14.12□□□□□ -0.15
VPS16-202ENST00000380445 KLRC3Q07444 240 aa14.12□□□□□ -0.15
VPS16-202ENST00000380445 ZNF771Q7L3S4 317 aaPredicted RBP14.12□□□□□ -0.15
VPS16-202ENST00000380445 LRRC15Q8TF66 581 aa14.12□□□□□ -0.15
VPS16-202ENST00000380445 TAB2Q9NYJ8 693 aa14.12□□□□□ -0.15
VPS16-202ENST00000380445 ATF5Q9Y2D1 282 aaPredicted RBP14.12□□□□□ -0.15
VPS16-202ENST00000380445 ZNF646O15015 1829 aaPredicted RBP14.12□□□□□ -0.15
VPS16-202ENST00000380445 SLC26A4O43511 780 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms