RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 CARD9Q9H257 536 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 TMED5Q9Y3A6 229 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 CFAP73A6NFT4 308 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 AKR1B10O60218 316 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 GIGYF1O75420 1035 aaPredicted RBP10.31□□□□□ -0.76
PTPRA-204ENST00000380393 BCRP11274 1271 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 NLRP12P59046 1061 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 NLRP5P59047 1200 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 ZNF268Q14587 947 aaPredicted RBP10.31□□□□□ -0.76
PTPRA-204ENST00000380393 FKBP15Q5T1M5 1219 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 ENGASEQ8NFI3 743 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 CAGE1Q8TC20 777 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 PPP1R12CQ9BZL4 782 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 TNS3Q68CZ2 1445 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 SRRM3A6NNA2 597 aaPredicted RBP10.31□□□□□ -0.76
PTPRA-204ENST00000380393 IKBKBO14920 756 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 TROVE2P10155 538 aaKnown RBP eCLIP10.31□□□□□ -0.76
PTPRA-204ENST00000380393 COL9A3Q14050 684 aaPredicted RBP10.31□□□□□ -0.76
PTPRA-204ENST00000380393 HSP90AA4PQ58FG1 418 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 KLHL10Q6JEL2 608 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 PPP1R42Q7Z4L9 355 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 TMCO5AQ8N6Q1 288 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 TSEN2Q8NCE0 465 aaKnown RBP10.31□□□□□ -0.76
PTPRA-204ENST00000380393 ZMAT2Q96NC0 199 aaKnown RBP10.31□□□□□ -0.76
PTPRA-204ENST00000380393 ANKRD27Q96NW4 1050 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 ZIM3Q96PE6 472 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 TUBA8Q9NY65 449 aaPredicted RBP10.31□□□□□ -0.76
PTPRA-204ENST00000380393 EFR3BQ9Y2G0 817 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 USH1CQ9Y6N9 552 aa10.31□□□□□ -0.76
PTPRA-204ENST00000380393 JAK2O60674 1132 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 PACS1Q6VY07 963 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 RAD9BQ6WBX8 426 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 WDR75Q8IWA0 830 aaKnown RBP10.3□□□□□ -0.76
PTPRA-204ENST00000380393 PEX5LQ8IYB4 626 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 WDR60Q8WVS4 1066 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 TESPA1A2RU30 521 aaPredicted RBP10.3□□□□□ -0.76
PTPRA-204ENST00000380393 CETN3O15182 167 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 ATP9BO43861 1147 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 ALADP13716 330 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 SERPINB4P48594 390 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 IFI16Q16666 785 aaKnown RBP10.3□□□□□ -0.76
PTPRA-204ENST00000380393 C3orf67Q6ZVT6 689 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 CPLX4Q7Z7G2 160 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 RHPN1Q8TCX5 695 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 SIL1Q9H173 461 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 RETREG1Q9H6L5 497 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 NFAT5O94916 1531 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 TRIM37O94972 964 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 SLC3A2P08195 630 aaKnown RBP10.3□□□□□ -0.76
PTPRA-204ENST00000380393 NFKBIAP25963 317 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 NEK2P51955 445 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 AMPD2Q01433 879 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 MYL5Q02045 173 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 FLIIQ13045 1269 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 TBX2Q13207 712 aaPredicted RBP10.3□□□□□ -0.76
PTPRA-204ENST00000380393 ITGA7Q13683 1181 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 SEPT2Q15019 361 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 SOGA3Q5TF21 947 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 RASIP1Q5U651 963 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 SPECC1LQ69YQ0 1117 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 ZNF554Q86TJ5 538 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 RUFY2Q8WXA3 655 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 EVI5LQ96CN4 794 aa10.3□□□□□ -0.76
PTPRA-204ENST00000380393 TRPM3Q9HCF6 1732 aaPredicted RBP10.29□□□□□ -0.76
PTPRA-204ENST00000380393 TPPPO94811 219 aa10.29□□□□□ -0.76
PTPRA-204ENST00000380393 CFAP58Q5T655 872 aa10.29□□□□□ -0.76
PTPRA-204ENST00000380393 PPP4R3AQ6IN85 833 aa10.29□□□□□ -0.76
PTPRA-204ENST00000380393 NAA16Q6N069 864 aaPredicted RBP10.29□□□□□ -0.76
PTPRA-204ENST00000380393 DDX12PQ92771 950 aa10.29□□□□□ -0.76
PTPRA-204ENST00000380393 HIC2Q96JB3 615 aa10.29□□□□□ -0.76
PTPRA-204ENST00000380393 GBP5Q96PP8 586 aa10.29□□□□□ -0.76
PTPRA-204ENST00000380393 LRRC2Q9BYS8 371 aa10.29□□□□□ -0.76
PTPRA-204ENST00000380393 HSD3B7Q9H2F3 369 aa10.29□□□□□ -0.76
PTPRA-204ENST00000380393 SUCLA2Q9P2R7 463 aaPredicted RBP10.29□□□□□ -0.76
PTPRA-204ENST00000380393 SCOCQ9UIL1 159 aa10.29□□□□□ -0.76
PTPRA-204ENST00000380393 KIF24Q5T7B8 1368 aa10.29□□□□□ -0.76
PTPRA-204ENST00000380393 GOLGA6L10A0A0M3HER8 536 aa10.29□□□□□ -0.76
PTPRA-204ENST00000380393 CCT8L1PA6NM43 557 aa10.29□□□□□ -0.76
PTPRA-204ENST00000380393 CHL1O00533 1208 aa10.29□□□□□ -0.76
PTPRA-204ENST00000380393 ALDH5A1P51649 535 aaPredicted RBP10.29□□□□□ -0.76
PTPRA-204ENST00000380393 GUCY2FP51841 1108 aa10.29□□□□□ -0.76
PTPRA-204ENST00000380393 ARPC4P59998 168 aa10.29□□□□□ -0.76
PTPRA-204ENST00000380393 MCL1Q07820 350 aa10.29□□□□□ -0.76
PTPRA-204ENST00000380393 RESTQ13127 1097 aa10.29□□□□□ -0.76
PTPRA-204ENST00000380393 KRT72Q14CN4 511 aa10.29□□□□□ -0.76
PTPRA-204ENST00000380393 BLOC1S2Q6QNY1 142 aa10.29□□□□□ -0.76
PTPRA-204ENST00000380393 SESTD1Q86VW0 696 aa10.29□□□□□ -0.76
PTPRA-204ENST00000380393 PANX2Q96RD6 677 aa10.29□□□□□ -0.76
PTPRA-204ENST00000380393 CIDEBQ9UHD4 219 aa10.29□□□□□ -0.76
PTPRA-204ENST00000380393 DAAM1Q9Y4D1 1078 aa10.29□□□□□ -0.76
PTPRA-204ENST00000380393 ENC1O14682 589 aa10.28□□□□□ -0.76
PTPRA-204ENST00000380393 PDE6CP51160 858 aa10.28□□□□□ -0.76
PTPRA-204ENST00000380393 BYSLQ13895 437 aaKnown RBP10.28□□□□□ -0.76
PTPRA-204ENST00000380393 GLE1Q53GS7 698 aaKnown RBP10.28□□□□□ -0.76
PTPRA-204ENST00000380393 FAM133BQ5BKY9 247 aaKnown RBP10.28□□□□□ -0.76
PTPRA-204ENST00000380393 FOXB2Q5VYV0 432 aa10.28□□□□□ -0.76
PTPRA-204ENST00000380393 CREB3L3Q68CJ9 461 aa10.28□□□□□ -0.76
PTPRA-204ENST00000380393 ARFGAP2Q8N6H7 521 aa10.28□□□□□ -0.76
PTPRA-204ENST00000380393 SREK1Q8WXA9 508 aaKnown RBP10.28□□□□□ -0.76
PTPRA-204ENST00000380393 SRPK1Q96SB4 655 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms