RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 A0A0U1RQJ8 604 aa8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 ESYT2A0FGR8 921 aa8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 DDTLA6NHG4 134 aaPredicted RBP8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 AKR1B15C9JRZ8 316 aaPredicted RBP8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 CASP14P31944 242 aa8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 FXR1P51114 621 aaKnown RBP eCLIP8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 UBE2SQ16763 222 aa8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 TCP11X2Q5H9J9 407 aa8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 PDCL2Q8N4E4 241 aa8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 ZNF526Q8TF50 670 aaPredicted RBP8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 ATRIPQ8WXE1 791 aa8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 EEF2KMTQ96G04 330 aa8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 RMND1Q9NWS8 449 aa8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 TAB2Q9NYJ8 693 aa8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 SWAP70Q9UH65 585 aa8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 LIMA1Q9UHB6 759 aaKnown RBP8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 LRRC10BA6NIK2 292 aa8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 KCNJ18B7U540 433 aa8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 USP17L10C9JJH3 530 aa8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 GYPCP04921 128 aa8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 CHRNA5P30532 468 aa8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 KCNJ12Q14500 433 aa8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 CCDC93Q567U6 631 aa8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 SH3BP5LQ7L8J4 393 aa8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 C2CD5Q86YS7 1000 aa8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 CNPY4Q8N129 248 aa8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 MTMR9Q96QG7 549 aa8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 CTAGE1Q96RT6 745 aa8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 L2HGDHQ9H9P8 463 aa8.96□□□□□ -0.98
PDLIM5-204ENST00000380176 N4BP3O15049 544 aa8.95□□□□□ -0.98
PDLIM5-204ENST00000380176 RHOBTB3O94955 611 aa8.95□□□□□ -0.98
PDLIM5-204ENST00000380176 ADCY7P51828 1080 aa8.95□□□□□ -0.98
PDLIM5-204ENST00000380176 RBM5P52756 815 aaKnown RBP eCLIP8.95□□□□□ -0.98
PDLIM5-204ENST00000380176 COPB1P53618 953 aaKnown RBP8.95□□□□□ -0.98
PDLIM5-204ENST00000380176 PPP4R3BQ5MIZ7 849 aa8.95□□□□□ -0.98
PDLIM5-204ENST00000380176 RAD9BQ6WBX8 426 aa8.95□□□□□ -0.98
PDLIM5-204ENST00000380176 PODNQ7Z5L7 613 aa8.95□□□□□ -0.98
PDLIM5-204ENST00000380176 FCHSD1Q86WN1 690 aa8.95□□□□□ -0.98
PDLIM5-204ENST00000380176 HPS3Q969F9 1004 aa8.95□□□□□ -0.98
PDLIM5-204ENST00000380176 GJA10Q969M2 543 aa8.95□□□□□ -0.98
PDLIM5-204ENST00000380176 AK8Q96MA6 479 aa8.95□□□□□ -0.98
PDLIM5-204ENST00000380176 ZDHHC15Q96MV8 337 aa8.95□□□□□ -0.98
PDLIM5-204ENST00000380176 FAM198AQ9UFP1 575 aa8.95□□□□□ -0.98
PDLIM5-204ENST00000380176 ARFGEF1Q9Y6D6 1849 aa8.95□□□□□ -0.98
PDLIM5-204ENST00000380176 UTRNP46939 3433 aa8.95□□□□□ -0.98
PDLIM5-204ENST00000380176 PNMA6FA0A0J9YX94 578 aa8.95□□□□□ -0.98
PDLIM5-204ENST00000380176 KCNB1Q14721 858 aa8.95□□□□□ -0.98
PDLIM5-204ENST00000380176 SYCP1Q15431 976 aa8.95□□□□□ -0.98
PDLIM5-204ENST00000380176 CCDC96Q2M329 555 aa8.95□□□□□ -0.98
PDLIM5-204ENST00000380176 FILIP1LQ4L180 1135 aa8.95□□□□□ -0.98
PDLIM5-204ENST00000380176 DACT2Q5SW24 774 aa8.95□□□□□ -0.98
PDLIM5-204ENST00000380176 GIMAP8Q8ND71 665 aaPredicted RBP8.95□□□□□ -0.98
PDLIM5-204ENST00000380176 TRIM9Q9C026 710 aa8.95□□□□□ -0.98
PDLIM5-204ENST00000380176 TMX4Q9H1E5 349 aaPredicted RBP8.95□□□□□ -0.98
PDLIM5-204ENST00000380176 ZSCAN12O43309 604 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 ECE2O60344 883 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 MFAP3LO75121 409 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 SLU7O95391 586 aaKnown RBP8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 HLA-DOAP06340 250 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 FCER1AP12319 257 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 STK4Q13043 487 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 PPFIBP1Q86W92 1011 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 PANX2Q96RD6 677 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 UIMC1Q96RL1 719 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 WDR24Q96S15 920 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 NUDT12Q9BQG2 462 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 MFRPQ9BY79 579 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 MRPL44Q9H9J2 332 aaKnown RBP8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 MYO3BQ8WXR4 1341 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 POTEMA6NI47 508 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 CCP110O43303 1012 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 TNNI2P48788 182 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 GRB10Q13322 594 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 ELF2Q15723 593 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 CALCRLQ16602 461 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 AOC3Q16853 763 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 SIAH1Q8IUQ4 282 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 SRRTQ9BXP5 876 aaKnown RBP8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 IRX2Q9BZI1 471 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 RIC8AQ9NPQ8 531 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 PRDM4Q9UKN5 801 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 PHLPP2Q6ZVD8 1323 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 SMCHD1A6NHR9 2005 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 H0YIN7 160 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 H7C1D1 291 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 hCG_1984214I3L0E3 225 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 NKRFO15226 690 aaKnown RBP eCLIP8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 EEF2P13639 858 aaKnown RBP8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 CLK2P49760 499 aaKnown RBP8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 STRIP1Q5VSL9 837 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 TTI2Q6NXR4 508 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 ZNF713Q8N859 430 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 ERO1AQ96HE7 468 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 PNMA5Q96PV4 448 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 CCDC94Q9BW85 323 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 BLOC1S4Q9NUP1 217 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 LRWD1Q9UFC0 647 aa8.94□□□□□ -0.98
PDLIM5-204ENST00000380176 ZBTB5O15062 677 aa8.93□□□□□ -0.98
PDLIM5-204ENST00000380176 MYL1P05976 194 aa8.93□□□□□ -0.98
PDLIM5-204ENST00000380176 JAG1P78504 1218 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms