RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 TRIM9Q9C026 710 aa9.73□□□□□ -0.85
TRIM6-203ENST00000380107 KANSL2Q9H9L4 492 aa9.73□□□□□ -0.85
TRIM6-203ENST00000380107 FLT1P17948 1338 aa9.73□□□□□ -0.85
TRIM6-203ENST00000380107 STXBP3O00186 592 aa9.73□□□□□ -0.85
TRIM6-203ENST00000380107 HIBADHP31937 336 aaKnown RBP9.73□□□□□ -0.85
TRIM6-203ENST00000380107 KIF5AQ12840 1032 aa9.73□□□□□ -0.85
TRIM6-203ENST00000380107 MEA1Q16626 185 aa9.73□□□□□ -0.85
TRIM6-203ENST00000380107 USP17L2Q6R6M4 530 aa9.73□□□□□ -0.85
TRIM6-203ENST00000380107 SND1Q7KZF4 910 aaKnown RBP eCLIP9.73□□□□□ -0.85
TRIM6-203ENST00000380107 FBXO33Q7Z6M2 555 aa9.73□□□□□ -0.85
TRIM6-203ENST00000380107 DZIP1Q86YF9 867 aaKnown RBP9.73□□□□□ -0.85
TRIM6-203ENST00000380107 GOLGA6L1Q8N7Z2 621 aa9.73□□□□□ -0.85
TRIM6-203ENST00000380107 KIAA0895Q8NCT3 520 aa9.73□□□□□ -0.85
TRIM6-203ENST00000380107 TGFBRAP1Q8WUH2 860 aa9.73□□□□□ -0.85
TRIM6-203ENST00000380107 SECISBP2LQ93073 1101 aaKnown RBP9.73□□□□□ -0.85
TRIM6-203ENST00000380107 CRACR2AQ9BSW2 395 aa9.73□□□□□ -0.85
TRIM6-203ENST00000380107 SEMA6BQ9H3T3 888 aa9.73□□□□□ -0.85
TRIM6-203ENST00000380107 MMRN2Q9H8L6 949 aa9.73□□□□□ -0.85
TRIM6-203ENST00000380107 TMEM260Q9NX78 707 aa9.73□□□□□ -0.85
TRIM6-203ENST00000380107 ARHGAP20Q9P2F6 1191 aa9.73□□□□□ -0.85
TRIM6-203ENST00000380107 SALL4Q9UJQ4 1053 aa9.73□□□□□ -0.85
TRIM6-203ENST00000380107 NUTM2BA6NNL0 878 aaPredicted RBP9.72□□□□□ -0.85
TRIM6-203ENST00000380107 NUTM2EB1AL46 878 aaPredicted RBP9.72□□□□□ -0.85
TRIM6-203ENST00000380107 EIF3CLB5ME19 914 aaKnown RBP9.72□□□□□ -0.85
TRIM6-203ENST00000380107 BUB1O43683 1085 aa9.72□□□□□ -0.85
TRIM6-203ENST00000380107 TSPY3P0CV98 308 aa9.72□□□□□ -0.85
TRIM6-203ENST00000380107 TSPY8P0CW00 308 aa9.72□□□□□ -0.85
TRIM6-203ENST00000380107 TXKP42681 527 aa9.72□□□□□ -0.85
TRIM6-203ENST00000380107 NAPAP54920 295 aa9.72□□□□□ -0.85
TRIM6-203ENST00000380107 ZBED6P86452 979 aa9.72□□□□□ -0.85
TRIM6-203ENST00000380107 APBA1Q02410 837 aa9.72□□□□□ -0.85
TRIM6-203ENST00000380107 KCNB1Q14721 858 aa9.72□□□□□ -0.85
TRIM6-203ENST00000380107 LRRC41Q15345 812 aa9.72□□□□□ -0.85
TRIM6-203ENST00000380107 ENOX2Q16206 610 aaKnown RBP9.72□□□□□ -0.85
TRIM6-203ENST00000380107 TBC1D9BQ66K14 1250 aa9.72□□□□□ -0.85
TRIM6-203ENST00000380107 CCNI2Q6ZMN8 369 aaPredicted RBP9.72□□□□□ -0.85
TRIM6-203ENST00000380107 MAPKAPK5Q8IW41 473 aa9.72□□□□□ -0.85
TRIM6-203ENST00000380107 SMARCC1Q92922 1105 aaPredicted RBP9.72□□□□□ -0.85
TRIM6-203ENST00000380107 MS4A14Q96JA4 679 aa9.72□□□□□ -0.85
TRIM6-203ENST00000380107 EIF3CQ99613 913 aaKnown RBP9.72□□□□□ -0.85
TRIM6-203ENST00000380107 PYM1Q9BRP8 204 aaKnown RBP9.72□□□□□ -0.85
TRIM6-203ENST00000380107 MED4Q9NPJ6 270 aa9.72□□□□□ -0.85
TRIM6-203ENST00000380107 BIN2Q9UBW5 565 aaPredicted RBP9.72□□□□□ -0.85
TRIM6-203ENST00000380107 SRP68Q9UHB9 627 aaKnown RBP9.72□□□□□ -0.85
TRIM6-203ENST00000380107 CCNE1P24864 410 aa9.72□□□□□ -0.85
TRIM6-203ENST00000380107 EIF4A3P38919 411 aaKnown RBP9.72□□□□□ -0.85
TRIM6-203ENST00000380107 RNASE9P60153 205 aaKnown RBP9.72□□□□□ -0.85
TRIM6-203ENST00000380107 CREG2Q8IUH2 290 aa9.72□□□□□ -0.85
TRIM6-203ENST00000380107 MARCH10Q8NA82 808 aaPredicted RBP9.72□□□□□ -0.85
TRIM6-203ENST00000380107 IFIH1Q9BYX4 1025 aaKnown RBP9.72□□□□□ -0.85
TRIM6-203ENST00000380107 UBA5Q9GZZ9 404 aa9.72□□□□□ -0.85
TRIM6-203ENST00000380107 ACBD3Q9H3P7 528 aa9.72□□□□□ -0.85
TRIM6-203ENST00000380107 ATP8A2Q9NTI2 1148 aa9.72□□□□□ -0.85
TRIM6-203ENST00000380107 ARPP21Q9UBL0 812 aaPredicted RBP9.72□□□□□ -0.85
TRIM6-203ENST00000380107 IVLP07476 585 aa9.71□□□□□ -0.85
TRIM6-203ENST00000380107 RPS8P62241 208 aaKnown RBP9.71□□□□□ -0.85
TRIM6-203ENST00000380107 GFPT1Q06210 699 aaPredicted RBP9.71□□□□□ -0.85
TRIM6-203ENST00000380107 SPA17Q15506 151 aa9.71□□□□□ -0.85
TRIM6-203ENST00000380107 DDB1Q16531 1140 aa9.71□□□□□ -0.85
TRIM6-203ENST00000380107 RRAGAQ7L523 313 aa9.71□□□□□ -0.85
TRIM6-203ENST00000380107 CERS3Q8IU89 383 aa9.71□□□□□ -0.85
TRIM6-203ENST00000380107 TMEM47Q9BQJ4 181 aa9.71□□□□□ -0.85
TRIM6-203ENST00000380107 MMTAG2Q9BU76 263 aaKnown RBP9.71□□□□□ -0.85
TRIM6-203ENST00000380107 CCSER1Q9C0I3 900 aa9.71□□□□□ -0.85
TRIM6-203ENST00000380107 DEF6Q9H4E7 631 aa9.71□□□□□ -0.85
TRIM6-203ENST00000380107 TCP11L1Q9NUJ3 509 aa9.71□□□□□ -0.85
TRIM6-203ENST00000380107 BARHL2Q9NY43 387 aa9.71□□□□□ -0.85
TRIM6-203ENST00000380107 PCDHA13Q9Y5I0 950 aa9.71□□□□□ -0.85
TRIM6-203ENST00000380107 ESYT3A0FGR9 886 aa9.71□□□□□ -0.86
TRIM6-203ENST00000380107 FAM170AA1A519 330 aa9.71□□□□□ -0.86
TRIM6-203ENST00000380107 GOLGA6BA6NDN3 693 aa9.71□□□□□ -0.86
TRIM6-203ENST00000380107 SMCO2A6NFE2 343 aa9.71□□□□□ -0.86
TRIM6-203ENST00000380107 ZSCAN5CA6NGD5 496 aaPredicted RBP9.71□□□□□ -0.86
TRIM6-203ENST00000380107 KLRF2D3W0D1 207 aa9.71□□□□□ -0.86
TRIM6-203ENST00000380107 OR52Z1P0C646 297 aa9.71□□□□□ -0.86
TRIM6-203ENST00000380107 AARSP49588 968 aaKnown RBP eCLIP9.71□□□□□ -0.86
TRIM6-203ENST00000380107 KIF11P52732 1056 aa9.71□□□□□ -0.86
TRIM6-203ENST00000380107 VAV2P52735 878 aa9.71□□□□□ -0.86
TRIM6-203ENST00000380107 NAP1L1P55209 391 aaKnown RBP9.71□□□□□ -0.86
TRIM6-203ENST00000380107 TUBB4BP68371 445 aa9.71□□□□□ -0.86
TRIM6-203ENST00000380107 CKAP4Q07065 602 aaKnown RBP9.71□□□□□ -0.86
TRIM6-203ENST00000380107 GRM4Q14833 912 aa9.71□□□□□ -0.86
TRIM6-203ENST00000380107 PTPROQ16827 1216 aa9.71□□□□□ -0.86
TRIM6-203ENST00000380107 MAP9Q49MG5 647 aa9.71□□□□□ -0.86
TRIM6-203ENST00000380107 C12orf60Q5U649 245 aa9.71□□□□□ -0.86
TRIM6-203ENST00000380107 DHTKD1Q96HY7 919 aaPredicted RBP9.71□□□□□ -0.86
TRIM6-203ENST00000380107 NLRC4Q9NPP4 1024 aa9.71□□□□□ -0.86
TRIM6-203ENST00000380107 POTEMA6NI47 508 aa9.7□□□□□ -0.86
TRIM6-203ENST00000380107 LRRC53A6NM62 1247 aa9.7□□□□□ -0.86
TRIM6-203ENST00000380107 AKR1B10O60218 316 aa9.7□□□□□ -0.86
TRIM6-203ENST00000380107 PCP11498 1178 aaKnown RBP9.7□□□□□ -0.86
TRIM6-203ENST00000380107 PTF1AQ7RTS3 328 aa9.7□□□□□ -0.86
TRIM6-203ENST00000380107 PACS2Q86VP3 889 aa9.7□□□□□ -0.86
TRIM6-203ENST00000380107 ZNF444Q8N0Y2 327 aaPredicted RBP9.7□□□□□ -0.86
TRIM6-203ENST00000380107 TSEN2Q8NCE0 465 aaKnown RBP9.7□□□□□ -0.86
TRIM6-203ENST00000380107 LINC00116Q8NCU8 138 aa9.7□□□□□ -0.86
TRIM6-203ENST00000380107 TBCKQ8TEA7 893 aa9.7□□□□□ -0.86
TRIM6-203ENST00000380107 NUDT12Q9BQG2 462 aa9.7□□□□□ -0.86
TRIM6-203ENST00000380107 TBC1D7Q9P0N9 293 aa9.7□□□□□ -0.86
TRIM6-203ENST00000380107 SNX12Q9UMY4 172 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms