RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 GCFC2P16383 781 aaKnown RBP11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 FXR2P51116 673 aaKnown RBP eCLIP11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 EIF6P56537 245 aaKnown RBP11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 AMPD3Q01432 767 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 PAK1Q13153 545 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 TBX2Q13207 712 aaPredicted RBP11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 STIM1Q13586 685 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 NR1I3Q14994 352 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 PTPN14Q15678 1187 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 AOC3Q16853 763 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 CCDC93Q567U6 631 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 SPECC1LQ69YQ0 1117 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 CYP4F22Q6NT55 531 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 TRMT44Q8IYL2 757 aaKnown RBP11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 RTKN2Q8IZC4 609 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 ANKRD20A12PQ8NF67 263 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 CUL5Q93034 780 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 CALML4Q96GE6 196 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 CAPNS2Q96L46 248 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 PSMD1Q99460 953 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 DNAJC18Q9H819 358 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 KCNQ5Q9NR82 932 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 KBTBD4Q9NVX7 518 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 BIN2Q9UBW5 565 aaPredicted RBP11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 DDTLA6NHG4 134 aaPredicted RBP11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 TRAF5O00463 557 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 PPIP5K2O43314 1243 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 SLC26A4O43511 780 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 CD44P16070 742 aaKnown RBP11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 CLK2P49760 499 aaKnown RBP11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 NAALADL2Q58DX5 795 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 JAKMIP3Q5VZ66 844 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 PPP4R3AQ6IN85 833 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 NYAP1Q6ZVC0 841 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 TEX2Q8IWB9 1127 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 ZSCAN29Q8IWY8 852 aaPredicted RBP11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 IGSF22Q8N9C0 903 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 GMCL1P1Q8NEA9 526 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 COA7Q96BR5 231 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 C16orf45Q96MC5 204 aaPredicted RBP11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 MED15Q96RN5 788 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 MTRQ99707 1265 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 BLZF1Q9H2G9 400 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 TMX1Q9H3N1 280 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 SAMSN1Q9NSI8 373 aaKnown RBP11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 TMOD2Q9NZR1 351 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 STK17AQ9UEE5 414 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 PDE4DIPQ5VU43 2346 aa11.79□□□□□ -0.52
POLR2J3-201ENST00000379340 AOC2O75106 756 aa11.78□□□□□ -0.52
POLR2J3-201ENST00000379340 RHOBTB3O94955 611 aa11.78□□□□□ -0.52
POLR2J3-201ENST00000379340 EEF2P13639 858 aaKnown RBP11.78□□□□□ -0.52
POLR2J3-201ENST00000379340 CASP1P29466 404 aa11.78□□□□□ -0.52
POLR2J3-201ENST00000379340 ATP2B2Q01814 1243 aa11.78□□□□□ -0.52
POLR2J3-201ENST00000379340 PDIA5Q14554 519 aa11.78□□□□□ -0.52
POLR2J3-201ENST00000379340 CALCRLQ16602 461 aa11.78□□□□□ -0.52
POLR2J3-201ENST00000379340 CST9Q5W186 159 aa11.78□□□□□ -0.52
POLR2J3-201ENST00000379340 CEP135Q66GS9 1140 aa11.78□□□□□ -0.52
POLR2J3-201ENST00000379340 SLFN13Q68D06 897 aa11.78□□□□□ -0.52
POLR2J3-201ENST00000379340 KLHL10Q6JEL2 608 aa11.78□□□□□ -0.52
POLR2J3-201ENST00000379340 PAXIP1Q6ZW49 1069 aaPredicted RBP11.78□□□□□ -0.52
POLR2J3-201ENST00000379340 CLEC10AQ8IUN9 316 aa11.78□□□□□ -0.52
POLR2J3-201ENST00000379340 ZFPM1Q8IX07 1006 aa11.78□□□□□ -0.52
POLR2J3-201ENST00000379340 NOC3LQ8WTT2 800 aaKnown RBP11.78□□□□□ -0.52
POLR2J3-201ENST00000379340 MTMR9Q96QG7 549 aa11.78□□□□□ -0.52
POLR2J3-201ENST00000379340 LRRC27Q9C0I9 530 aa11.78□□□□□ -0.52
POLR2J3-201ENST00000379340 MCOLN1Q9GZU1 580 aa11.78□□□□□ -0.52
POLR2J3-201ENST00000379340 INTS13Q9NVM9 706 aa11.78□□□□□ -0.52
POLR2J3-201ENST00000379340 LIMA1Q9UHB6 759 aaKnown RBP11.78□□□□□ -0.52
POLR2J3-201ENST00000379340 HERC5Q9UII4 1024 aaKnown RBP11.78□□□□□ -0.52
POLR2J3-201ENST00000379340 HDAC9Q9UKV0 1011 aa11.78□□□□□ -0.52
POLR2J3-201ENST00000379340 CTNND2Q9UQB3 1225 aa11.78□□□□□ -0.52
POLR2J3-201ENST00000379340 TMEM232C9JQI7 657 aa11.77□□□□□ -0.53
POLR2J3-201ENST00000379340 H7C1D1 291 aa11.77□□□□□ -0.53
POLR2J3-201ENST00000379340 FZD9O00144 591 aa11.77□□□□□ -0.53
POLR2J3-201ENST00000379340 ARHGAP6O43182 974 aa11.77□□□□□ -0.53
POLR2J3-201ENST00000379340 SLC1A4P43007 532 aa11.77□□□□□ -0.53
POLR2J3-201ENST00000379340 ICA1Q05084 483 aa11.77□□□□□ -0.53
POLR2J3-201ENST00000379340 TCP10Q12799 353 aa11.77□□□□□ -0.53
POLR2J3-201ENST00000379340 ABCB5Q2M3G0 1257 aa11.77□□□□□ -0.53
POLR2J3-201ENST00000379340 COBLL1Q53SF7 1204 aa11.77□□□□□ -0.53
POLR2J3-201ENST00000379340 SH3BP5LQ7L8J4 393 aa11.77□□□□□ -0.53
POLR2J3-201ENST00000379340 MTERF4Q7Z6M4 381 aaKnown RBP11.77□□□□□ -0.53
POLR2J3-201ENST00000379340 STAMQ92783 540 aa11.77□□□□□ -0.53
POLR2J3-201ENST00000379340 GMCL1Q96IK5 515 aa11.77□□□□□ -0.53
POLR2J3-201ENST00000379340 C7orf25Q9BPX7 421 aa11.77□□□□□ -0.53
POLR2J3-201ENST00000379340 TMEM260Q9NX78 707 aa11.77□□□□□ -0.53
POLR2J3-201ENST00000379340 ITIH6Q6UXX5 1313 aa11.77□□□□□ -0.53
POLR2J3-201ENST00000379340 TNRC18O15417 2968 aaPredicted RBP11.77□□□□□ -0.53
POLR2J3-201ENST00000379340 GOLGA6L9A6NEM1 432 aa11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 LRRC10BA6NIK2 292 aa11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 USP17L10C9JJH3 530 aa11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 PSMA7O14818 248 aa11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 ZSCAN12O43309 604 aa11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 KLRC4O43908 158 aa11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 STX10O60499 249 aa11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 PLCG1P19174 1290 aa11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 STX17P56962 302 aa11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 TRAF1Q13077 416 aa11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 AP3B2Q13367 1082 aa11.76□□□□□ -0.53
POLR2J3-201ENST00000379340 RBM26Q5T8P6 1007 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms