RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 FBXO11Q86XK2 927 aa28.74■■■□□ 2.19
TNFRSF4-201ENST00000379236 MORC4Q8TE76 937 aa28.74■■■□□ 2.19
TNFRSF4-201ENST00000379236 PDGFCQ9NRA1 345 aa28.74■■■□□ 2.19
TNFRSF4-201ENST00000379236 ELP1O95163 1332 aa28.73■■■□□ 2.19
TNFRSF4-201ENST00000379236 KLRF2D3W0D1 207 aa28.73■■■□□ 2.19
TNFRSF4-201ENST00000379236 IRX5P78411 483 aaPredicted RBP28.73■■■□□ 2.19
TNFRSF4-201ENST00000379236 BEX3Q00994 111 aa28.73■■■□□ 2.19
TNFRSF4-201ENST00000379236 TAPT1Q6NXT6 567 aa28.73■■■□□ 2.19
TNFRSF4-201ENST00000379236 MCF2L2Q86YR7 1114 aa28.73■■■□□ 2.19
TNFRSF4-201ENST00000379236 DNERQ8NFT8 737 aa28.73■■■□□ 2.19
TNFRSF4-201ENST00000379236 MRPL11Q9Y3B7 192 aaKnown RBP28.73■■■□□ 2.19
TNFRSF4-201ENST00000379236 A0A0U1RQG5 324 aaPredicted RBP28.72■■■□□ 2.19
TNFRSF4-201ENST00000379236 DYNC1LI2O43237 492 aaPredicted RBP28.72■■■□□ 2.19
TNFRSF4-201ENST00000379236 SMPD1P17405 629 aa28.72■■■□□ 2.19
TNFRSF4-201ENST00000379236 RGS22Q8NE09 1264 aa28.72■■■□□ 2.19
TNFRSF4-201ENST00000379236 JMJD4Q9H9V9 463 aa28.72■■■□□ 2.19
TNFRSF4-201ENST00000379236 GNEQ9Y223 722 aaKnown RBP28.72■■■□□ 2.19
TNFRSF4-201ENST00000379236 FSCN1Q16658 493 aaKnown RBP28.71■■■□□ 2.19
TNFRSF4-201ENST00000379236 TMEM67Q5HYA8 995 aa28.71■■■□□ 2.19
TNFRSF4-201ENST00000379236 CHST3Q7LGC8 479 aa28.71■■■□□ 2.19
TNFRSF4-201ENST00000379236 SH3RF1Q7Z6J0 888 aa28.71■■■□□ 2.19
TNFRSF4-201ENST00000379236 STAG2Q8N3U4 1231 aa28.71■■■□□ 2.19
TNFRSF4-201ENST00000379236 ESYT1Q9BSJ8 1104 aa28.71■■■□□ 2.19
TNFRSF4-201ENST00000379236 MAF1Q9H063 256 aa28.71■■■□□ 2.19
TNFRSF4-201ENST00000379236 TMEM39AQ9NV64 488 aa28.71■■■□□ 2.19
TNFRSF4-201ENST00000379236 Q9Y3F1 56 aa28.71■■■□□ 2.19
TNFRSF4-201ENST00000379236 SOX1O00570 391 aaPredicted RBP28.7■■■□□ 2.18
TNFRSF4-201ENST00000379236 RAG1P15918 1043 aa28.7■■■□□ 2.18
TNFRSF4-201ENST00000379236 LRIT3Q3SXY7 679 aa28.7■■■□□ 2.18
TNFRSF4-201ENST00000379236 CATIPQ7Z7H3 387 aa28.7■■■□□ 2.18
TNFRSF4-201ENST00000379236 BADQ92934 168 aa28.7■■■□□ 2.18
TNFRSF4-201ENST00000379236 LRCH3Q96II8 777 aa28.7■■■□□ 2.18
TNFRSF4-201ENST00000379236 TOX2Q96NM4 488 aa28.7■■■□□ 2.18
TNFRSF4-201ENST00000379236 AMNQ9BXJ7 453 aa28.7■■■□□ 2.18
TNFRSF4-201ENST00000379236 WDR11Q9BZH6 1224 aa28.7■■■□□ 2.18
TNFRSF4-201ENST00000379236 MAD2L2Q9UI95 211 aa28.7■■■□□ 2.18
TNFRSF4-201ENST00000379236 TAF6LQ9Y6J9 622 aa28.7■■■□□ 2.18
TNFRSF4-201ENST00000379236 KIAA1217Q5T5P2 1943 aa28.69■■■□□ 2.18
TNFRSF4-201ENST00000379236 TRIM43BA6NCK2 446 aa28.69■■■□□ 2.18
TNFRSF4-201ENST00000379236 CABYRO75952 493 aa28.69■■■□□ 2.18
TNFRSF4-201ENST00000379236 NKX3-2P78367 333 aa28.69■■■□□ 2.18
TNFRSF4-201ENST00000379236 BMP2KLQ5H9B9 411 aa28.69■■■□□ 2.18
TNFRSF4-201ENST00000379236 CASC1Q6TDU7 716 aa28.69■■■□□ 2.18
TNFRSF4-201ENST00000379236 STOX1Q6ZVD7 989 aa28.69■■■□□ 2.18
TNFRSF4-201ENST00000379236 ANKRD33Q7Z3H0 272 aa28.69■■■□□ 2.18
TNFRSF4-201ENST00000379236 TRIM43Q96BQ3 446 aaPredicted RBP28.69■■■□□ 2.18
TNFRSF4-201ENST00000379236 ANO2Q9NQ90 1003 aa28.69■■■□□ 2.18
TNFRSF4-201ENST00000379236 TLR3O15455 904 aaKnown RBP28.68■■■□□ 2.18
TNFRSF4-201ENST00000379236 GRM4Q14833 912 aa28.68■■■□□ 2.18
TNFRSF4-201ENST00000379236 DUSP28Q4G0W2 176 aa28.68■■■□□ 2.18
TNFRSF4-201ENST00000379236 BAZ2BQ9UIF8 2168 aaKnown RBP28.68■■■□□ 2.18
TNFRSF4-201ENST00000379236 SZT2Q5T011 3432 aa28.68■■■□□ 2.18
TNFRSF4-201ENST00000379236 ARVCFO00192 962 aa28.67■■■□□ 2.18
TNFRSF4-201ENST00000379236 TRAF1Q13077 416 aa28.67■■■□□ 2.18
TNFRSF4-201ENST00000379236 PPP2R5BQ15173 497 aa28.67■■■□□ 2.18
TNFRSF4-201ENST00000379236 CXCL17Q6UXB2 119 aa28.67■■■□□ 2.18
TNFRSF4-201ENST00000379236 HOMER1Q86YM7 354 aa28.67■■■□□ 2.18
TNFRSF4-201ENST00000379236 LSG1Q9H089 658 aaKnown RBP28.67■■■□□ 2.18
TNFRSF4-201ENST00000379236 PALM3A6NDB9 673 aaPredicted RBP28.66■■■□□ 2.18
TNFRSF4-201ENST00000379236 ZBTB5O15062 677 aa28.66■■■□□ 2.18
TNFRSF4-201ENST00000379236 KIAA0355O15063 1070 aa28.66■■■□□ 2.18
TNFRSF4-201ENST00000379236 CTAGE5O15320 804 aa28.66■■■□□ 2.18
TNFRSF4-201ENST00000379236 FAAP100Q0VG06 881 aa28.66■■■□□ 2.18
TNFRSF4-201ENST00000379236 BRDTQ58F21 947 aaPredicted RBP28.66■■■□□ 2.18
TNFRSF4-201ENST00000379236 MB21D2Q8IYB1 491 aaPredicted RBP28.66■■■□□ 2.18
TNFRSF4-201ENST00000379236 SCFD2Q8WU76 684 aa28.66■■■□□ 2.18
TNFRSF4-201ENST00000379236 CCDC136Q96JN2 1154 aa28.66■■■□□ 2.18
TNFRSF4-201ENST00000379236 CFBP00751 764 aa28.65■■■□□ 2.18
TNFRSF4-201ENST00000379236 CPT1AP50416 773 aa28.65■■■□□ 2.18
TNFRSF4-201ENST00000379236 SKAP1Q86WV1 359 aa28.65■■■□□ 2.18
TNFRSF4-201ENST00000379236 OR6J1Q8NGC5 347 aa28.65■■■□□ 2.18
TNFRSF4-201ENST00000379236 SYTL5Q8TDW5 730 aaPredicted RBP28.65■■■□□ 2.18
TNFRSF4-201ENST00000379236 NSUN6Q8TEA1 469 aaKnown RBP28.65■■■□□ 2.18
TNFRSF4-201ENST00000379236 LAMA3Q16787 3333 aa28.64■■■□□ 2.18
TNFRSF4-201ENST00000379236 NKRFO15226 690 aaKnown RBP eCLIP28.64■■■□□ 2.18
TNFRSF4-201ENST00000379236 PTGS1P23219 599 aa28.64■■■□□ 2.18
TNFRSF4-201ENST00000379236 EDNRBP24530 442 aa28.64■■■□□ 2.18
TNFRSF4-201ENST00000379236 MCM5P33992 734 aa28.64■■■□□ 2.18
TNFRSF4-201ENST00000379236 ARHGEF16Q5VV41 709 aa28.64■■■□□ 2.18
TNFRSF4-201ENST00000379236 NFXL1Q6ZNB6 911 aa28.64■■■□□ 2.18
TNFRSF4-201ENST00000379236 TBC1D5Q92609 795 aa28.64■■■□□ 2.18
TNFRSF4-201ENST00000379236 RMDN3Q96TC7 470 aa28.64■■■□□ 2.18
TNFRSF4-201ENST00000379236 SENP2Q9HC62 589 aa28.64■■■□□ 2.18
TNFRSF4-201ENST00000379236 PCDHA1Q9Y5I3 950 aa28.64■■■□□ 2.18
TNFRSF4-201ENST00000379236 RBM47A0AV96 593 aaKnown RBP28.63■■■□□ 2.17
TNFRSF4-201ENST00000379236 SLC27A2O14975 620 aa28.63■■■□□ 2.17
TNFRSF4-201ENST00000379236 PRC1O43663 620 aa28.63■■■□□ 2.17
TNFRSF4-201ENST00000379236 ANTXR2P58335 489 aa28.63■■■□□ 2.17
TNFRSF4-201ENST00000379236 TTLL4Q14679 1199 aa28.63■■■□□ 2.17
TNFRSF4-201ENST00000379236 TMEM63BQ5T3F8 832 aa28.63■■■□□ 2.17
TNFRSF4-201ENST00000379236 CTCFLQ8NI51 663 aaPredicted RBP28.63■■■□□ 2.17
TNFRSF4-201ENST00000379236 TAAR1Q96RJ0 339 aa28.63■■■□□ 2.17
TNFRSF4-201ENST00000379236 GPHNQ9NQX3 736 aaPredicted RBP28.63■■■□□ 2.17
TNFRSF4-201ENST00000379236 POLR3EQ9NVU0 708 aa28.63■■■□□ 2.17
TNFRSF4-201ENST00000379236 CDK7P50613 346 aa28.62■■■□□ 2.17
TNFRSF4-201ENST00000379236 FPGSQ05932 587 aa28.62■■■□□ 2.17
TNFRSF4-201ENST00000379236 ITGA7Q13683 1181 aa28.62■■■□□ 2.17
TNFRSF4-201ENST00000379236 RNF20Q5VTR2 975 aa28.62■■■□□ 2.17
TNFRSF4-201ENST00000379236 CREB3L3Q68CJ9 461 aa28.62■■■□□ 2.17
TNFRSF4-201ENST00000379236 GPR153Q6NV75 609 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms