RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 TNKSO95271 1327 aa22.12■■□□□ 1.13
TMEM88B-201ENST00000378821 A0A0U1RQG5 324 aaPredicted RBP22.12■■□□□ 1.13
TMEM88B-201ENST00000378821 GOLGA8HP0CJ92 632 aa22.12■■□□□ 1.13
TMEM88B-201ENST00000378821 EDNRBP24530 442 aa22.12■■□□□ 1.13
TMEM88B-201ENST00000378821 RPS6P62753 249 aaKnown RBP22.12■■□□□ 1.13
TMEM88B-201ENST00000378821 SEC23AQ15436 765 aa22.12■■□□□ 1.13
TMEM88B-201ENST00000378821 C9orf50Q5SZB4 431 aa22.12■■□□□ 1.13
TMEM88B-201ENST00000378821 SLC30A10Q6XR72 485 aa22.12■■□□□ 1.13
TMEM88B-201ENST00000378821 RNF207Q6ZRF8 634 aa22.12■■□□□ 1.13
TMEM88B-201ENST00000378821 FBXO16Q8IX29 292 aaPredicted RBP22.12■■□□□ 1.13
TMEM88B-201ENST00000378821 DNERQ8NFT8 737 aa22.12■■□□□ 1.13
TMEM88B-201ENST00000378821 ESYT1Q9BSJ8 1104 aa22.12■■□□□ 1.13
TMEM88B-201ENST00000378821 COL6A3P12111 3177 aa22.11■■□□□ 1.13
TMEM88B-201ENST00000378821 PTPDC1A2A3K4 754 aa22.11■■□□□ 1.13
TMEM88B-201ENST00000378821 CABYRO75952 493 aa22.11■■□□□ 1.13
TMEM88B-201ENST00000378821 RAG1P15918 1043 aa22.11■■□□□ 1.13
TMEM88B-201ENST00000378821 BEX3Q00994 111 aa22.11■■□□□ 1.13
TMEM88B-201ENST00000378821 FSCN1Q16658 493 aaKnown RBP22.11■■□□□ 1.13
TMEM88B-201ENST00000378821 DUSP28Q4G0W2 176 aa22.11■■□□□ 1.13
TMEM88B-201ENST00000378821 TMEM63BQ5T3F8 832 aa22.11■■□□□ 1.13
TMEM88B-201ENST00000378821 FAM126BQ8IXS8 530 aa22.11■■□□□ 1.13
TMEM88B-201ENST00000378821 SEZ6LQ9BYH1 1024 aa22.11■■□□□ 1.13
TMEM88B-201ENST00000378821 UBA5Q9GZZ9 404 aa22.11■■□□□ 1.13
TMEM88B-201ENST00000378821 DYNC1LI2O43237 492 aaPredicted RBP22.1■■□□□ 1.13
TMEM88B-201ENST00000378821 TIMP1P01033 207 aa22.1■■□□□ 1.13
TMEM88B-201ENST00000378821 CD4P01730 458 aa22.1■■□□□ 1.13
TMEM88B-201ENST00000378821 EPHB4P54760 987 aa22.1■■□□□ 1.13
TMEM88B-201ENST00000378821 Q7L0L9 218 aa22.1■■□□□ 1.13
TMEM88B-201ENST00000378821 EEPD1Q7L9B9 569 aa22.1■■□□□ 1.13
TMEM88B-201ENST00000378821 ADGRF4Q8IZF3 695 aa22.1■■□□□ 1.13
TMEM88B-201ENST00000378821 AP5M1Q9H0R1 490 aa22.1■■□□□ 1.13
TMEM88B-201ENST00000378821 CPVLQ9H3G5 476 aa22.1■■□□□ 1.13
TMEM88B-201ENST00000378821 CDC37Q16543 378 aaPredicted RBP22.09■■□□□ 1.13
TMEM88B-201ENST00000378821 KIAA1211Q6ZU35 1233 aa22.09■■□□□ 1.13
TMEM88B-201ENST00000378821 NOL8Q76FK4 1167 aaKnown RBP22.09■■□□□ 1.13
TMEM88B-201ENST00000378821 UBAC1Q9BSL1 405 aa22.09■■□□□ 1.13
TMEM88B-201ENST00000378821 GRIN2DO15399 1336 aa22.08■■□□□ 1.13
TMEM88B-201ENST00000378821 CDC45O75419 566 aa22.08■■□□□ 1.13
TMEM88B-201ENST00000378821 CYP21A2P08686 494 aa22.08■■□□□ 1.13
TMEM88B-201ENST00000378821 PARP1P09874 1014 aaKnown RBP22.08■■□□□ 1.13
TMEM88B-201ENST00000378821 PTGS1P23219 599 aa22.08■■□□□ 1.13
TMEM88B-201ENST00000378821 CALML3P27482 149 aa22.08■■□□□ 1.13
TMEM88B-201ENST00000378821 CXCL17Q6UXB2 119 aa22.08■■□□□ 1.13
TMEM88B-201ENST00000378821 CYB5R4Q7L1T6 521 aa22.08■■□□□ 1.13
TMEM88B-201ENST00000378821 MTMR8Q96EF0 704 aa22.08■■□□□ 1.13
TMEM88B-201ENST00000378821 WDR11Q9BZH6 1224 aa22.08■■□□□ 1.13
TMEM88B-201ENST00000378821 LSG1Q9H089 658 aaKnown RBP22.08■■□□□ 1.13
TMEM88B-201ENST00000378821 U3KPZ7 1027 aaPredicted RBP22.08■■□□□ 1.13
TMEM88B-201ENST00000378821 MYH6P13533 1939 aa22.08■■□□□ 1.12
TMEM88B-201ENST00000378821 ABCB11O95342 1321 aa22.07■■□□□ 1.12
TMEM88B-201ENST00000378821 ZEB2O60315 1214 aa22.07■■□□□ 1.12
TMEM88B-201ENST00000378821 SMAD3P84022 425 aaKnown RBP22.07■■□□□ 1.12
TMEM88B-201ENST00000378821 FPGSQ05932 587 aa22.07■■□□□ 1.12
TMEM88B-201ENST00000378821 MFSD5Q6N075 450 aa22.07■■□□□ 1.12
TMEM88B-201ENST00000378821 MAP4K1Q92918 833 aa22.07■■□□□ 1.12
TMEM88B-201ENST00000378821 VTI1AQ96AJ9 217 aa22.07■■□□□ 1.12
TMEM88B-201ENST00000378821 JMJD4Q9H9V9 463 aa22.07■■□□□ 1.12
TMEM88B-201ENST00000378821 STXBP5LQ9Y2K9 1186 aa22.07■■□□□ 1.12
TMEM88B-201ENST00000378821 ITGA7Q13683 1181 aa22.06■■□□□ 1.12
TMEM88B-201ENST00000378821 IFIT1BQ5T764 474 aaKnown RBP22.06■■□□□ 1.12
TMEM88B-201ENST00000378821 MPHOSPH6Q99547 160 aaKnown RBP22.06■■□□□ 1.12
TMEM88B-201ENST00000378821 RBM8AQ9Y5S9 174 aaKnown RBP22.06■■□□□ 1.12
TMEM88B-201ENST00000378821 PALM3A6NDB9 673 aaPredicted RBP22.05■■□□□ 1.12
TMEM88B-201ENST00000378821 B4DLN1 442 aa22.05■■□□□ 1.12
TMEM88B-201ENST00000378821 NKRFO15226 690 aaKnown RBP eCLIP22.05■■□□□ 1.12
TMEM88B-201ENST00000378821 MRPL12P52815 198 aaKnown RBP22.05■■□□□ 1.12
TMEM88B-201ENST00000378821 GHRHRQ02643 423 aa22.05■■□□□ 1.12
TMEM88B-201ENST00000378821 QRICH1Q2TAL8 776 aa22.05■■□□□ 1.12
TMEM88B-201ENST00000378821 USH1GQ495M9 461 aa22.05■■□□□ 1.12
TMEM88B-201ENST00000378821 STAG2Q8N3U4 1231 aa22.05■■□□□ 1.12
TMEM88B-201ENST00000378821 TBC1D5Q92609 795 aa22.05■■□□□ 1.12
TMEM88B-201ENST00000378821 TAF6LQ9Y6J9 622 aa22.05■■□□□ 1.12
TMEM88B-201ENST00000378821 TLR3O15455 904 aaKnown RBP22.04■■□□□ 1.12
TMEM88B-201ENST00000378821 PDE4DQ08499 809 aa22.04■■□□□ 1.12
TMEM88B-201ENST00000378821 TRDNQ13061 729 aa22.04■■□□□ 1.12
TMEM88B-201ENST00000378821 MCF2L2Q86YR7 1114 aa22.04■■□□□ 1.12
TMEM88B-201ENST00000378821 SCFD2Q8WU76 684 aa22.04■■□□□ 1.12
TMEM88B-201ENST00000378821 ANO2Q9NQ90 1003 aa22.04■■□□□ 1.12
TMEM88B-201ENST00000378821 MAD2L2Q9UI95 211 aa22.04■■□□□ 1.12
TMEM88B-201ENST00000378821 CASC1Q6TDU7 716 aa22.03■■□□□ 1.12
TMEM88B-201ENST00000378821 C16orf59Q7L2K0 433 aa22.03■■□□□ 1.12
TMEM88B-201ENST00000378821 FBXO11Q86XK2 927 aa22.03■■□□□ 1.12
TMEM88B-201ENST00000378821 SYTL5Q8TDW5 730 aaPredicted RBP22.03■■□□□ 1.12
TMEM88B-201ENST00000378821 COL20A1Q9P218 1284 aa22.03■■□□□ 1.12
TMEM88B-201ENST00000378821 MRPL11Q9Y3B7 192 aaKnown RBP22.03■■□□□ 1.12
TMEM88B-201ENST00000378821 KIAA1217Q5T5P2 1943 aa22.02■■□□□ 1.12
TMEM88B-201ENST00000378821 A6NJR5 290 aa22.02■■□□□ 1.12
TMEM88B-201ENST00000378821 KLRF2D3W0D1 207 aa22.02■■□□□ 1.12
TMEM88B-201ENST00000378821 E7EWF7 191 aa22.02■■□□□ 1.12
TMEM88B-201ENST00000378821 OPLAHO14841 1288 aa22.02■■□□□ 1.12
TMEM88B-201ENST00000378821 CPT1AP50416 773 aa22.02■■□□□ 1.12
TMEM88B-201ENST00000378821 PURAQ00577 322 aaKnown RBP22.02■■□□□ 1.12
TMEM88B-201ENST00000378821 RASIP1Q5U651 963 aa22.02■■□□□ 1.12
TMEM88B-201ENST00000378821 CCDC62Q6P9F0 684 aa22.02■■□□□ 1.12
TMEM88B-201ENST00000378821 STOX1Q6ZVD7 989 aa22.02■■□□□ 1.12
TMEM88B-201ENST00000378821 GUCD1Q96NT3 240 aa22.02■■□□□ 1.12
TMEM88B-201ENST00000378821 IWS1Q96ST2 819 aa22.02■■□□□ 1.12
TMEM88B-201ENST00000378821 POLR3EQ9NVU0 708 aa22.02■■□□□ 1.12
TMEM88B-201ENST00000378821 SCN10AQ9Y5Y9 1956 aa22.01■■□□□ 1.11
TMEM88B-201ENST00000378821 HSD17B4P51659 736 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms