RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 MAN1B1Q9UKM7 699 aa21.94■■□□□ 1.1
SSU72-204ENST00000378726 PRR12Q9ULL5 1215 aa21.94■■□□□ 1.1
SSU72-204ENST00000378726 PAXBP1Q9Y5B6 917 aa21.94■■□□□ 1.1
SSU72-204ENST00000378726 USP17L15C9J2P7 530 aa21.93■■□□□ 1.1
SSU72-204ENST00000378726 USP17L13C9JLJ4 530 aa21.93■■□□□ 1.1
SSU72-204ENST00000378726 USP17L11C9JVI0 530 aa21.93■■□□□ 1.1
SSU72-204ENST00000378726 USP17L18D6R9N7 530 aa21.93■■□□□ 1.1
SSU72-204ENST00000378726 USP17L22D6RA61 530 aa21.93■■□□□ 1.1
SSU72-204ENST00000378726 USP17L17D6RBQ6 530 aa21.93■■□□□ 1.1
SSU72-204ENST00000378726 USP17L19D6RCP7 530 aa21.93■■□□□ 1.1
SSU72-204ENST00000378726 USP17L20D6RJB6 530 aa21.93■■□□□ 1.1
SSU72-204ENST00000378726 STAT2P52630 851 aa21.93■■□□□ 1.1
SSU72-204ENST00000378726 USP17L24Q0WX57 530 aa21.93■■□□□ 1.1
SSU72-204ENST00000378726 E2F4Q16254 413 aa21.93■■□□□ 1.1
SSU72-204ENST00000378726 FAM83BQ5T0W9 1011 aa21.93■■□□□ 1.1
SSU72-204ENST00000378726 USP17L6PQ6QN14 398 aa21.93■■□□□ 1.1
SSU72-204ENST00000378726 BMP6P22004 513 aa21.92■■□□□ 1.1
SSU72-204ENST00000378726 ZYXQ15942 572 aaKnown RBP21.92■■□□□ 1.1
SSU72-204ENST00000378726 SPATA20Q8TB22 786 aa21.92■■□□□ 1.1
SSU72-204ENST00000378726 SH2D4AQ9H788 454 aa21.92■■□□□ 1.1
SSU72-204ENST00000378726 VCPKMTQ9H867 229 aa21.92■■□□□ 1.1
SSU72-204ENST00000378726 SMC2O95347 1197 aa21.92■■□□□ 1.1
SSU72-204ENST00000378726 UBA7P41226 1012 aa21.92■■□□□ 1.1
SSU72-204ENST00000378726 CEP135Q66GS9 1140 aa21.92■■□□□ 1.1
SSU72-204ENST00000378726 CCDC84Q86UT8 332 aaPredicted RBP21.92■■□□□ 1.1
SSU72-204ENST00000378726 CCDC112Q8NEF3 446 aa21.92■■□□□ 1.1
SSU72-204ENST00000378726 ZNF592Q92610 1267 aa21.92■■□□□ 1.1
SSU72-204ENST00000378726 GLIS2Q9BZE0 524 aaPredicted RBP21.92■■□□□ 1.1
SSU72-204ENST00000378726 PP2D1A8MPX8 630 aa21.91■■□□□ 1.1
SSU72-204ENST00000378726 SYCP1Q15431 976 aa21.91■■□□□ 1.1
SSU72-204ENST00000378726 USH1GQ495M9 461 aa21.91■■□□□ 1.1
SSU72-204ENST00000378726 FILIP1Q7Z7B0 1213 aa21.91■■□□□ 1.1
SSU72-204ENST00000378726 POTEDQ86YR6 584 aa21.91■■□□□ 1.1
SSU72-204ENST00000378726 TDP2O95551 362 aa21.91■■□□□ 1.1
SSU72-204ENST00000378726 SKILP12757 684 aa21.91■■□□□ 1.1
SSU72-204ENST00000378726 LMNB1P20700 586 aa21.91■■□□□ 1.1
SSU72-204ENST00000378726 KARSQ15046 597 aaKnown RBP21.91■■□□□ 1.1
SSU72-204ENST00000378726 STAMQ92783 540 aa21.91■■□□□ 1.1
SSU72-204ENST00000378726 FHDC1Q9C0D6 1143 aaPredicted RBP21.91■■□□□ 1.1
SSU72-204ENST00000378726 TECP42680 631 aa21.9■■□□□ 1.1
SSU72-204ENST00000378726 MORC3Q14149 939 aa21.9■■□□□ 1.1
SSU72-204ENST00000378726 PDXDC2PQ6P474 469 aa21.9■■□□□ 1.1
SSU72-204ENST00000378726 CHURC1Q8WUH1 139 aa21.9■■□□□ 1.1
SSU72-204ENST00000378726 AK8Q96MA6 479 aa21.9■■□□□ 1.1
SSU72-204ENST00000378726 CCSER1Q9C0I3 900 aa21.9■■□□□ 1.1
SSU72-204ENST00000378726 ARFGEF1Q9Y6D6 1849 aa21.9■■□□□ 1.1
SSU72-204ENST00000378726 CASP1P29466 404 aa21.9■■□□□ 1.1
SSU72-204ENST00000378726 TXKP42681 527 aa21.9■■□□□ 1.1
SSU72-204ENST00000378726 CCZ1BP86790 482 aa21.9■■□□□ 1.1
SSU72-204ENST00000378726 CCZ1P86791 482 aaPredicted RBP21.9■■□□□ 1.1
SSU72-204ENST00000378726 CALCRLQ16602 461 aa21.9■■□□□ 1.1
SSU72-204ENST00000378726 NBPF12Q5TAG4 269 aaPredicted RBP21.9■■□□□ 1.1
SSU72-204ENST00000378726 TRIML1Q8N9V2 468 aa21.9■■□□□ 1.1
SSU72-204ENST00000378726 MTMR9Q96QG7 549 aa21.9■■□□□ 1.1
SSU72-204ENST00000378726 MEIS2O14770 477 aa21.89■■□□□ 1.09
SSU72-204ENST00000378726 SLC37A4O43826 429 aa21.89■■□□□ 1.09
SSU72-204ENST00000378726 NCAPHQ15003 741 aa21.89■■□□□ 1.09
SSU72-204ENST00000378726 PPP4R3AQ6IN85 833 aa21.89■■□□□ 1.09
SSU72-204ENST00000378726 RASSF8Q8NHQ8 419 aa21.89■■□□□ 1.09
SSU72-204ENST00000378726 DISC1Q9NRI5 854 aa21.89■■□□□ 1.09
SSU72-204ENST00000378726 IKBKBO14920 756 aa21.88■■□□□ 1.09
SSU72-204ENST00000378726 STAT6P42226 847 aa21.88■■□□□ 1.09
SSU72-204ENST00000378726 DPYDQ12882 1025 aa21.88■■□□□ 1.09
SSU72-204ENST00000378726 RRAGBQ5VZM2 374 aa21.88■■□□□ 1.09
SSU72-204ENST00000378726 MLKLQ8NB16 471 aa21.88■■□□□ 1.09
SSU72-204ENST00000378726 GPC2Q8N158 579 aa21.88■■□□□ 1.09
SSU72-204ENST00000378726 KIFC2Q96AC6 838 aa21.88■■□□□ 1.09
SSU72-204ENST00000378726 ZNF341Q9BYN7 854 aa21.88■■□□□ 1.09
SSU72-204ENST00000378726 GPRC5DQ9NZD1 345 aa21.88■■□□□ 1.09
SSU72-204ENST00000378726 CTNND1O60716 968 aaKnown RBP21.87■■□□□ 1.09
SSU72-204ENST00000378726 TPM4P67936 248 aa21.87■■□□□ 1.09
SSU72-204ENST00000378726 ANGEL2Q5VTE6 544 aaKnown RBP21.87■■□□□ 1.09
SSU72-204ENST00000378726 NYAP1Q6ZVC0 841 aa21.87■■□□□ 1.09
SSU72-204ENST00000378726 GSDMAQ96QA5 445 aa21.87■■□□□ 1.09
SSU72-204ENST00000378726 MTRQ99707 1265 aa21.87■■□□□ 1.09
SSU72-204ENST00000378726 TRMT1Q9NXH9 659 aaKnown RBP21.87■■□□□ 1.09
SSU72-204ENST00000378726 ZHX1Q9UKY1 873 aaPredicted RBP21.87■■□□□ 1.09
SSU72-204ENST00000378726 CABP7Q86V35 215 aa21.87■■□□□ 1.09
SSU72-204ENST00000378726 PLIN2Q99541 437 aa21.87■■□□□ 1.09
SSU72-204ENST00000378726 FEZ1Q99689 392 aa21.87■■□□□ 1.09
SSU72-204ENST00000378726 BLZF1Q9H2G9 400 aa21.87■■□□□ 1.09
SSU72-204ENST00000378726 DDX25Q9UHL0 483 aaKnown RBP21.87■■□□□ 1.09
SSU72-204ENST00000378726 PLA2G6O60733 806 aa21.86■■□□□ 1.09
SSU72-204ENST00000378726 TAL1P17542 331 aaPredicted RBP21.86■■□□□ 1.09
SSU72-204ENST00000378726 PTPN14Q15678 1187 aa21.86■■□□□ 1.09
SSU72-204ENST00000378726 NAALADL2Q58DX5 795 aa21.86■■□□□ 1.09
SSU72-204ENST00000378726 IGSF22Q8N9C0 903 aa21.86■■□□□ 1.09
SSU72-204ENST00000378726 TRPM4Q8TD43 1214 aa21.86■■□□□ 1.09
SSU72-204ENST00000378726 ANO3Q9BYT9 981 aa21.86■■□□□ 1.09
SSU72-204ENST00000378726 USP11P51784 963 aa21.86■■□□□ 1.09
SSU72-204ENST00000378726 MYL5Q02045 173 aa21.86■■□□□ 1.09
SSU72-204ENST00000378726 TRAF1Q13077 416 aa21.86■■□□□ 1.09
SSU72-204ENST00000378726 AP3B2Q13367 1082 aa21.86■■□□□ 1.09
SSU72-204ENST00000378726 MCTP2Q6DN12 878 aa21.86■■□□□ 1.09
SSU72-204ENST00000378726 FAM160B2Q86V87 743 aa21.86■■□□□ 1.09
SSU72-204ENST00000378726 DACH1Q9UI36 760 aa21.86■■□□□ 1.09
SSU72-204ENST00000378726 FEM1BQ9UK73 627 aa21.86■■□□□ 1.09
SSU72-204ENST00000378726 GTPBP6O43824 516 aaPredicted RBP21.85■■□□□ 1.09
SSU72-204ENST00000378726 GCFC2P16383 781 aaKnown RBP21.85■■□□□ 1.09
SSU72-204ENST00000378726 CUL4BQ13620 913 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms