RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 SLC30A10Q6XR72 485 aa21.63■■□□□ 1.05
SSU72-203ENST00000378725 ZNF713Q8N859 430 aaPredicted RBP21.63■■□□□ 1.05
SSU72-203ENST00000378725 NECAB1Q8N987 351 aa21.63■■□□□ 1.05
SSU72-203ENST00000378725 GTF3C6Q969F1 213 aa21.63■■□□□ 1.05
SSU72-203ENST00000378725 ZNF333Q96JL9 665 aa21.63■■□□□ 1.05
SSU72-203ENST00000378725 CTDNEP1O95476 244 aa21.62■■□□□ 1.05
SSU72-203ENST00000378725 INHAP05111 366 aa21.62■■□□□ 1.05
SSU72-203ENST00000378725 SCG2P13521 617 aa21.62■■□□□ 1.05
SSU72-203ENST00000378725 SSRP1Q08945 709 aaKnown RBP21.62■■□□□ 1.05
SSU72-203ENST00000378725 TRIM32Q13049 653 aa21.62■■□□□ 1.05
SSU72-203ENST00000378725 MAP3K21Q5TCX8 1036 aa21.62■■□□□ 1.05
SSU72-203ENST00000378725 SYTL5Q8TDW5 730 aaPredicted RBP21.62■■□□□ 1.05
SSU72-203ENST00000378725 ABHD8Q96I13 439 aa21.62■■□□□ 1.05
SSU72-203ENST00000378725 TINF2Q9BSI4 451 aa21.62■■□□□ 1.05
SSU72-203ENST00000378725 SLC26A6Q9BXS9 759 aa21.62■■□□□ 1.05
SSU72-203ENST00000378725 BARHL2Q9NY43 387 aa21.62■■□□□ 1.05
SSU72-203ENST00000378725 BAZ2BQ9UIF8 2168 aaKnown RBP21.61■■□□□ 1.05
SSU72-203ENST00000378725 ASTN1O14525 1302 aa21.61■■□□□ 1.05
SSU72-203ENST00000378725 CDKL5O76039 1030 aa21.61■■□□□ 1.05
SSU72-203ENST00000378725 CALML3P27482 149 aa21.61■■□□□ 1.05
SSU72-203ENST00000378725 UBXN2AP68543 259 aa21.61■■□□□ 1.05
SSU72-203ENST00000378725 AKAP17AQ02040 695 aaKnown RBP21.61■■□□□ 1.05
SSU72-203ENST00000378725 MFSD14CQ5VZR4 134 aa21.61■■□□□ 1.05
SSU72-203ENST00000378725 HEATR3Q7Z4Q2 680 aa21.61■■□□□ 1.05
SSU72-203ENST00000378725 TRIM22Q8IYM9 498 aa21.61■■□□□ 1.05
SSU72-203ENST00000378725 GPKOWQ92917 476 aaPredicted RBP eCLIP21.61■■□□□ 1.05
SSU72-203ENST00000378725 PURBQ96QR8 312 aaKnown RBP21.61■■□□□ 1.05
SSU72-203ENST00000378725 SH2B1Q9NRF2 756 aaPredicted RBP21.61■■□□□ 1.05
SSU72-203ENST00000378725 BIN2Q9UBW5 565 aaPredicted RBP21.61■■□□□ 1.05
SSU72-203ENST00000378725 LOC102724159A0A0B4J2E5 919 aa21.6■■□□□ 1.05
SSU72-203ENST00000378725 GCOM1H8Y6P7 765 aaPredicted RBP21.6■■□□□ 1.05
SSU72-203ENST00000378725 STXBP3O00186 592 aa21.6■■□□□ 1.05
SSU72-203ENST00000378725 CFBP00751 764 aa21.6■■□□□ 1.05
SSU72-203ENST00000378725 POLR2MP0CAP2 368 aa21.6■■□□□ 1.05
SSU72-203ENST00000378725 CYP2C19P33261 490 aa21.6■■□□□ 1.05
SSU72-203ENST00000378725 MCM2P49736 904 aa21.6■■□□□ 1.05
SSU72-203ENST00000378725 CACNB2Q08289 660 aaPredicted RBP21.6■■□□□ 1.05
SSU72-203ENST00000378725 ST3GAL1Q11201 340 aa21.6■■□□□ 1.05
SSU72-203ENST00000378725 PWP2Q15269 919 aaKnown RBP21.6■■□□□ 1.05
SSU72-203ENST00000378725 TYW1BQ6NUM6 668 aa21.6■■□□□ 1.05
SSU72-203ENST00000378725 PPP1R18Q6NYC8 613 aa21.6■■□□□ 1.05
SSU72-203ENST00000378725 DNERQ8NFT8 737 aa21.6■■□□□ 1.05
SSU72-203ENST00000378725 MORC4Q8TE76 937 aa21.6■■□□□ 1.05
SSU72-203ENST00000378725 COL20A1Q9P218 1284 aa21.6■■□□□ 1.05
SSU72-203ENST00000378725 ADD3Q9UEY8 706 aaKnown RBP21.6■■□□□ 1.05
SSU72-203ENST00000378725 ZNFX1Q9P2E3 1918 aaKnown RBP21.6■■□□□ 1.05
SSU72-203ENST00000378725 SYNGAP1Q96PV0 1343 aa21.59■■□□□ 1.05
SSU72-203ENST00000378725 PIK3CDO00329 1044 aa21.59■■□□□ 1.05
SSU72-203ENST00000378725 PPFIA3O75145 1194 aa21.59■■□□□ 1.05
SSU72-203ENST00000378725 CD2BP2O95400 341 aaKnown RBP21.59■■□□□ 1.05
SSU72-203ENST00000378725 TEX2Q8IWB9 1127 aa21.59■■□□□ 1.05
SSU72-203ENST00000378725 TAAR1Q96RJ0 339 aa21.59■■□□□ 1.05
SSU72-203ENST00000378725 PSTPIP2Q9H939 334 aa21.59■■□□□ 1.05
SSU72-203ENST00000378725 STK36Q9NRP7 1315 aa21.58■■□□□ 1.05
SSU72-203ENST00000378725 ASB14A6NK59 587 aa21.58■■□□□ 1.05
SSU72-203ENST00000378725 MEIS2O14770 477 aa21.58■■□□□ 1.05
SSU72-203ENST00000378725 DEXIO95424 95 aa21.58■■□□□ 1.05
SSU72-203ENST00000378725 SNAI1O95863 264 aaPredicted RBP21.58■■□□□ 1.05
SSU72-203ENST00000378725 NRBP1Q9UHY1 535 aa21.58■■□□□ 1.05
SSU72-203ENST00000378725 RPTORQ8N122 1335 aa21.57■■□□□ 1.04
SSU72-203ENST00000378725 PRKAR2AP13861 404 aaKnown RBP21.57■■□□□ 1.04
SSU72-203ENST00000378725 HOXA13P31271 388 aaPredicted RBP21.57■■□□□ 1.04
SSU72-203ENST00000378725 ALDH5A1P51649 535 aaPredicted RBP21.57■■□□□ 1.04
SSU72-203ENST00000378725 NAPAP54920 295 aa21.57■■□□□ 1.04
SSU72-203ENST00000378725 MTFR1Q15390 333 aa21.57■■□□□ 1.04
SSU72-203ENST00000378725 NSUN7Q8NE18 718 aaKnown RBP21.57■■□□□ 1.04
SSU72-203ENST00000378725 RIC8AQ9NPQ8 531 aa21.57■■□□□ 1.04
SSU72-203ENST00000378725 SH3GLB2Q9NR46 395 aa21.57■■□□□ 1.04
SSU72-203ENST00000378725 MYH6P13533 1939 aa21.57■■□□□ 1.04
SSU72-203ENST00000378725 ESYT2A0FGR8 921 aa21.56■■□□□ 1.04
SSU72-203ENST00000378725 SMCO2A6NFE2 343 aa21.56■■□□□ 1.04
SSU72-203ENST00000378725 CYBAP13498 195 aa21.56■■□□□ 1.04
SSU72-203ENST00000378725 CCL5P13501 91 aa21.56■■□□□ 1.04
SSU72-203ENST00000378725 FDPSP14324 419 aaKnown RBP21.56■■□□□ 1.04
SSU72-203ENST00000378725 EDNRBP24530 442 aa21.56■■□□□ 1.04
SSU72-203ENST00000378725 USP17L6PQ6QN14 398 aa21.56■■□□□ 1.04
SSU72-203ENST00000378725 ARMCX2Q7L311 632 aa21.56■■□□□ 1.04
SSU72-203ENST00000378725 TRPV1Q8NER1 839 aa21.56■■□□□ 1.04
SSU72-203ENST00000378725 NSUN6Q8TEA1 469 aaKnown RBP21.56■■□□□ 1.04
SSU72-203ENST00000378725 CUL5Q93034 780 aa21.56■■□□□ 1.04
SSU72-203ENST00000378725 LLPHQ9BRT6 129 aaKnown RBP21.56■■□□□ 1.04
SSU72-203ENST00000378725 ZMYND12Q9H0C1 365 aa21.56■■□□□ 1.04
SSU72-203ENST00000378725 UNC93B1Q9H1C4 597 aa21.56■■□□□ 1.04
SSU72-203ENST00000378725 HMX1Q9NP08 348 aaPredicted RBP21.56■■□□□ 1.04
SSU72-203ENST00000378725 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.56■■□□□ 1.04
SSU72-203ENST00000378725 MRPL12P52815 198 aaKnown RBP21.55■■□□□ 1.04
SSU72-203ENST00000378725 PRAMEF19Q5SWL8 479 aa21.55■■□□□ 1.04
SSU72-203ENST00000378725 CCDC83Q8IWF9 413 aa21.55■■□□□ 1.04
SSU72-203ENST00000378725 FAM177A1Q8N128 213 aaPredicted RBP21.55■■□□□ 1.04
SSU72-203ENST00000378725 CCDC12Q8WUD4 166 aaPredicted RBP21.55■■□□□ 1.04
SSU72-203ENST00000378725 SHISA4Q96DD7 197 aa21.55■■□□□ 1.04
SSU72-203ENST00000378725 TMX3Q96JJ7 454 aa21.55■■□□□ 1.04
SSU72-203ENST00000378725 IWS1Q96ST2 819 aa21.55■■□□□ 1.04
SSU72-203ENST00000378725 RMDN3Q96TC7 470 aa21.55■■□□□ 1.04
SSU72-203ENST00000378725 KATNBL1Q9H079 304 aa21.55■■□□□ 1.04
SSU72-203ENST00000378725 GLT8D2Q9H1C3 349 aa21.55■■□□□ 1.04
SSU72-203ENST00000378725 B4DLN1 442 aa21.54■■□□□ 1.04
SSU72-203ENST00000378725 ZNF865P0CJ78 1059 aaPredicted RBP21.54■■□□□ 1.04
SSU72-203ENST00000378725 CCND3P30281 292 aaPredicted RBP21.54■■□□□ 1.04
SSU72-203ENST00000378725 SMARCC2Q8TAQ2 1214 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms