RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 MYO6Q9UM54 1294 aa7.46□□□□□ -1.21
CDKAL1-202ENST00000378610 RGPD8O14715 1765 aaPredicted RBP7.46□□□□□ -1.21
CDKAL1-202ENST00000378610 TIAM2Q8IVF5 1701 aa7.46□□□□□ -1.22
CDKAL1-202ENST00000378610 WDR19Q8NEZ3 1342 aa7.46□□□□□ -1.22
CDKAL1-202ENST00000378610 CASZ1Q86V15 1759 aa7.46□□□□□ -1.22
CDKAL1-202ENST00000378610 CHD4Q14839 1912 aa7.46□□□□□ -1.22
CDKAL1-202ENST00000378610 KIF28PB7ZC32 967 aa7.46□□□□□ -1.22
CDKAL1-202ENST00000378610 FAM13AO94988 1023 aa7.46□□□□□ -1.22
CDKAL1-202ENST00000378610 KIF23Q02241 960 aaPredicted RBP7.46□□□□□ -1.22
CDKAL1-202ENST00000378610 PTPN12Q05209 780 aaKnown RBP7.46□□□□□ -1.22
CDKAL1-202ENST00000378610 SQSTM1Q13501 440 aa7.46□□□□□ -1.22
CDKAL1-202ENST00000378610 KARSQ15046 597 aaKnown RBP7.46□□□□□ -1.22
CDKAL1-202ENST00000378610 TTLL7Q6ZT98 887 aa7.46□□□□□ -1.22
CDKAL1-202ENST00000378610 ATP6V0A4Q9HBG4 840 aa7.46□□□□□ -1.22
CDKAL1-202ENST00000378610 VEZTQ9HBM0 779 aa7.46□□□□□ -1.22
CDKAL1-202ENST00000378610 TAGLN3Q9UI15 199 aa7.46□□□□□ -1.22
CDKAL1-202ENST00000378610 ARHGAP23Q9P227 1491 aa7.46□□□□□ -1.22
CDKAL1-202ENST00000378610 ZMYM6O95789 1325 aa7.46□□□□□ -1.22
CDKAL1-202ENST00000378610 PNMA6FA0A0J9YX94 578 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 MYO1FO00160 1098 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 TFRCP02786 760 aaKnown RBP7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 TRAPPC10P48553 1259 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 EPHB1P54762 984 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 PRSS12P56730 875 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 LONRF1Q17RB8 773 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 CAVIN3Q969G5 261 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 E2F7Q96AV8 911 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 SELENOOQ9BVL4 669 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 CFHR5Q9BXR6 569 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 LRRC27Q9C0I9 530 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 KLC4Q9NSK0 619 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 TLR7Q9NYK1 1049 aaKnown RBP7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 ADD3Q9UEY8 706 aaKnown RBP7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 PLEKHG1Q9ULL1 1385 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 NUP188Q5SRE5 1749 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 ADAMTS13Q76LX8 1427 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 ALS2Q96Q42 1657 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 LRRC10BA6NIK2 292 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 BIN1O00499 593 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 RHOXF2BP0C7M4 288 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 MYBL2P10244 700 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 NAP1L1P55209 391 aaKnown RBP7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 ERVK-24P63145 666 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 GRAMD1BQ3KR37 738 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 TRAF7Q6Q0C0 670 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 KDM7AQ6ZMT4 941 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 CD302Q8IX05 232 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 MLKLQ8NB16 471 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 IL17REQ8NFR9 667 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 BCAS4Q8TDM0 211 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 SMARCC1Q92922 1105 aaPredicted RBP7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 NUDT16Q96DE0 195 aaKnown RBP7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 RHOXF2Q9BQY4 288 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 CD248Q9HCU0 757 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 DDX20Q9UHI6 824 aaKnown RBP7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 HPS5Q9UPZ3 1129 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 REXO2Q9Y3B8 237 aaKnown RBP7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 NFAT5O94916 1531 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 NID2Q14112 1375 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 RGPD2P0DJD1 1756 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 GOLGA6CA6NDK9 693 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 GOLIM4O00461 696 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 PHACTR2O75167 634 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 GOLGA6DP0CG33 693 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 VDRP11473 427 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 MCL1Q07820 350 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 PNOCQ13519 176 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 TTMPQ5BVD1 217 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 ZNF569Q5MCW4 686 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 RCSD1Q6JBY9 416 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 AACSQ86V21 672 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 PDCD7Q8N8D1 485 aaKnown RBP7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 RDH13Q8NBN7 331 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 CCDC148Q8NFR7 591 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 ZNF483Q8TF39 744 aaPredicted RBP7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 RIN2Q8WYP3 895 aaPredicted RBP7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 HINFPQ9BQA5 517 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 EHD4Q9H223 541 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 GOLGA6AQ9NYA3 693 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 MAN1B1Q9UKM7 699 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 LEMD3Q9Y2U8 911 aa7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 V9GY48 417 aaPredicted RBP7.45□□□□□ -1.22
CDKAL1-202ENST00000378610 MYH2Q9UKX2 1941 aa7.44□□□□□ -1.22
CDKAL1-202ENST00000378610 GOLGA6BA6NDN3 693 aa7.44□□□□□ -1.22
CDKAL1-202ENST00000378610 GYPCP04921 128 aa7.44□□□□□ -1.22
CDKAL1-202ENST00000378610 SRGNP10124 158 aa7.44□□□□□ -1.22
CDKAL1-202ENST00000378610 SYKP43405 635 aa7.44□□□□□ -1.22
CDKAL1-202ENST00000378610 ATP1A2P50993 1020 aa7.44□□□□□ -1.22
CDKAL1-202ENST00000378610 HDGFP51858 240 aaKnown RBP7.44□□□□□ -1.22
CDKAL1-202ENST00000378610 NNTQ13423 1086 aa7.44□□□□□ -1.22
CDKAL1-202ENST00000378610 TAF7Q15545 349 aaPredicted RBP7.44□□□□□ -1.22
CDKAL1-202ENST00000378610 ZKSCAN8Q15776 578 aaPredicted RBP7.44□□□□□ -1.22
CDKAL1-202ENST00000378610 LACTB2Q53H82 288 aaPredicted RBP7.44□□□□□ -1.22
CDKAL1-202ENST00000378610 ACBD5Q5T8D3 534 aaPredicted RBP7.44□□□□□ -1.22
CDKAL1-202ENST00000378610 MMGT1Q8N4V1 131 aa7.44□□□□□ -1.22
CDKAL1-202ENST00000378610 ATL2Q8NHH9 583 aa7.44□□□□□ -1.22
CDKAL1-202ENST00000378610 EMID1Q96A84 441 aaPredicted RBP7.44□□□□□ -1.22
CDKAL1-202ENST00000378610 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.44□□□□□ -1.221e-6■■■■■ 99.9
CDKAL1-202ENST00000378610 TMEM260Q9NX78 707 aa7.44□□□□□ -1.22
CDKAL1-202ENST00000378610 FAM184BQ9ULE4 1060 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms