RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 CASKIN2Q8WXE0 1202 aa11.6□□□□□ -0.55
ARHGEF39-201ENST00000378387 METTL22Q9BUU2 404 aaPredicted RBP11.6□□□□□ -0.55
ARHGEF39-201ENST00000378387 NUP58Q9BVL2 599 aa11.6□□□□□ -0.55
ARHGEF39-201ENST00000378387 AGXT2Q9BYV1 514 aa11.6□□□□□ -0.55
ARHGEF39-201ENST00000378387 DDX47Q9H0S4 455 aaKnown RBP11.6□□□□□ -0.55
ARHGEF39-201ENST00000378387 GOLPH3Q9H4A6 298 aa11.6□□□□□ -0.55
ARHGEF39-201ENST00000378387 PANK4Q9NVE7 773 aa11.6□□□□□ -0.55
ARHGEF39-201ENST00000378387 BIN2Q9UBW5 565 aaPredicted RBP11.6□□□□□ -0.55
ARHGEF39-201ENST00000378387 LIMA1Q9UHB6 759 aaKnown RBP11.6□□□□□ -0.55
ARHGEF39-201ENST00000378387 PNMA2Q9UL42 364 aa11.6□□□□□ -0.55
ARHGEF39-201ENST00000378387 CCT8L1PA6NM43 557 aa11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 RPS6KA1Q15418 735 aa11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 KIAA0753Q2KHM9 967 aa11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 PPP4R3AQ6IN85 833 aa11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 VSIG1Q86XK7 387 aa11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 ZNF513Q8N8E2 541 aaPredicted RBP11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 C3orf20Q8ND61 904 aa11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 SLC17A8Q8NDX2 589 aa11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 WHAMMQ8TF30 809 aa11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 IFT74Q96LB3 600 aa11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 CNOT6LQ96LI5 555 aaKnown RBP11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 USH1CQ9Y6N9 552 aa11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 SH2B2O14492 632 aaPredicted RBP11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 RGS16O15492 202 aaPredicted RBP11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 PALMO75781 387 aa11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 LAMB3Q13751 1172 aa11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 CCDC38Q502W7 563 aa11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 FAM228AQ86W67 206 aa11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 TMEM87BQ96K49 555 aa11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 DDX23Q9BUQ8 820 aaKnown RBP11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 TAF1DQ9H5J8 278 aaPredicted RBP11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 ZSWIM5Q9P217 1185 aa11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 CAPN11Q9UMQ6 739 aa11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 ZC3H4Q9UPT8 1303 aaKnown RBP11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 hCG_2014768A0A024R1R8 64 aa11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 KRIT1O00522 736 aa11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 KRT13P13646 458 aa11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 SPICE1Q8N0Z3 855 aa11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 CDK5RAP3Q96JB5 506 aa11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 NACAP1Q9BZK3 213 aa11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 SLC39A2Q9NP94 309 aa11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 USP32Q8NFA0 1604 aa11.59□□□□□ -0.55
ARHGEF39-201ENST00000378387 SEMA3EO15041 775 aa11.58□□□□□ -0.55
ARHGEF39-201ENST00000378387 RAD51CO43502 376 aa11.58□□□□□ -0.55
ARHGEF39-201ENST00000378387 HOXB7P09629 217 aa11.58□□□□□ -0.55
ARHGEF39-201ENST00000378387 HSD17B3P37058 310 aa11.58□□□□□ -0.55
ARHGEF39-201ENST00000378387 PAPOLAP51003 745 aaKnown RBP11.58□□□□□ -0.55
ARHGEF39-201ENST00000378387 MUM1Q2TAK8 710 aa11.58□□□□□ -0.55
ARHGEF39-201ENST00000378387 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.58□□□□□ -0.55
ARHGEF39-201ENST00000378387 OTUD6AQ7L8S5 288 aa11.58□□□□□ -0.55
ARHGEF39-201ENST00000378387 FAM114A1Q8IWE2 563 aa11.58□□□□□ -0.55
ARHGEF39-201ENST00000378387 RNF10Q8N5U6 811 aaKnown RBP11.58□□□□□ -0.55
ARHGEF39-201ENST00000378387 MIGA1Q8NAN2 632 aa11.58□□□□□ -0.55
ARHGEF39-201ENST00000378387 RETREG2Q8NC44 543 aa11.58□□□□□ -0.55
ARHGEF39-201ENST00000378387 THRAP3Q9Y2W1 955 aaKnown RBP11.58□□□□□ -0.55
ARHGEF39-201ENST00000378387 ITIH6Q6UXX5 1313 aa11.58□□□□□ -0.56
ARHGEF39-201ENST00000378387 RNMTO43148 476 aaKnown RBP11.58□□□□□ -0.56
ARHGEF39-201ENST00000378387 LUC7L3O95232 432 aaKnown RBP11.58□□□□□ -0.56
ARHGEF39-201ENST00000378387 ZNF658Q5TYW1 1059 aaPredicted RBP11.58□□□□□ -0.56
ARHGEF39-201ENST00000378387 RASIP1Q5U651 963 aa11.58□□□□□ -0.56
ARHGEF39-201ENST00000378387 HELBQ8NG08 1087 aaPredicted RBP11.58□□□□□ -0.56
ARHGEF39-201ENST00000378387 RAPGEF4Q8WZA2 1011 aa11.58□□□□□ -0.56
ARHGEF39-201ENST00000378387 ECT2Q9H8V3 914 aa11.58□□□□□ -0.56
ARHGEF39-201ENST00000378387 STRN4Q9NRL3 753 aa11.58□□□□□ -0.56
ARHGEF39-201ENST00000378387 EFCAB6Q5THR3 1501 aa11.58□□□□□ -0.56
ARHGEF39-201ENST00000378387 EYA2O00167 538 aa11.58□□□□□ -0.56
ARHGEF39-201ENST00000378387 IGF2BP3O00425 579 aaKnown RBP eCLIP11.58□□□□□ -0.56
ARHGEF39-201ENST00000378387 GTPBP6O43824 516 aaPredicted RBP11.58□□□□□ -0.56
ARHGEF39-201ENST00000378387 PECAM1P16284 738 aaPredicted RBP11.58□□□□□ -0.56
ARHGEF39-201ENST00000378387 IGHMBP2P38935 993 aaKnown RBP11.58□□□□□ -0.56
ARHGEF39-201ENST00000378387 USP4Q13107 963 aa11.58□□□□□ -0.56
ARHGEF39-201ENST00000378387 CCDC155Q8N6L0 562 aa11.58□□□□□ -0.56
ARHGEF39-201ENST00000378387 CPS1P31327 1500 aa11.57□□□□□ -0.56
ARHGEF39-201ENST00000378387 DAPK3O43293 454 aa11.57□□□□□ -0.56
ARHGEF39-201ENST00000378387 ATP2A2P16615 1042 aaKnown RBP11.57□□□□□ -0.56
ARHGEF39-201ENST00000378387 ITGB3BPQ13352 177 aaPredicted RBP11.57□□□□□ -0.56
ARHGEF39-201ENST00000378387 AKAP4Q5JQC9 854 aa11.57□□□□□ -0.56
ARHGEF39-201ENST00000378387 WDR59Q6PJI9 974 aa11.57□□□□□ -0.56
ARHGEF39-201ENST00000378387 TEKT4Q8WW24 435 aa11.57□□□□□ -0.56
ARHGEF39-201ENST00000378387 PSMD1Q99460 953 aa11.57□□□□□ -0.56
ARHGEF39-201ENST00000378387 FOXP1Q9H334 677 aaPredicted RBP11.57□□□□□ -0.56
ARHGEF39-201ENST00000378387 BABAM1Q9NWV8 329 aa11.57□□□□□ -0.56
ARHGEF39-201ENST00000378387 EPB41P11171 864 aaKnown RBP11.57□□□□□ -0.56
ARHGEF39-201ENST00000378387 TATP17735 454 aaPredicted RBP11.57□□□□□ -0.56
ARHGEF39-201ENST00000378387 GBP1P32455 592 aa11.57□□□□□ -0.56
ARHGEF39-201ENST00000378387 SLC1A4P43007 532 aa11.57□□□□□ -0.56
ARHGEF39-201ENST00000378387 KCNJ2P63252 427 aa11.57□□□□□ -0.56
ARHGEF39-201ENST00000378387 CDC37Q16543 378 aaPredicted RBP11.57□□□□□ -0.56
ARHGEF39-201ENST00000378387 IQCKQ8N0W5 287 aa11.57□□□□□ -0.56
ARHGEF39-201ENST00000378387 FERMT2Q96AC1 680 aa11.57□□□□□ -0.56
ARHGEF39-201ENST00000378387 ARMT1Q9H993 441 aa11.57□□□□□ -0.56
ARHGEF39-201ENST00000378387 IQSEC3Q9UPP2 1182 aaPredicted RBP11.57□□□□□ -0.56
ARHGEF39-201ENST00000378387 PBX1P40424 430 aa11.57□□□□□ -0.56
ARHGEF39-201ENST00000378387 LDHAL6AQ6ZMR3 332 aa11.57□□□□□ -0.56
ARHGEF39-201ENST00000378387 APTXQ7Z2E3 356 aaKnown RBP11.57□□□□□ -0.56
ARHGEF39-201ENST00000378387 SH3BP1Q9Y3L3 701 aa11.57□□□□□ -0.56
ARHGEF39-201ENST00000378387 CCDC194A0A1B0GVG4 234 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 FMNL1O95466 1100 aaPredicted RBP11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 CHN1P15882 459 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 ERFP50548 548 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms