RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 USP17L6PQ6QN14 398 aa13.52□□□□□ -0.25
DEPDC4-202ENST00000378244 FCHSD1Q86WN1 690 aa13.52□□□□□ -0.25
DEPDC4-202ENST00000378244 MAML3Q96JK9 1138 aa13.52□□□□□ -0.25
DEPDC4-202ENST00000378244 SLC5A4Q9NY91 659 aa13.52□□□□□ -0.25
DEPDC4-202ENST00000378244 NID2Q14112 1375 aa13.52□□□□□ -0.25
DEPDC4-202ENST00000378244 DNAJC25-GNG10A0A024R161 153 aa13.51□□□□□ -0.25
DEPDC4-202ENST00000378244 PRPF3O43395 683 aaKnown RBP13.51□□□□□ -0.25
DEPDC4-202ENST00000378244 JAK2O60674 1132 aa13.51□□□□□ -0.25
DEPDC4-202ENST00000378244 XRCC5P13010 732 aaKnown RBP13.51□□□□□ -0.25
DEPDC4-202ENST00000378244 SCG2P13521 617 aa13.51□□□□□ -0.25
DEPDC4-202ENST00000378244 ZNF792Q3KQV3 632 aa13.51□□□□□ -0.25
DEPDC4-202ENST00000378244 PRAMEF19Q5SWL8 479 aa13.51□□□□□ -0.25
DEPDC4-202ENST00000378244 RNF26Q9BY78 433 aaPredicted RBP13.51□□□□□ -0.25
DEPDC4-202ENST00000378244 COL20A1Q9P218 1284 aa13.51□□□□□ -0.25
DEPDC4-202ENST00000378244 PFASO15067 1338 aa13.51□□□□□ -0.25
DEPDC4-202ENST00000378244 MYH6P13533 1939 aa13.51□□□□□ -0.25
DEPDC4-202ENST00000378244 SOWAHBA6NEL2 793 aa13.51□□□□□ -0.25
DEPDC4-202ENST00000378244 INHAP05111 366 aa13.51□□□□□ -0.25
DEPDC4-202ENST00000378244 HOXC6P09630 235 aa13.51□□□□□ -0.25
DEPDC4-202ENST00000378244 PFKFB3Q16875 520 aaPredicted RBP13.51□□□□□ -0.25
DEPDC4-202ENST00000378244 EEPD1Q7L9B9 569 aa13.51□□□□□ -0.25
DEPDC4-202ENST00000378244 MCF2L2Q86YR7 1114 aa13.51□□□□□ -0.25
DEPDC4-202ENST00000378244 TMX3Q96JJ7 454 aa13.51□□□□□ -0.25
DEPDC4-202ENST00000378244 PSTPIP2Q9H939 334 aa13.51□□□□□ -0.25
DEPDC4-202ENST00000378244 GJB4Q9NTQ9 266 aa13.51□□□□□ -0.25
DEPDC4-202ENST00000378244 VPS54Q9P1Q0 977 aa13.51□□□□□ -0.25
DEPDC4-202ENST00000378244 ASTN1O14525 1302 aa13.5□□□□□ -0.25
DEPDC4-202ENST00000378244 FOSBP53539 338 aa13.5□□□□□ -0.25
DEPDC4-202ENST00000378244 UBXN2AP68543 259 aa13.5□□□□□ -0.25
DEPDC4-202ENST00000378244 TRAF1Q13077 416 aa13.5□□□□□ -0.25
DEPDC4-202ENST00000378244 MTFR1Q15390 333 aa13.5□□□□□ -0.25
DEPDC4-202ENST00000378244 FAM133AQ8N9E0 248 aa13.5□□□□□ -0.25
DEPDC4-202ENST00000378244 SLAIN1Q8ND83 568 aa13.5□□□□□ -0.25
DEPDC4-202ENST00000378244 SYTL5Q8TDW5 730 aaPredicted RBP13.5□□□□□ -0.25
DEPDC4-202ENST00000378244 TAAR1Q96RJ0 339 aa13.5□□□□□ -0.25
DEPDC4-202ENST00000378244 BARHL2Q9NY43 387 aa13.5□□□□□ -0.25
DEPDC4-202ENST00000378244 PLXNB2O15031 1838 aa13.5□□□□□ -0.25
DEPDC4-202ENST00000378244 CDKL5O76039 1030 aa13.5□□□□□ -0.25
DEPDC4-202ENST00000378244 PRKAR2AP13861 404 aaKnown RBP13.5□□□□□ -0.25
DEPDC4-202ENST00000378244 UBE2SQ16763 222 aa13.5□□□□□ -0.25
DEPDC4-202ENST00000378244 PXYLP1Q8TE99 480 aa13.5□□□□□ -0.25
DEPDC4-202ENST00000378244 ZFP91Q96JP5 570 aaPredicted RBP13.5□□□□□ -0.25
DEPDC4-202ENST00000378244 ZSCAN31Q96LW9 406 aaPredicted RBP13.5□□□□□ -0.25
DEPDC4-202ENST00000378244 FGD4Q96M96 766 aa13.5□□□□□ -0.25
DEPDC4-202ENST00000378244 TINF2Q9BSI4 451 aa13.5□□□□□ -0.25
DEPDC4-202ENST00000378244 ORC3Q9UBD5 711 aaPredicted RBP13.5□□□□□ -0.25
DEPDC4-202ENST00000378244 SMCO2A6NFE2 343 aa13.49□□□□□ -0.25
DEPDC4-202ENST00000378244 GCOM1H8Y6P7 765 aaPredicted RBP13.49□□□□□ -0.25
DEPDC4-202ENST00000378244 STXBP3O00186 592 aa13.49□□□□□ -0.25
DEPDC4-202ENST00000378244 HMGCRP04035 888 aa13.49□□□□□ -0.25
DEPDC4-202ENST00000378244 POLR2MP0CAP2 368 aa13.49□□□□□ -0.25
DEPDC4-202ENST00000378244 CNGA1P29973 690 aa13.49□□□□□ -0.25
DEPDC4-202ENST00000378244 CACNB2Q08289 660 aaPredicted RBP13.49□□□□□ -0.25
DEPDC4-202ENST00000378244 NSUN7Q8NE18 718 aaKnown RBP13.49□□□□□ -0.25
DEPDC4-202ENST00000378244 SMARCC2Q8TAQ2 1214 aa13.49□□□□□ -0.25
DEPDC4-202ENST00000378244 DEXIO95424 95 aa13.48□□□□□ -0.25
DEPDC4-202ENST00000378244 EIF2AK2P19525 551 aaKnown RBP13.48□□□□□ -0.25
DEPDC4-202ENST00000378244 RMDN3Q96TC7 470 aa13.48□□□□□ -0.25
DEPDC4-202ENST00000378244 SH2B1Q9NRF2 756 aaPredicted RBP13.48□□□□□ -0.25
DEPDC4-202ENST00000378244 RBM27Q9P2N5 1060 aaKnown RBP13.48□□□□□ -0.25
DEPDC4-202ENST00000378244 ADAMTS3O15072 1205 aa13.48□□□□□ -0.25
DEPDC4-202ENST00000378244 FDPSP14324 419 aaKnown RBP13.48□□□□□ -0.25
DEPDC4-202ENST00000378244 MFSD14CQ5VZR4 134 aa13.48□□□□□ -0.25
DEPDC4-202ENST00000378244 ANO1Q5XXA6 986 aa13.48□□□□□ -0.25
DEPDC4-202ENST00000378244 CUL5Q93034 780 aa13.48□□□□□ -0.25
DEPDC4-202ENST00000378244 SHISA4Q96DD7 197 aa13.48□□□□□ -0.25
DEPDC4-202ENST00000378244 ABHD8Q96I13 439 aa13.48□□□□□ -0.25
DEPDC4-202ENST00000378244 PGBD1Q96JS3 809 aa13.48□□□□□ -0.25
DEPDC4-202ENST00000378244 ADD3Q9UEY8 706 aaKnown RBP13.48□□□□□ -0.25
DEPDC4-202ENST00000378244 KIAA0100Q14667 2235 aaKnown RBP13.47□□□□□ -0.25
DEPDC4-202ENST00000378244 MEIS2O14770 477 aa13.47□□□□□ -0.25
DEPDC4-202ENST00000378244 ALDH5A1P51649 535 aaPredicted RBP13.47□□□□□ -0.25
DEPDC4-202ENST00000378244 HSD17B4P51659 736 aa13.47□□□□□ -0.25
DEPDC4-202ENST00000378244 ARHGEF16Q5VV41 709 aa13.47□□□□□ -0.25
DEPDC4-202ENST00000378244 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.47□□□□□ -0.25
DEPDC4-202ENST00000378244 ARMCX2Q7L311 632 aa13.47□□□□□ -0.25
DEPDC4-202ENST00000378244 RGS22Q8NE09 1264 aa13.47□□□□□ -0.25
DEPDC4-202ENST00000378244 RNF208Q9H0X6 261 aa13.47□□□□□ -0.25
DEPDC4-202ENST00000378244 UNC93B1Q9H1C4 597 aa13.47□□□□□ -0.25
DEPDC4-202ENST00000378244 KCNJ14Q9UNX9 436 aa13.47□□□□□ -0.25
DEPDC4-202ENST00000378244 DIS3Q9Y2L1 958 aaKnown RBP13.47□□□□□ -0.25
DEPDC4-202ENST00000378244 CCDC85CA6NKD9 419 aa13.47□□□□□ -0.25
DEPDC4-202ENST00000378244 SNAI1O95863 264 aaPredicted RBP13.47□□□□□ -0.25
DEPDC4-202ENST00000378244 CCND3P30281 292 aaPredicted RBP13.47□□□□□ -0.25
DEPDC4-202ENST00000378244 ZNF333Q96JL9 665 aa13.47□□□□□ -0.25
DEPDC4-202ENST00000378244 TMEM260Q9NX78 707 aa13.47□□□□□ -0.25
DEPDC4-202ENST00000378244 ZHX1Q9UKY1 873 aaPredicted RBP13.47□□□□□ -0.25
DEPDC4-202ENST00000378244 CNPY2Q9Y2B0 182 aa13.47□□□□□ -0.25
DEPDC4-202ENST00000378244 ZNFX1Q9P2E3 1918 aaKnown RBP13.47□□□□□ -0.25
DEPDC4-202ENST00000378244 MCM2P49736 904 aa13.46□□□□□ -0.25
DEPDC4-202ENST00000378244 ADCY7P51828 1080 aa13.46□□□□□ -0.25
DEPDC4-202ENST00000378244 MRPL12P52815 198 aaKnown RBP13.46□□□□□ -0.25
DEPDC4-202ENST00000378244 NLRP5P59047 1200 aa13.46□□□□□ -0.25
DEPDC4-202ENST00000378244 OLFML2BQ68BL8 750 aa13.46□□□□□ -0.25
DEPDC4-202ENST00000378244 RASGRP4Q8TDF6 673 aa13.46□□□□□ -0.25
DEPDC4-202ENST00000378244 ALG1Q9BT22 464 aa13.46□□□□□ -0.25
DEPDC4-202ENST00000378244 FOXD4L1Q9NU39 408 aa13.46□□□□□ -0.25
DEPDC4-202ENST00000378244 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.46□□□□□ -0.25
DEPDC4-202ENST00000378244 DNAH12Q6ZR08 3092 aa13.46□□□□□ -0.25
DEPDC4-202ENST00000378244 MYCLP12524 364 aaPredicted RBP13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms