RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 MAP3K15Q6ZN16 1313 aa11.56□□□□□ -0.56
RTN3-206ENST00000377819 PLB1Q6P1J6 1458 aa11.56□□□□□ -0.56
RTN3-206ENST00000377819 PPP2R5BQ15173 497 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 LRCH2Q5VUJ6 765 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 MCTP2Q6DN12 878 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 PIK3AP1Q6ZUJ8 805 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 SESTD1Q86VW0 696 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 TRIM58Q8NG06 486 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 CAPN11Q9UMQ6 739 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 MYO1FO00160 1098 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 BNIP3LO60238 219 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 LRMPQ12912 555 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 TMED1Q13445 227 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 RNF219Q5W0B1 726 aaPredicted RBP11.55□□□□□ -0.56
RTN3-206ENST00000377819 DYMQ7RTS9 669 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 PIP4K2CQ8TBX8 421 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 ALKBH8Q96BT7 664 aaKnown RBP11.55□□□□□ -0.56
RTN3-206ENST00000377819 LZTS2Q9BRK4 669 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 AS3MTQ9HBK9 375 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 H2AFZP0C0S5 128 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 ARL4AP40617 200 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 LRRC23Q53EV4 343 aaPredicted RBP11.55□□□□□ -0.56
RTN3-206ENST00000377819 GRAMD4Q6IC98 578 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 H2AFVQ71UI9 128 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 RRAGAQ7L523 313 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 JPH2Q9BR39 696 aaPredicted RBP11.55□□□□□ -0.56
RTN3-206ENST00000377819 TUBB6Q9BUF5 446 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 ASPSCR1Q9BZE9 553 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 ING2Q9H160 280 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 NRBP2Q9NSY0 501 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 NEMP1O14524 444 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 TRIM37O94972 964 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 CCDC159P0C7I6 412 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 ACTN1P12814 892 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 NMIQ13287 307 aaPredicted RBP11.55□□□□□ -0.56
RTN3-206ENST00000377819 TCP11X2Q5H9J9 407 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 ACSBG1Q96GR2 724 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 PAGR1Q9BTK6 254 aa11.55□□□□□ -0.56
RTN3-206ENST00000377819 PASKQ96RG2 1323 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 SYNRGQ9UMZ2 1314 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 KLC3Q6P597 504 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 TPH2Q8IWU9 490 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 DHX38Q92620 1227 aaKnown RBP11.54□□□□□ -0.56
RTN3-206ENST00000377819 SAR1BQ9Y6B6 198 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 V9GY48 417 aaPredicted RBP11.54□□□□□ -0.56
RTN3-206ENST00000377819 MROH1Q8NDA8 1641 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 TTC21BQ7Z4L5 1316 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 EFCAB8A8MWE9 144 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 IRS4O14654 1257 aaPredicted RBP11.54□□□□□ -0.56
RTN3-206ENST00000377819 KRT7P08729 469 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 SCG2P13521 617 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 GABPB1Q06547 395 aaPredicted RBP11.54□□□□□ -0.56
RTN3-206ENST00000377819 MED21Q13503 144 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 CAPRIN1Q14444 709 aaKnown RBP11.54□□□□□ -0.56
RTN3-206ENST00000377819 CEP85Q6P2H3 762 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 NCLNQ969V3 563 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 MTBPQ96DY7 904 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 MRPS26Q9BYN8 205 aaKnown RBP11.54□□□□□ -0.56
RTN3-206ENST00000377819 MED4Q9NPJ6 270 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 ARMCX3Q9UH62 379 aaPredicted RBP11.54□□□□□ -0.56
RTN3-206ENST00000377819 RASGRF2O14827 1237 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 PDE6CP51160 858 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 PTK2Q05397 1052 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 DLGAP5Q15398 846 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 EAPPQ56P03 285 aaPredicted RBP11.54□□□□□ -0.56
RTN3-206ENST00000377819 TTC38Q5R3I4 469 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 CFAP36Q96G28 342 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 NAIPQ13075 1403 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 KCNK3O14649 394 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 UFL1O94874 794 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 ATP2B4P23634 1241 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 GNGT1P63211 74 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 GPR162Q16538 588 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 KAZNQ674X7 775 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 CHMP1BQ7LBR1 199 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 CNBD1Q8NA66 436 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 PHKBQ93100 1093 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 TRIM15Q9C019 465 aa11.54□□□□□ -0.56
RTN3-206ENST00000377819 PRR23D1E9PI22 279 aaPredicted RBP11.53□□□□□ -0.56
RTN3-206ENST00000377819 POC1B-GALNT4F8VUJ3 575 aa11.53□□□□□ -0.56
RTN3-206ENST00000377819 ZNF197O14709 1029 aa11.53□□□□□ -0.56
RTN3-206ENST00000377819 PRR23D2P0DMB1 279 aaPredicted RBP11.53□□□□□ -0.56
RTN3-206ENST00000377819 YWHAHQ04917 246 aaPredicted RBP11.53□□□□□ -0.56
RTN3-206ENST00000377819 BCAS4Q8TDM0 211 aa11.53□□□□□ -0.56
RTN3-206ENST00000377819 RNF139Q8WU17 664 aa11.53□□□□□ -0.56
RTN3-206ENST00000377819 DISC1Q9NRI5 854 aa11.53□□□□□ -0.56
RTN3-206ENST00000377819 FAM207AQ9NSI2 230 aaPredicted RBP11.53□□□□□ -0.56
RTN3-206ENST00000377819 CPP00450 1065 aa11.53□□□□□ -0.56
RTN3-206ENST00000377819 ANXA1P04083 346 aa11.53□□□□□ -0.56
RTN3-206ENST00000377819 DDX5P17844 614 aaKnown RBP11.53□□□□□ -0.56
RTN3-206ENST00000377819 TCP1P17987 556 aaKnown RBP11.53□□□□□ -0.56
RTN3-206ENST00000377819 NNMTP40261 264 aa11.53□□□□□ -0.56
RTN3-206ENST00000377819 CARSP49589 748 aaKnown RBP11.53□□□□□ -0.56
RTN3-206ENST00000377819 CALCRLQ16602 461 aa11.53□□□□□ -0.56
RTN3-206ENST00000377819 TSHZ3Q63HK5 1081 aa11.53□□□□□ -0.56
RTN3-206ENST00000377819 SCG3Q8WXD2 468 aaKnown RBP11.53□□□□□ -0.56
RTN3-206ENST00000377819 SLF1Q9BQI6 1058 aa11.53□□□□□ -0.56
RTN3-206ENST00000377819 TBC1D7Q9P0N9 293 aa11.53□□□□□ -0.56
RTN3-206ENST00000377819 NFE2L3Q9Y4A8 694 aa11.53□□□□□ -0.56
RTN3-206ENST00000377819 TESPA1A2RU30 521 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms