RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 MYSM1Q5VVJ2 828 aa14.81□□□□□ -0.04
CBWD3-203ENST00000377344 KRT25Q7Z3Z0 450 aa14.81□□□□□ -0.04
CBWD3-203ENST00000377344 FCHSD1Q86WN1 690 aa14.81□□□□□ -0.04
CBWD3-203ENST00000377344 TNFRSF25Q93038 417 aa14.81□□□□□ -0.04
CBWD3-203ENST00000377344 MOV10L1Q9BXT6 1211 aaKnown RBP14.81□□□□□ -0.04
CBWD3-203ENST00000377344 SPDYE3A6NKU9 549 aa14.8□□□□□ -0.04
CBWD3-203ENST00000377344 SLC25A27O95847 323 aa14.8□□□□□ -0.04
CBWD3-203ENST00000377344 ERCC3P19447 782 aa14.8□□□□□ -0.04
CBWD3-203ENST00000377344 CLK2P49760 499 aaKnown RBP14.8□□□□□ -0.04
CBWD3-203ENST00000377344 VEGFBP49765 207 aa14.8□□□□□ -0.04
CBWD3-203ENST00000377344 DNM1Q05193 864 aaKnown RBP14.8□□□□□ -0.04
CBWD3-203ENST00000377344 NONOQ15233 471 aaKnown RBP eCLIP14.8□□□□□ -0.04
CBWD3-203ENST00000377344 RNF207Q6ZRF8 634 aa14.8□□□□□ -0.04
CBWD3-203ENST00000377344 CCAR1Q8IX12 1150 aaKnown RBP14.8□□□□□ -0.04
CBWD3-203ENST00000377344 ZFYVE28Q9HCC9 887 aa14.8□□□□□ -0.04
CBWD3-203ENST00000377344 CPA4Q9UI42 421 aa14.8□□□□□ -0.04
CBWD3-203ENST00000377344 NOL7Q9UMY1 257 aaKnown RBP14.8□□□□□ -0.04
CBWD3-203ENST00000377344 PIK3CDO00329 1044 aa14.8□□□□□ -0.04
CBWD3-203ENST00000377344 CCNA1P78396 465 aa14.8□□□□□ -0.04
CBWD3-203ENST00000377344 CEBPZQ03701 1054 aaKnown RBP14.8□□□□□ -0.04
CBWD3-203ENST00000377344 INF2Q27J81 1249 aa14.8□□□□□ -0.04
CBWD3-203ENST00000377344 CHST13Q8NET6 341 aa14.8□□□□□ -0.04
CBWD3-203ENST00000377344 TFIP11Q9UBB9 837 aaKnown RBP14.8□□□□□ -0.04
CBWD3-203ENST00000377344 FBXO40Q9UH90 709 aa14.8□□□□□ -0.04
CBWD3-203ENST00000377344 COPB2P35606 906 aa14.79□□□□□ -0.04
CBWD3-203ENST00000377344 AP3B2Q13367 1082 aa14.79□□□□□ -0.04
CBWD3-203ENST00000377344 REM2Q8IYK8 340 aaPredicted RBP14.79□□□□□ -0.04
CBWD3-203ENST00000377344 ANKRD35Q8N283 1001 aa14.79□□□□□ -0.04
CBWD3-203ENST00000377344 ZNF396Q96N95 335 aaPredicted RBP14.79□□□□□ -0.04
CBWD3-203ENST00000377344 GBP4Q96PP9 640 aa14.79□□□□□ -0.04
CBWD3-203ENST00000377344 BAG4O95429 457 aaKnown RBP14.78□□□□□ -0.04
CBWD3-203ENST00000377344 ALDH1A1P00352 501 aa14.78□□□□□ -0.04
CBWD3-203ENST00000377344 FOSP01100 380 aaPredicted RBP14.78□□□□□ -0.04
CBWD3-203ENST00000377344 HSD17B4P51659 736 aa14.78□□□□□ -0.04
CBWD3-203ENST00000377344 RPS6P62753 249 aaKnown RBP14.78□□□□□ -0.04
CBWD3-203ENST00000377344 KRT85P78386 507 aa14.78□□□□□ -0.04
CBWD3-203ENST00000377344 CRHR2Q13324 411 aa14.78□□□□□ -0.04
CBWD3-203ENST00000377344 RILPL1Q5EBL4 403 aa14.78□□□□□ -0.04
CBWD3-203ENST00000377344 MCTP2Q6DN12 878 aa14.78□□□□□ -0.04
CBWD3-203ENST00000377344 SLC30A10Q6XR72 485 aa14.78□□□□□ -0.04
CBWD3-203ENST00000377344 TBCKQ8TEA7 893 aa14.78□□□□□ -0.04
CBWD3-203ENST00000377344 ANO3Q9BYT9 981 aa14.78□□□□□ -0.04
CBWD3-203ENST00000377344 FTOQ9C0B1 505 aaKnown RBP eCLIP14.78□□□□□ -0.04
CBWD3-203ENST00000377344 MORF4L1Q9UBU8 362 aa14.78□□□□□ -0.04
CBWD3-203ENST00000377344 CNPY2Q9Y2B0 182 aa14.78□□□□□ -0.04
CBWD3-203ENST00000377344 TLR2O60603 784 aa14.78□□□□□ -0.04
CBWD3-203ENST00000377344 ECM2O94769 699 aaPredicted RBP14.78□□□□□ -0.04
CBWD3-203ENST00000377344 BAATQ14032 418 aaPredicted RBP14.78□□□□□ -0.04
CBWD3-203ENST00000377344 NBR1Q14596 966 aa14.78□□□□□ -0.04
CBWD3-203ENST00000377344 FAM110CQ1W6H9 321 aa14.78□□□□□ -0.04
CBWD3-203ENST00000377344 PORCNQ9H237 461 aa14.78□□□□□ -0.04
CBWD3-203ENST00000377344 MROH8Q9H579 483 aa14.78□□□□□ -0.04
CBWD3-203ENST00000377344 EFCC1Q9HA90 598 aa14.78□□□□□ -0.04
CBWD3-203ENST00000377344 A1CFQ9NQ94 594 aaKnown RBP14.78□□□□□ -0.04
CBWD3-203ENST00000377344 RBBP6Q7Z6E9 1792 aaKnown RBP14.77□□□□□ -0.04
CBWD3-203ENST00000377344 MYH15Q9Y2K3 1946 aa14.77□□□□□ -0.04
CBWD3-203ENST00000377344 CA12O43570 354 aa14.77□□□□□ -0.05
CBWD3-203ENST00000377344 MAP2K2P36507 400 aa14.77□□□□□ -0.05
CBWD3-203ENST00000377344 TOB1P50616 345 aaPredicted RBP14.77□□□□□ -0.05
CBWD3-203ENST00000377344 C1QTNF8P60827 252 aa14.77□□□□□ -0.05
CBWD3-203ENST00000377344 LETM2Q2VYF4 491 aa14.77□□□□□ -0.05
CBWD3-203ENST00000377344 NEK8Q86SG6 692 aa14.77□□□□□ -0.05
CBWD3-203ENST00000377344 TEX2Q8IWB9 1127 aa14.77□□□□□ -0.05
CBWD3-203ENST00000377344 SAMD3Q8N6K7 520 aa14.77□□□□□ -0.05
CBWD3-203ENST00000377344 SHCBP1Q8NEM2 672 aa14.77□□□□□ -0.05
CBWD3-203ENST00000377344 SYTL5Q8TDW5 730 aaPredicted RBP14.77□□□□□ -0.05
CBWD3-203ENST00000377344 USP28Q96RU2 1077 aa14.77□□□□□ -0.05
CBWD3-203ENST00000377344 R3HDMLQ9H3Y0 253 aa14.77□□□□□ -0.05
CBWD3-203ENST00000377344 EHMT1Q9H9B1 1298 aa14.77□□□□□ -0.05
CBWD3-203ENST00000377344 MAP3K20Q9NYL2 800 aaKnown RBP14.77□□□□□ -0.05
CBWD3-203ENST00000377344 CYP39A1Q9NYL5 469 aa14.77□□□□□ -0.05
CBWD3-203ENST00000377344 CFAP45Q9UL16 551 aa14.77□□□□□ -0.05
CBWD3-203ENST00000377344 PFASO15067 1338 aa14.76□□□□□ -0.05
CBWD3-203ENST00000377344 FIBPO43427 364 aa14.76□□□□□ -0.05
CBWD3-203ENST00000377344 HSPA6P17066 643 aa14.76□□□□□ -0.05
CBWD3-203ENST00000377344 UBXN2AP68543 259 aa14.76□□□□□ -0.05
CBWD3-203ENST00000377344 KCTD2Q14681 263 aa14.76□□□□□ -0.05
CBWD3-203ENST00000377344 TTC38Q5R3I4 469 aa14.76□□□□□ -0.05
CBWD3-203ENST00000377344 GDPD2Q9HCC8 539 aa14.76□□□□□ -0.05
CBWD3-203ENST00000377344 COL20A1Q9P218 1284 aa14.76□□□□□ -0.05
CBWD3-203ENST00000377344 CLIC4Q9Y696 253 aa14.76□□□□□ -0.05
CBWD3-203ENST00000377344 ADGRA2Q96PE1 1338 aa14.76□□□□□ -0.05
CBWD3-203ENST00000377344 CCNT1O60563 726 aaKnown RBP14.76□□□□□ -0.05
CBWD3-203ENST00000377344 BCRP11274 1271 aa14.76□□□□□ -0.05
CBWD3-203ENST00000377344 FCER1AP12319 257 aa14.76□□□□□ -0.05
CBWD3-203ENST00000377344 TRAPPC10P48553 1259 aa14.76□□□□□ -0.05
CBWD3-203ENST00000377344 GHRHRQ02643 423 aa14.76□□□□□ -0.05
CBWD3-203ENST00000377344 SF3A1Q15459 793 aaKnown RBP14.76□□□□□ -0.05
CBWD3-203ENST00000377344 ANO1Q5XXA6 986 aa14.76□□□□□ -0.05
CBWD3-203ENST00000377344 ATL3Q6DD88 541 aa14.76□□□□□ -0.05
CBWD3-203ENST00000377344 TAAR1Q96RJ0 339 aa14.76□□□□□ -0.05
CBWD3-203ENST00000377344 MMP19Q99542 508 aa14.76□□□□□ -0.05
CBWD3-203ENST00000377344 PCDHB6Q9Y5E3 794 aa14.76□□□□□ -0.05
CBWD3-203ENST00000377344 IVNS1ABPQ9Y6Y0 642 aa14.76□□□□□ -0.05
CBWD3-203ENST00000377344 MCM7P33993 719 aa14.75□□□□□ -0.05
CBWD3-203ENST00000377344 ZNF174Q15697 407 aa14.75□□□□□ -0.05
CBWD3-203ENST00000377344 C17orf99Q6UX52 265 aa14.75□□□□□ -0.05
CBWD3-203ENST00000377344 SPATA32Q96LK8 384 aa14.75□□□□□ -0.05
CBWD3-203ENST00000377344 PURBQ96QR8 312 aaKnown RBP14.75□□□□□ -0.05
CBWD3-203ENST00000377344 RMDN3Q96TC7 470 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms