RNA–Protein interactions for RNA: ENST00000377153.5

UBE4B-203, Transcript of ubiquitination factor E4B, humanhuman

TSL 3 BASIC

Gene UBE4B, Length 1,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-203ENST00000377153 CDC27P30260 824 aa16.74■□□□□ 0.27
UBE4B-203ENST00000377153 CYP2C19P33261 490 aa16.74■□□□□ 0.27
UBE4B-203ENST00000377153 RPS6P62753 249 aaKnown RBP16.74■□□□□ 0.27
UBE4B-203ENST00000377153 C1QBPQ07021 282 aaKnown RBP16.74■□□□□ 0.27
UBE4B-203ENST00000377153 STK3Q13188 491 aa16.74■□□□□ 0.27
UBE4B-203ENST00000377153 RABEP1Q15276 862 aa16.74■□□□□ 0.27
UBE4B-203ENST00000377153 NOL8Q76FK4 1167 aaKnown RBP16.74■□□□□ 0.27
UBE4B-203ENST00000377153 SAMD3Q8N6K7 520 aa16.74■□□□□ 0.27
UBE4B-203ENST00000377153 FAM133AQ8N9E0 248 aa16.74■□□□□ 0.27
UBE4B-203ENST00000377153 IL27Q8NEV9 243 aa16.74■□□□□ 0.27
UBE4B-203ENST00000377153 CUL5Q93034 780 aa16.74■□□□□ 0.27
UBE4B-203ENST00000377153 BACH2Q9BYV9 841 aa16.74■□□□□ 0.27
UBE4B-203ENST00000377153 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.74■□□□□ 0.273e-6■■■■□ 23.5
UBE4B-203ENST00000377153 MAP3K20Q9NYL2 800 aaKnown RBP16.74■□□□□ 0.27
UBE4B-203ENST00000377153 LOC102724159A0A0B4J2E5 919 aa16.73■□□□□ 0.27
UBE4B-203ENST00000377153 ST18O60284 1047 aa16.73■□□□□ 0.27
UBE4B-203ENST00000377153 CAPN15O75808 1086 aa16.73■□□□□ 0.27
UBE4B-203ENST00000377153 CNGA1P29973 690 aa16.73■□□□□ 0.27
UBE4B-203ENST00000377153 ADD1P35611 737 aaKnown RBP16.73■□□□□ 0.27
UBE4B-203ENST00000377153 CCT2P78371 535 aaKnown RBP16.73■□□□□ 0.27
UBE4B-203ENST00000377153 CNTN2Q02246 1040 aa16.73■□□□□ 0.27
UBE4B-203ENST00000377153 CACNB2Q08289 660 aaPredicted RBP16.73■□□□□ 0.27
UBE4B-203ENST00000377153 TRIM32Q13049 653 aa16.73■□□□□ 0.27
UBE4B-203ENST00000377153 PWP2Q15269 919 aaKnown RBP16.73■□□□□ 0.27
UBE4B-203ENST00000377153 MTFR1Q15390 333 aa16.73■□□□□ 0.27
UBE4B-203ENST00000377153 MAP3K21Q5TCX8 1036 aa16.73■□□□□ 0.27
UBE4B-203ENST00000377153 PPP1R18Q6NYC8 613 aa16.73■□□□□ 0.27
UBE4B-203ENST00000377153 LARP6Q9BRS8 491 aaKnown RBP16.73■□□□□ 0.27
UBE4B-203ENST00000377153 UNC93B1Q9H1C4 597 aa16.73■□□□□ 0.27
UBE4B-203ENST00000377153 NRBP1Q9UHY1 535 aa16.73■□□□□ 0.27
UBE4B-203ENST00000377153 hCG_1642624A0A1W2PR95 340 aa16.72■□□□□ 0.27
UBE4B-203ENST00000377153 GCOM1H8Y6P7 765 aaPredicted RBP16.72■□□□□ 0.27
UBE4B-203ENST00000377153 MSCO60682 206 aa16.72■□□□□ 0.27
UBE4B-203ENST00000377153 POLR2MP0CAP2 368 aa16.72■□□□□ 0.27
UBE4B-203ENST00000377153 HOXD11P31277 338 aaPredicted RBP16.72■□□□□ 0.27
UBE4B-203ENST00000377153 SOX10P56693 466 aa16.72■□□□□ 0.27
UBE4B-203ENST00000377153 MAMDC4Q6UXC1 1216 aa16.72■□□□□ 0.27
UBE4B-203ENST00000377153 ARMCX2Q7L311 632 aa16.72■□□□□ 0.27
UBE4B-203ENST00000377153 DNERQ8NFT8 737 aa16.72■□□□□ 0.27
UBE4B-203ENST00000377153 CCDC12Q8WUD4 166 aaPredicted RBP16.72■□□□□ 0.27
UBE4B-203ENST00000377153 TBC1D32Q96NH3 1257 aa16.72■□□□□ 0.27
UBE4B-203ENST00000377153 RNF26Q9BY78 433 aaPredicted RBP16.72■□□□□ 0.27
UBE4B-203ENST00000377153 NCOA5Q9HCD5 579 aaKnown RBP16.72■□□□□ 0.27
UBE4B-203ENST00000377153 TPCN1Q9ULQ1 816 aa16.72■□□□□ 0.27
UBE4B-203ENST00000377153 V9GY48 417 aaPredicted RBP16.72■□□□□ 0.27
UBE4B-203ENST00000377153 GJB1P08034 283 aa16.71■□□□□ 0.27
UBE4B-203ENST00000377153 CYBAP13498 195 aa16.71■□□□□ 0.27
UBE4B-203ENST00000377153 IFNAR1P17181 557 aa16.71■□□□□ 0.27
UBE4B-203ENST00000377153 ALDH5A1P51649 535 aaPredicted RBP16.71■□□□□ 0.27
UBE4B-203ENST00000377153 NAPAP54920 295 aa16.71■□□□□ 0.27
UBE4B-203ENST00000377153 SMARCC2Q8TAQ2 1214 aa16.71■□□□□ 0.27
UBE4B-203ENST00000377153 GPKOWQ92917 476 aaPredicted RBP eCLIP16.71■□□□□ 0.27
UBE4B-203ENST00000377153 SLC26A6Q9BXS9 759 aa16.71■□□□□ 0.27
UBE4B-203ENST00000377153 ABHD16BQ9H3Z7 469 aa16.71■□□□□ 0.27
UBE4B-203ENST00000377153 PAK6Q9NQU5 681 aaPredicted RBP16.71■□□□□ 0.27
UBE4B-203ENST00000377153 FAM217BQ9NTX9 383 aaPredicted RBP16.71■□□□□ 0.27
UBE4B-203ENST00000377153 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.71■□□□□ 0.27
UBE4B-203ENST00000377153 ZHX1Q9UKY1 873 aaPredicted RBP16.71■□□□□ 0.27
UBE4B-203ENST00000377153 KIAA1217Q5T5P2 1943 aa16.7■□□□□ 0.26
UBE4B-203ENST00000377153 SOWAHBA6NEL2 793 aa16.7■□□□□ 0.26
UBE4B-203ENST00000377153 PRPF3O43395 683 aaKnown RBP16.7■□□□□ 0.26
UBE4B-203ENST00000377153 PFKFB2O60825 505 aa16.7■□□□□ 0.26
UBE4B-203ENST00000377153 SCG2P13521 617 aa16.7■□□□□ 0.26
UBE4B-203ENST00000377153 CAPN2P17655 700 aa16.7■□□□□ 0.26
UBE4B-203ENST00000377153 CCND3P30281 292 aaPredicted RBP16.7■□□□□ 0.26
UBE4B-203ENST00000377153 HSD17B4P51659 736 aa16.7■□□□□ 0.26
UBE4B-203ENST00000377153 PDE4DQ08499 809 aa16.7■□□□□ 0.26
UBE4B-203ENST00000377153 SSRP1Q08945 709 aaKnown RBP16.7■□□□□ 0.26
UBE4B-203ENST00000377153 FUT2Q10981 343 aa16.7■□□□□ 0.26
UBE4B-203ENST00000377153 PFKFB3Q16875 520 aaPredicted RBP16.7■□□□□ 0.26
UBE4B-203ENST00000377153 WWC2Q6AWC2 1192 aa16.7■□□□□ 0.26
UBE4B-203ENST00000377153 SYTL5Q8TDW5 730 aaPredicted RBP16.7■□□□□ 0.26
UBE4B-203ENST00000377153 NSUN6Q8TEA1 469 aaKnown RBP16.7■□□□□ 0.26
UBE4B-203ENST00000377153 PHKBQ93100 1093 aa16.7■□□□□ 0.26
UBE4B-203ENST00000377153 DEFB118Q96PH6 123 aa16.7■□□□□ 0.26
UBE4B-203ENST00000377153 RMDN3Q96TC7 470 aa16.7■□□□□ 0.26
UBE4B-203ENST00000377153 OPLAHO14841 1288 aa16.69■□□□□ 0.26
UBE4B-203ENST00000377153 SEPT4O43236 478 aa16.69■□□□□ 0.26
UBE4B-203ENST00000377153 AKR1A1P14550 325 aa16.69■□□□□ 0.26
UBE4B-203ENST00000377153 HOXA13P31271 388 aaPredicted RBP16.69■□□□□ 0.26
UBE4B-203ENST00000377153 ADCY7P51828 1080 aa16.69■□□□□ 0.26
UBE4B-203ENST00000377153 GHRHRQ02643 423 aa16.69■□□□□ 0.26
UBE4B-203ENST00000377153 ARHGEF16Q5VV41 709 aa16.69■□□□□ 0.26
UBE4B-203ENST00000377153 TEX2Q8IWB9 1127 aa16.69■□□□□ 0.26
UBE4B-203ENST00000377153 CCDC148Q8NFR7 591 aa16.69■□□□□ 0.26
UBE4B-203ENST00000377153 U2AF1L4Q8WU68 220 aaKnown RBP16.69■□□□□ 0.26
UBE4B-203ENST00000377153 FGD4Q96M96 766 aa16.69■□□□□ 0.26
UBE4B-203ENST00000377153 GLT8D2Q9H1C3 349 aa16.69■□□□□ 0.26
UBE4B-203ENST00000377153 PSTPIP2Q9H939 334 aa16.69■□□□□ 0.26
UBE4B-203ENST00000377153 BARHL2Q9NY43 387 aa16.69■□□□□ 0.26
UBE4B-203ENST00000377153 LIMCH1Q9UPQ0 1083 aa16.69■□□□□ 0.26
UBE4B-203ENST00000377153 KIAA0100Q14667 2235 aaKnown RBP16.69■□□□□ 0.26
UBE4B-203ENST00000377153 DEXIO95424 95 aa16.68■□□□□ 0.26
UBE4B-203ENST00000377153 IGHA2P01877 340 aa16.68■□□□□ 0.26
UBE4B-203ENST00000377153 GJA8P48165 433 aa16.68■□□□□ 0.26
UBE4B-203ENST00000377153 SCRN1Q12765 414 aa16.68■□□□□ 0.26
UBE4B-203ENST00000377153 NTRK3Q16288 839 aa16.68■□□□□ 0.26
UBE4B-203ENST00000377153 FCHSD1Q86WN1 690 aa16.68■□□□□ 0.26
UBE4B-203ENST00000377153 GTF3C6Q969F1 213 aa16.68■□□□□ 0.26
UBE4B-203ENST00000377153 KIF2CQ99661 725 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms