RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 LRRC37A2A6NM11 1700 aa24.66■■□□□ 1.54
VSX1-201ENST00000376707 B4E1Z4 1266 aa24.65■■□□□ 1.54
VSX1-201ENST00000376707 PDE4AP27815 886 aa24.65■■□□□ 1.54
VSX1-201ENST00000376707 MFSD5Q6N075 450 aa24.65■■□□□ 1.54
VSX1-201ENST00000376707 ZSCAN10Q96SZ4 725 aaPredicted RBP24.65■■□□□ 1.54
VSX1-201ENST00000376707 MPHOSPH6Q99547 160 aaKnown RBP24.65■■□□□ 1.54
VSX1-201ENST00000376707 COL6A3P12111 3177 aa24.64■■□□□ 1.54
VSX1-201ENST00000376707 RPS6P62753 249 aaKnown RBP24.64■■□□□ 1.54
VSX1-201ENST00000376707 DUSP28Q4G0W2 176 aa24.64■■□□□ 1.54
VSX1-201ENST00000376707 TMEM63BQ5T3F8 832 aa24.64■■□□□ 1.54
VSX1-201ENST00000376707 UBA5Q9GZZ9 404 aa24.64■■□□□ 1.54
VSX1-201ENST00000376707 PDE4DQ08499 809 aa24.63■■□□□ 1.53
VSX1-201ENST00000376707 PPIGQ13427 754 aaKnown RBP eCLIP24.63■■□□□ 1.53
VSX1-201ENST00000376707 ITGA7Q13683 1181 aa24.63■■□□□ 1.53
VSX1-201ENST00000376707 USH1GQ495M9 461 aa24.63■■□□□ 1.53
VSX1-201ENST00000376707 TMEM199Q8N511 208 aa24.63■■□□□ 1.53
VSX1-201ENST00000376707 WDR11Q9BZH6 1224 aa24.63■■□□□ 1.53
VSX1-201ENST00000376707 PPP1R12CQ9BZL4 782 aa24.63■■□□□ 1.53
VSX1-201ENST00000376707 KRT23Q9C075 422 aa24.63■■□□□ 1.53
VSX1-201ENST00000376707 CPVLQ9H3G5 476 aa24.63■■□□□ 1.53
VSX1-201ENST00000376707 CNNM2Q9H8M5 875 aa24.63■■□□□ 1.53
VSX1-201ENST00000376707 LAMA4Q16363 1823 aa24.63■■□□□ 1.53
VSX1-201ENST00000376707 IRX6P78412 446 aaPredicted RBP24.62■■□□□ 1.53
VSX1-201ENST00000376707 ENAHQ8N8S7 591 aaPredicted RBP24.62■■□□□ 1.53
VSX1-201ENST00000376707 SLC43A3Q8NBI5 491 aa24.62■■□□□ 1.53
VSX1-201ENST00000376707 ANKS1AQ92625 1134 aa24.62■■□□□ 1.53
VSX1-201ENST00000376707 SEZ6LQ9BYH1 1024 aa24.62■■□□□ 1.53
VSX1-201ENST00000376707 SEMA6BQ9H3T3 888 aa24.62■■□□□ 1.53
VSX1-201ENST00000376707 ZSWIM5Q9P217 1185 aa24.62■■□□□ 1.53
VSX1-201ENST00000376707 LCTP09848 1927 aa24.62■■□□□ 1.53
VSX1-201ENST00000376707 TNKSO95271 1327 aa24.61■■□□□ 1.53
VSX1-201ENST00000376707 CD4P01730 458 aa24.61■■□□□ 1.53
VSX1-201ENST00000376707 CDC37Q16543 378 aaPredicted RBP24.61■■□□□ 1.53
VSX1-201ENST00000376707 ASPRV1Q53RT3 343 aa24.61■■□□□ 1.53
VSX1-201ENST00000376707 TTC22Q5TAA0 569 aa24.61■■□□□ 1.53
VSX1-201ENST00000376707 DNERQ8NFT8 737 aa24.61■■□□□ 1.53
VSX1-201ENST00000376707 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.61■■□□□ 1.53
VSX1-201ENST00000376707 UBAC1Q9BSL1 405 aa24.61■■□□□ 1.53
VSX1-201ENST00000376707 B4DLN1 442 aa24.6■■□□□ 1.53
VSX1-201ENST00000376707 GSPT1P15170 499 aaKnown RBP24.6■■□□□ 1.53
VSX1-201ENST00000376707 CSF2RAP15509 400 aa24.6■■□□□ 1.53
VSX1-201ENST00000376707 MRPL12P52815 198 aaKnown RBP24.6■■□□□ 1.53
VSX1-201ENST00000376707 ADGRF4Q8IZF3 695 aa24.6■■□□□ 1.53
VSX1-201ENST00000376707 GRIN2DO15399 1336 aa24.6■■□□□ 1.53
VSX1-201ENST00000376707 LAMA2P24043 3122 aaKnown RBP24.59■■□□□ 1.53
VSX1-201ENST00000376707 RBM47A0AV96 593 aaKnown RBP24.59■■□□□ 1.53
VSX1-201ENST00000376707 DHX16O60231 1041 aaKnown RBP24.59■■□□□ 1.53
VSX1-201ENST00000376707 CPT1AP50416 773 aa24.59■■□□□ 1.53
VSX1-201ENST00000376707 PSMC6P62333 389 aa24.59■■□□□ 1.53
VSX1-201ENST00000376707 RGS22Q8NE09 1264 aa24.59■■□□□ 1.53
VSX1-201ENST00000376707 CDX2Q99626 313 aaPredicted RBP24.59■■□□□ 1.53
VSX1-201ENST00000376707 IL25Q9H293 177 aa24.59■■□□□ 1.53
VSX1-201ENST00000376707 POLR3EQ9NVU0 708 aa24.59■■□□□ 1.53
VSX1-201ENST00000376707 ABCB11O95342 1321 aa24.59■■□□□ 1.53
VSX1-201ENST00000376707 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.58■■□□□ 1.53
VSX1-201ENST00000376707 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.58■■□□□ 1.53
VSX1-201ENST00000376707 PARP1P09874 1014 aaKnown RBP24.58■■□□□ 1.53
VSX1-201ENST00000376707 EDNRBP24530 442 aa24.58■■□□□ 1.53
VSX1-201ENST00000376707 CYP2C18P33260 490 aa24.58■■□□□ 1.53
VSX1-201ENST00000376707 PPP2R5BQ15173 497 aa24.58■■□□□ 1.53
VSX1-201ENST00000376707 OR6J1Q8NGC5 347 aa24.58■■□□□ 1.53
VSX1-201ENST00000376707 TTYH1Q9H313 450 aaPredicted RBP24.58■■□□□ 1.53
VSX1-201ENST00000376707 HIPK3Q9H422 1215 aa24.58■■□□□ 1.53
VSX1-201ENST00000376707 DLL1O00548 723 aa24.57■■□□□ 1.52
VSX1-201ENST00000376707 NKRFO15226 690 aaKnown RBP eCLIP24.57■■□□□ 1.52
VSX1-201ENST00000376707 BRDTQ58F21 947 aaPredicted RBP24.57■■□□□ 1.52
VSX1-201ENST00000376707 TMEM240Q5SV17 173 aa24.57■■□□□ 1.52
VSX1-201ENST00000376707 IFIT1BQ5T764 474 aaKnown RBP24.57■■□□□ 1.52
VSX1-201ENST00000376707 PSRC1Q6PGN9 363 aaPredicted RBP24.57■■□□□ 1.52
VSX1-201ENST00000376707 C16orf59Q7L2K0 433 aa24.57■■□□□ 1.52
VSX1-201ENST00000376707 SCFD2Q8WU76 684 aa24.57■■□□□ 1.52
VSX1-201ENST00000376707 MAF1Q9H063 256 aa24.57■■□□□ 1.52
VSX1-201ENST00000376707 TRPV6Q9H1D0 765 aa24.57■■□□□ 1.52
VSX1-201ENST00000376707 GPHNQ9NQX3 736 aaPredicted RBP24.57■■□□□ 1.52
VSX1-201ENST00000376707 RAD50Q92878 1312 aa24.57■■□□□ 1.52
VSX1-201ENST00000376707 TMEM265A0A087WTH1 108 aa24.56■■□□□ 1.52
VSX1-201ENST00000376707 MYL3P08590 195 aa24.56■■□□□ 1.52
VSX1-201ENST00000376707 ACRP10323 421 aa24.56■■□□□ 1.52
VSX1-201ENST00000376707 QRICH1Q2TAL8 776 aa24.56■■□□□ 1.52
VSX1-201ENST00000376707 RUFY2Q8WXA3 655 aa24.56■■□□□ 1.52
VSX1-201ENST00000376707 VAT1LQ9HCJ6 419 aa24.56■■□□□ 1.52
VSX1-201ENST00000376707 B4GALT4O60513 344 aa24.55■■□□□ 1.52
VSX1-201ENST00000376707 PURAQ00577 322 aaKnown RBP24.55■■□□□ 1.52
VSX1-201ENST00000376707 TRDNQ13061 729 aa24.55■■□□□ 1.52
VSX1-201ENST00000376707 ZNF365Q70YC5 407 aa24.55■■□□□ 1.52
VSX1-201ENST00000376707 FBXO11Q86XK2 927 aa24.55■■□□□ 1.52
VSX1-201ENST00000376707 MCF2L2Q86YR7 1114 aa24.55■■□□□ 1.52
VSX1-201ENST00000376707 IL23AQ9NPF7 189 aa24.55■■□□□ 1.52
VSX1-201ENST00000376707 TXNP10599 105 aaKnown RBP24.54■■□□□ 1.52
VSX1-201ENST00000376707 DNAJB2P25686 324 aa24.54■■□□□ 1.52
VSX1-201ENST00000376707 MYLIPQ8WY64 445 aa24.54■■□□□ 1.52
VSX1-201ENST00000376707 TBC1D5Q92609 795 aa24.54■■□□□ 1.52
VSX1-201ENST00000376707 MTG1Q9BT17 334 aaPredicted RBP24.54■■□□□ 1.52
VSX1-201ENST00000376707 NOC4LQ9BVI4 516 aaKnown RBP24.54■■□□□ 1.52
VSX1-201ENST00000376707 ALDH8A1Q9H2A2 487 aaPredicted RBP24.54■■□□□ 1.52
VSX1-201ENST00000376707 JMJD4Q9H9V9 463 aa24.54■■□□□ 1.52
VSX1-201ENST00000376707 MRPL11Q9Y3B7 192 aaKnown RBP24.54■■□□□ 1.52
VSX1-201ENST00000376707 TTLL4Q14679 1199 aa24.53■■□□□ 1.52
VSX1-201ENST00000376707 SYTL5Q8TDW5 730 aaPredicted RBP24.53■■□□□ 1.52
VSX1-201ENST00000376707 NSUN6Q8TEA1 469 aaKnown RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms